RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W GDH1P07262 454 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W YMR085WP0CF18 432 aa1.48□□□□□ -2.17
CTF4YPR135W RPL18AP0CX49 186 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W RPL18BP0CX50 186 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W RPL12AP0CX53 165 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W RPL12BP0CX54 165 aa1.48□□□□□ -2.17
CTF4YPR135W RNA1P11745 407 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W AMD1P15274 810 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W MET16P18408 261 aaPredicted RBP1.48□□□□□ -2.17
CTF4YPR135W AAT2P23542 418 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W RVS161P25343 265 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W GID7P25569 745 aa1.48□□□□□ -2.17
CTF4YPR135W DEG1P31115 442 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W ACH1P32316 526 aa1.48□□□□□ -2.17
CTF4YPR135W CBP4P37267 147 aa1.48□□□□□ -2.17
CTF4YPR135W INM1P38710 295 aa1.48□□□□□ -2.17
CTF4YPR135W PRP39P39682 629 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W YAR1P46683 200 aa1.48□□□□□ -2.17
CTF4YPR135W YHC3P47040 408 aa1.48□□□□□ -2.17
CTF4YPR135W YJR011CP47086 261 aaPredicted RBP1.48□□□□□ -2.17
CTF4YPR135W EMC2P47133 292 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W YJR154WP47181 346 aa1.48□□□□□ -2.17
CTF4YPR135W YNL234WP53857 426 aa1.48□□□□□ -2.17
CTF4YPR135W EAF7P53911 425 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W URH1Q04179 340 aa1.48□□□□□ -2.17
CTF4YPR135W APC4Q04601 652 aa1.48□□□□□ -2.17
CTF4YPR135W YMR034CQ05131 434 aaPredicted RBP1.48□□□□□ -2.17
CTF4YPR135W ECI1Q05871 280 aa1.48□□□□□ -2.17
CTF4YPR135W SNA4Q07549 140 aa1.48□□□□□ -2.17
CTF4YPR135W CMS1Q07897 291 aaKnown RBP1.48□□□□□ -2.17
CTF4YPR135W NRT1Q08485 598 aa1.48□□□□□ -2.17
CTF4YPR135W LAG2Q92325 660 aa1.48□□□□□ -2.17
CTF4YPR135W CDC21P06785 304 aa1.47□□□□□ -2.17
CTF4YPR135W BAR1P12630 587 aa1.47□□□□□ -2.17
CTF4YPR135W PEP5P12868 1029 aa1.47□□□□□ -2.17
CTF4YPR135W TYR1P20049 452 aa1.47□□□□□ -2.17
CTF4YPR135W GPI12P23797 304 aa1.47□□□□□ -2.17
CTF4YPR135W COQ3P27680 312 aa1.47□□□□□ -2.17
CTF4YPR135W SAC1P32368 623 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W TOA2P32774 122 aa1.47□□□□□ -2.17
CTF4YPR135W REC114P32841 428 aa1.47□□□□□ -2.17
CTF4YPR135W CBF5P33322 483 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
CTF4YPR135W YKL102CP34249 101 aa1.47□□□□□ -2.17
CTF4YPR135W CYC2P38909 366 aa1.47□□□□□ -2.17
CTF4YPR135W PET100P38958 111 aa1.47□□□□□ -2.17
CTF4YPR135W LCP5P40079 357 aaPredicted RBP1.47□□□□□ -2.17
CTF4YPR135W YIL024CP40543 189 aa1.47□□□□□ -2.17
CTF4YPR135W PAC11P40960 533 aa1.47□□□□□ -2.17
CTF4YPR135W BNA6P43619 295 aa1.47□□□□□ -2.17
CTF4YPR135W TRS85P46944 698 aa1.47□□□□□ -2.17
CTF4YPR135W GIP3Q03016 1276 aa1.47□□□□□ -2.17
CTF4YPR135W ENT5Q03769 411 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W HSP31Q04432 237 aa1.47□□□□□ -2.17
CTF4YPR135W ARP10Q04549 284 aa1.47□□□□□ -2.17
CTF4YPR135W ADH6Q04894 360 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W GRX8Q05926 109 aa1.47□□□□□ -2.17
CTF4YPR135W SSQ1Q05931 657 aaPredicted RBP1.47□□□□□ -2.17
CTF4YPR135W MRPL35Q06678 367 aa1.47□□□□□ -2.17
CTF4YPR135W PRP46Q12417 451 aaPredicted RBP1.47□□□□□ -2.17
CTF4YPR135W YLR111WQ12528 110 aa1.47□□□□□ -2.17
CTF4YPR135W ADH2P00331 348 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W MATALPHA1P0CY06 175 aa1.47□□□□□ -2.17
CTF4YPR135W HMLALPHA1P0CY07 175 aa1.47□□□□□ -2.17
CTF4YPR135W EPT1P22140 391 aa1.47□□□□□ -2.17
CTF4YPR135W CTR86P25355 563 aa1.47□□□□□ -2.17
CTF4YPR135W RPS5P26783 225 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W PMT2P31382 759 aa1.47□□□□□ -2.17
CTF4YPR135W YNK1P36010 153 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W COS9P36034 407 aa1.47□□□□□ -2.17
CTF4YPR135W CAB3P36076 571 aa1.47□□□□□ -2.17
CTF4YPR135W YPK3P38070 525 aa1.47□□□□□ -2.17
CTF4YPR135W OLA1P38219 394 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W YGP1P38616 354 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W ARN1P38731 627 aa1.47□□□□□ -2.17
CTF4YPR135W YHR182WP38870 785 aa1.47□□□□□ -2.17
CTF4YPR135W PRM9P39551 298 aa1.47□□□□□ -2.17
CTF4YPR135W YEL073CP39974 107 aa1.47□□□□□ -2.17
CTF4YPR135W PEX31P53203 462 aa1.47□□□□□ -2.17
CTF4YPR135W DUG3P53871 357 aa1.47□□□□□ -2.17
CTF4YPR135W YMR310CQ04867 317 aaPredicted RBP1.47□□□□□ -2.17
CTF4YPR135W MSA1Q08471 629 aa1.47□□□□□ -2.17
CTF4YPR135W PEX27Q08580 376 aa1.47□□□□□ -2.17
CTF4YPR135W LSP1Q12230 341 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W YOR029WQ12243 111 aa1.47□□□□□ -2.17
CTF4YPR135W RRI1Q12468 440 aa1.47□□□□□ -2.17
CTF4YPR135W BRR1Q99177 341 aaPredicted RBP1.47□□□□□ -2.17
CTF4YPR135W COX5AP00424 153 aa1.47□□□□□ -2.17
CTF4YPR135W TEF1P02994 458 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W ARG4P04076 463 aaPredicted RBP1.47□□□□□ -2.17
CTF4YPR135W RPL15AP05748 204 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W RPS8AP0CX39 200 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W RPS8BP0CX40 200 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W CKI1P20485 582 aa1.47□□□□□ -2.17
CTF4YPR135W YCP4P25349 247 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W FUN19P28003 413 aaPredicted RBP1.47□□□□□ -2.17
CTF4YPR135W ITR1P30605 584 aa1.47□□□□□ -2.17
CTF4YPR135W MSK1P32048 576 aa1.47□□□□□ -2.17
CTF4YPR135W SRB4P32569 687 aa1.47□□□□□ -2.17
CTF4YPR135W CYS4P32582 507 aaKnown RBP1.47□□□□□ -2.17
CTF4YPR135W RRP1P35178 278 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms