RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 TMC1Q08422 150 aaPredicted RBP2.56□□□□□ -2
snR35snR35 UTP23Q12339 254 aaKnown RBP2.56□□□□□ -2
snR35snR35 RPL21BQ12672 160 aaKnown RBP2.56□□□□□ -2
snR35snR35 MHP1P43638 1398 aa2.56□□□□□ -2
snR35snR35 ASP3-2P0CX77 362 aa2.55□□□□□ -2
snR35snR35 ASP3-3P0CX78 362 aa2.55□□□□□ -2
snR35snR35 ASP3-4P0CX79 362 aa2.55□□□□□ -2
snR35snR35 ASP3-1P0CZ17 362 aa2.55□□□□□ -2
snR35snR35 FRS2P15625 503 aaKnown RBP2.55□□□□□ -2
snR35snR35 CSM1P25651 190 aa2.55□□□□□ -2
snR35snR35 ICL1P28240 557 aaPredicted RBP2.55□□□□□ -2
snR35snR35 CBF5P33322 483 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
snR35snR35 YKL187CP34231 750 aa2.55□□□□□ -2
snR35snR35 MCH2P36032 473 aa2.55□□□□□ -2
snR35snR35 STB1P42845 420 aa2.55□□□□□ -2
snR35snR35 YPS5P53057 165 aa2.55□□□□□ -2
snR35snR35 KTR6P54070 446 aa2.55□□□□□ -2
snR35snR35 SED5Q01590 340 aa2.55□□□□□ -2
snR35snR35 TSA2Q04120 196 aa2.55□□□□□ -2
snR35snR35 YDR115WQ04598 105 aa2.55□□□□□ -2
snR35snR35 KAP95Q06142 861 aaKnown RBP2.55□□□□□ -2
snR35snR35 GPN3Q06543 272 aa2.55□□□□□ -2
snR35snR35 MMT2Q08970 484 aa2.55□□□□□ -2
snR35snR35 YPL245WQ12179 454 aaKnown RBP2.55□□□□□ -2
snR35snR35 PRP46Q12417 451 aaPredicted RBP2.55□□□□□ -2
snR35snR35 RPL24AP04449 155 aaKnown RBP2.54□□□□□ -2
snR35snR35 RPL31AP0C2H8 113 aaKnown RBP2.54□□□□□ -2
snR35snR35 SPS100P13130 326 aa2.54□□□□□ -2
snR35snR35 BGL2P15703 313 aaKnown RBP2.54□□□□□ -2
snR35snR35 ERD1P16151 362 aa2.54□□□□□ -2
snR35snR35 IFM1P25038 676 aa2.54□□□□□ -2
snR35snR35 RPL16BP26785 198 aaKnown RBP2.54□□□□□ -2
snR35snR35 GCG1P32656 232 aaKnown RBP2.54□□□□□ -2
snR35snR35 TIP20P33891 701 aa2.54□□□□□ -2
snR35snR35 RPC37P36121 282 aa2.54□□□□□ -2
snR35snR35 TDA11P38854 504 aa2.54□□□□□ -2
snR35snR35 RCY1P39531 840 aa2.54□□□□□ -2
snR35snR35 MRX5P47007 382 aa2.54□□□□□ -2
snR35snR35 UBC13P52490 153 aa2.54□□□□□ -2
snR35snR35 TPC1P53257 314 aa2.54□□□□□ -2
snR35snR35 NRM1P53718 249 aa2.54□□□□□ -2
snR35snR35 TPS1Q00764 495 aaKnown RBP2.54□□□□□ -2
snR35snR35 HAL1Q01766 294 aa2.54□□□□□ -2
snR35snR35 MRPS16Q02608 121 aa2.54□□□□□ -2
snR35snR35 RMI1Q02685 241 aa2.54□□□□□ -2
snR35snR35 MRX11Q03079 207 aa2.54□□□□□ -2
snR35snR35 SRO7Q12038 1033 aa2.54□□□□□ -2
snR35snR35 ERP3Q12403 225 aa2.54□□□□□ -2
snR35snR35 PSK1P31374 1356 aa2.53□□□□□ -2
snR35snR35 CBP6P07253 162 aaPredicted RBP2.53□□□□□ -2
snR35snR35 SPS19P32573 292 aaKnown RBP2.53□□□□□ -2
snR35snR35 YKL063CP35725 167 aa2.53□□□□□ -2
snR35snR35 MRPL27P36526 146 aaPredicted RBP2.53□□□□□ -2
snR35snR35 MRPL37P36532 105 aa2.53□□□□□ -2
snR35snR35 GGC1P38988 300 aa2.53□□□□□ -2
snR35snR35 GDS1P41913 522 aa2.53□□□□□ -2
snR35snR35 FMP33P46998 180 aa2.53□□□□□ -2
snR35snR35 SDS23P53172 527 aa2.53□□□□□ -2
snR35snR35 MPP6P53725 186 aaPredicted RBP2.53□□□□□ -2
snR35snR35 ADD37Q03233 198 aa2.53□□□□□ -2
snR35snR35 CSI1Q04368 295 aa2.53□□□□□ -2
snR35snR35 GMC2Q06201 188 aa2.53□□□□□ -2
snR35snR35 YLR446WQ06204 433 aa2.53□□□□□ -2
snR35snR35 YOR376WQ08900 122 aa2.53□□□□□ -2
snR35snR35 RRP42Q12277 265 aaPredicted RBP2.53□□□□□ -2
snR35snR35 TDH3P00359 332 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
snR35snR35 EPT1P22140 391 aa2.52□□□□□ -2.01
snR35snR35 PCL1P24867 279 aa2.52□□□□□ -2.01
snR35snR35 INO2P26798 304 aa2.52□□□□□ -2.01
snR35snR35 PRS1P32895 427 aaKnown RBP2.52□□□□□ -2.01
snR35snR35 YUH1P35127 236 aa2.52□□□□□ -2.01
snR35snR35 SDS24P38314 527 aa2.52□□□□□ -2.01
snR35snR35 SLM1P40485 686 aa2.52□□□□□ -2.01
snR35snR35 SHQ1P40486 507 aaPredicted RBP2.52□□□□□ -2.01
snR35snR35 YIA6P40556 373 aa2.52□□□□□ -2.01
snR35snR35 PGU1P47180 361 aa2.52□□□□□ -2.01
snR35snR35 TIS11P47977 285 aa2.52□□□□□ -2.01
snR35snR35 KAP114P53067 1004 aa2.52□□□□□ -2.01
snR35snR35 SPP2Q02521 185 aa2.52□□□□□ -2.01
snR35snR35 RPL21AQ02753 160 aaKnown RBP2.52□□□□□ -2.01
snR35snR35 ATC1Q04005 294 aa2.52□□□□□ -2.01
snR35snR35 ASR1Q06834 288 aa2.52□□□□□ -2.01
snR35snR35 VIK1Q12045 647 aa2.52□□□□□ -2.01
snR35snR35 YDR018CQ12185 396 aa2.52□□□□□ -2.01
snR35snR35 YPR064WQ12492 139 aa2.52□□□□□ -2.01
snR35snR35 LAG2Q92325 660 aa2.52□□□□□ -2.01
snR35snR35 BI3Q9ZZW7 517 aa2.52□□□□□ -2.01
snR35snR35 ILV1P00927 576 aaKnown RBP2.51□□□□□ -2.01
snR35snR35 TPI1P00942 248 aaKnown RBP2.51□□□□□ -2.01
snR35snR35 MRPL20P22354 195 aaPredicted RBP2.51□□□□□ -2.01
snR35snR35 YSR3P23501 404 aa2.51□□□□□ -2.01
snR35snR35 IMP3P32899 183 aaPredicted RBP2.51□□□□□ -2.01
snR35snR35 SKG6P32900 734 aaPredicted RBP2.51□□□□□ -2.01
snR35snR35 TAE1P38340 232 aa2.51□□□□□ -2.01
snR35snR35 PET8P38921 284 aa2.51□□□□□ -2.01
snR35snR35 SMC2P38989 1170 aaKnown RBP2.51□□□□□ -2.01
snR35snR35 HIT1P46973 164 aa2.51□□□□□ -2.01
snR35snR35 YPT32P51996 222 aaKnown RBP2.51□□□□□ -2.01
snR35snR35 YGL262WP53054 175 aa2.51□□□□□ -2.01
snR35snR35 YNR066CP53752 436 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms