RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W YMR099CQ03161 297 aaKnown RBP5.9□□□□□ -1.46
LSC1YOR142W ABZ2Q03266 374 aa5.9□□□□□ -1.46
LSC1YOR142W API2Q04413 109 aa5.9□□□□□ -1.46
LSC1YOR142W SNO4Q04902 237 aa5.9□□□□□ -1.46
LSC1YOR142W HSP33Q08914 237 aaKnown RBP5.9□□□□□ -1.46
LSC1YOR142W HSP32Q08992 237 aa5.9□□□□□ -1.46
LSC1YOR142W HMS1Q12398 434 aa5.9□□□□□ -1.46
LSC1YOR142W APC2Q12440 853 aa5.9□□□□□ -1.46
LSC1YOR142W HEM4P06174 275 aa5.89□□□□□ -1.47
LSC1YOR142W ATR1P13090 542 aa5.89□□□□□ -1.47
LSC1YOR142W DPM1P14020 267 aaKnown RBP5.89□□□□□ -1.47
LSC1YOR142W TFS1P14306 219 aa5.89□□□□□ -1.47
LSC1YOR142W PRP28P23394 588 aa5.89□□□□□ -1.47
LSC1YOR142W MDH3P32419 343 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
LSC1YOR142W MSN4P33749 630 aa5.89□□□□□ -1.47
LSC1YOR142W SOF1P33750 489 aaKnown RBP5.89□□□□□ -1.47
LSC1YOR142W PAD1P33751 242 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
LSC1YOR142W NIC96P34077 839 aa5.89□□□□□ -1.47
LSC1YOR142W MAE1P36013 669 aaKnown RBP5.89□□□□□ -1.47
LSC1YOR142W MRPL39P36533 70 aa5.89□□□□□ -1.47
LSC1YOR142W SEN34P39707 275 aa5.89□□□□□ -1.47
LSC1YOR142W GDI1P39958 451 aaKnown RBP5.89□□□□□ -1.47
LSC1YOR142W THO1P40040 218 aaKnown RBP5.89□□□□□ -1.47
LSC1YOR142W YRB2P40517 327 aa5.89□□□□□ -1.47
LSC1YOR142W ADO1P47143 340 aaKnown RBP5.89□□□□□ -1.47
LSC1YOR142W KAP120Q02932 1032 aa5.89□□□□□ -1.47
LSC1YOR142W RSM24Q03976 319 aa5.89□□□□□ -1.47
LSC1YOR142W SMP3Q04174 516 aa5.89□□□□□ -1.47
LSC1YOR142W ELP6Q04868 273 aa5.89□□□□□ -1.47
LSC1YOR142W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
LSC1YOR142W YDL007C-AQ2V2Q0 85 aa5.89□□□□□ -1.47
LSC1YOR142W RIB3Q99258 208 aa5.89□□□□□ -1.47
LSC1YOR142W SPS100P13130 326 aa5.88□□□□□ -1.47
LSC1YOR142W GAS1P22146 559 aaKnown RBP5.88□□□□□ -1.47
LSC1YOR142W BUD5P25300 642 aaPredicted RBP5.88□□□□□ -1.47
LSC1YOR142W PPA2P28239 310 aa5.88□□□□□ -1.47
LSC1YOR142W THI4P32318 326 aa5.88□□□□□ -1.47
LSC1YOR142W MCM10P32354 571 aa5.88□□□□□ -1.47
LSC1YOR142W CYS4P32582 507 aaKnown RBP5.88□□□□□ -1.47
LSC1YOR142W CHK1P38147 527 aa5.88□□□□□ -1.47
LSC1YOR142W ECM8P38246 354 aa5.88□□□□□ -1.47
LSC1YOR142W SBE22P38814 852 aa5.88□□□□□ -1.47
LSC1YOR142W RRG9P40156 214 aa5.88□□□□□ -1.47
LSC1YOR142W YFL051CP43552 160 aa5.88□□□□□ -1.47
LSC1YOR142W ILM1P47155 203 aa5.88□□□□□ -1.47
LSC1YOR142W EXG2P52911 562 aa5.88□□□□□ -1.47
LSC1YOR142W MKC7P53379 596 aa5.88□□□□□ -1.47
LSC1YOR142W MRP51Q02950 344 aa5.88□□□□□ -1.47
LSC1YOR142W RAF1Q06891 181 aa5.88□□□□□ -1.47
LSC1YOR142W UIP4Q08926 304 aa5.88□□□□□ -1.47
LSC1YOR142W NIP7Q08962 181 aaKnown RBP5.88□□□□□ -1.47
LSC1YOR142W YDL180WQ12301 547 aa5.88□□□□□ -1.47
LSC1YOR142W YPL119C-AQ3E751 87 aa5.88□□□□□ -1.47
LSC1YOR142W YHR214C-EQ8TGK0 99 aa5.88□□□□□ -1.47
LSC1YOR142W ISC1P40015 477 aaKnown RBP5.87□□□□□ -1.47
LSC1YOR142W YJR098CP47139 656 aa5.87□□□□□ -1.47
LSC1YOR142W YGL101WP53144 215 aa5.87□□□□□ -1.47
LSC1YOR142W PCP1P53259 346 aa5.87□□□□□ -1.47
LSC1YOR142W RRN9P53437 365 aa5.87□□□□□ -1.47
LSC1YOR142W YDR102CQ03864 110 aa5.87□□□□□ -1.47
LSC1YOR142W EMG1Q06287 252 aaKnown RBP5.87□□□□□ -1.47
LSC1YOR142W TPK3P05986 398 aa5.86□□□□□ -1.47
LSC1YOR142W SEC12P11655 471 aa5.86□□□□□ -1.47
LSC1YOR142W SAM35P14693 329 aa5.86□□□□□ -1.47
LSC1YOR142W RPC82P32349 654 aa5.86□□□□□ -1.47
LSC1YOR142W MTR2P34232 184 aaKnown RBP5.86□□□□□ -1.47
LSC1YOR142W YBR063CP38083 404 aa5.86□□□□□ -1.47
LSC1YOR142W RPS20P38701 121 aaKnown RBP5.86□□□□□ -1.47
LSC1YOR142W YHL037CP38733 133 aa5.86□□□□□ -1.47
LSC1YOR142W MPH1P40562 993 aa5.86□□□□□ -1.47
LSC1YOR142W GPP1P41277 250 aaKnown RBP5.86□□□□□ -1.47
LSC1YOR142W IDP2P41939 412 aa5.86□□□□□ -1.47
LSC1YOR142W MON1P53129 644 aa5.86□□□□□ -1.47
LSC1YOR142W OST6Q03723 332 aa5.86□□□□□ -1.47
LSC1YOR142W CTS2Q06350 511 aa5.86□□□□□ -1.47
LSC1YOR142W MED2Q12124 431 aa5.86□□□□□ -1.47
LSC1YOR142W TAF3Q12297 353 aa5.86□□□□□ -1.47
LSC1YOR142W DBP10Q12389 995 aaKnown RBP5.86□□□□□ -1.47
LSC1YOR142W CDC36P06100 191 aaPredicted RBP5.85□□□□□ -1.47
LSC1YOR142W MET2P08465 486 aa5.85□□□□□ -1.47
LSC1YOR142W GIT1P25346 518 aa5.85□□□□□ -1.47
LSC1YOR142W YCL002CP25565 263 aa5.85□□□□□ -1.47
LSC1YOR142W CAM1P29547 415 aaKnown RBP5.85□□□□□ -1.47
LSC1YOR142W PUP2P32379 260 aa5.85□□□□□ -1.47
LSC1YOR142W YGP1P38616 354 aaKnown RBP5.85□□□□□ -1.47
LSC1YOR142W CHL4P38907 458 aa5.85□□□□□ -1.47
LSC1YOR142W SWP82P43554 623 aa5.85□□□□□ -1.47
LSC1YOR142W IDS2P46958 469 aa5.85□□□□□ -1.47
LSC1YOR142W MDE1P47095 244 aa5.85□□□□□ -1.47
LSC1YOR142W MRPL19P53875 158 aa5.85□□□□□ -1.47
LSC1YOR142W HOT1Q03213 719 aa5.85□□□□□ -1.47
LSC1YOR142W RRP9Q06506 573 aaKnown RBP5.85□□□□□ -1.47
LSC1YOR142W TAZ1Q06510 381 aa5.85□□□□□ -1.47
LSC1YOR142W MRL1Q06815 381 aa5.85□□□□□ -1.47
LSC1YOR142W YPR097WQ06839 1073 aa5.85□□□□□ -1.47
LSC1YOR142W SIA1Q12212 622 aa5.85□□□□□ -1.47
LSC1YOR142W OPI3P05375 206 aa5.84□□□□□ -1.47
LSC1YOR142W CPR2P23285 205 aa5.84□□□□□ -1.47
LSC1YOR142W EXG1P23776 448 aaKnown RBP5.84□□□□□ -1.47
LSC1YOR142W VPH2P32341 215 aa5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms