RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W ASP3-2P0CX77 362 aa3.12□□□□□ -1.91
VPS17YOR132W ASP3-3P0CX78 362 aa3.12□□□□□ -1.91
VPS17YOR132W ASP3-4P0CX79 362 aa3.12□□□□□ -1.91
VPS17YOR132W ASP3-1P0CZ17 362 aa3.12□□□□□ -1.91
VPS17YOR132W POL30P15873 258 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W EXO70P19658 623 aa3.12□□□□□ -1.91
VPS17YOR132W MCK1P21965 375 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W RVS161P25343 265 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W YCR016WP25617 290 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W RPC19P28000 142 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W CWP1P28319 239 aa3.12□□□□□ -1.91
VPS17YOR132W ATS1P31386 333 aa3.12□□□□□ -1.91
VPS17YOR132W MSN2P33748 704 aa3.12□□□□□ -1.91
VPS17YOR132W BNA4P38169 460 aa3.12□□□□□ -1.91
VPS17YOR132W RTC2P38279 296 aa3.12□□□□□ -1.91
VPS17YOR132W SBE22P38814 852 aa3.12□□□□□ -1.91
VPS17YOR132W FET3P38993 636 aa3.12□□□□□ -1.91
VPS17YOR132W HMF1P40037 129 aaKnown RBP3.12□□□□□ -1.91
VPS17YOR132W SYG1P40528 902 aa3.12□□□□□ -1.91
VPS17YOR132W YPS6P40583 537 aa3.12□□□□□ -1.91
VPS17YOR132W YFL012WP43580 148 aa3.12□□□□□ -1.91
VPS17YOR132W LOH1P47055 219 aa3.12□□□□□ -1.91
VPS17YOR132W PMT5P52867 743 aa3.12□□□□□ -1.91
VPS17YOR132W SLT2Q00772 484 aa3.12□□□□□ -1.91
VPS17YOR132W PNG1Q02890 363 aa3.12□□□□□ -1.91
VPS17YOR132W SNT309Q06091 175 aaPredicted RBP3.12□□□□□ -1.91
VPS17YOR132W VPS74Q06385 345 aa3.12□□□□□ -1.91
VPS17YOR132W IMA2Q08295 589 aa3.12□□□□□ -1.91
VPS17YOR132W AYT1Q12226 474 aa3.12□□□□□ -1.91
VPS17YOR132W RNH203Q12338 110 aa3.12□□□□□ -1.91
VPS17YOR132W ATG31Q12421 196 aa3.12□□□□□ -1.91
VPS17YOR132W SNA3P14359 133 aa3.11□□□□□ -1.91
VPS17YOR132W DBR1P24309 405 aaKnown RBP3.11□□□□□ -1.91
VPS17YOR132W RPL5P26321 297 aaKnown RBP3.11□□□□□ -1.91
VPS17YOR132W CIN8P27895 1000 aa3.11□□□□□ -1.91
VPS17YOR132W PRR1P28708 518 aa3.11□□□□□ -1.91
VPS17YOR132W DEG1P31115 442 aaKnown RBP3.11□□□□□ -1.91
VPS17YOR132W AST1P35183 429 aa3.11□□□□□ -1.91
VPS17YOR132W TRM5P38793 499 aa3.11□□□□□ -1.91
VPS17YOR132W AVT2P39981 480 aa3.11□□□□□ -1.91
VPS17YOR132W YRB2P40517 327 aa3.11□□□□□ -1.91
VPS17YOR132W YIL054WP40524 105 aa3.11□□□□□ -1.91
VPS17YOR132W SNL1P40548 159 aa3.11□□□□□ -1.91
VPS17YOR132W YJR011CP47086 261 aaPredicted RBP3.11□□□□□ -1.91
VPS17YOR132W STE24P47154 453 aa3.11□□□□□ -1.91
VPS17YOR132W MIG2P53035 382 aa3.11□□□□□ -1.91
VPS17YOR132W IRC15Q02733 499 aa3.11□□□□□ -1.91
VPS17YOR132W CDD1Q06549 142 aa3.11□□□□□ -1.91
VPS17YOR132W DNL4Q08387 944 aaPredicted RBP3.11□□□□□ -1.91
VPS17YOR132W BTS1Q12051 335 aa3.11□□□□□ -1.91
VPS17YOR132W YPR022CQ12139 1133 aa3.11□□□□□ -1.91
VPS17YOR132W RUP1Q12242 671 aa3.11□□□□□ -1.91
VPS17YOR132W BRR1Q99177 341 aaPredicted RBP3.11□□□□□ -1.91
VPS17YOR132W LAA1P39526 2014 aa3.11□□□□□ -1.91
VPS17YOR132W OPI3P05375 206 aa3.11□□□□□ -1.91
VPS17YOR132W YLL053CP0CD98 152 aa3.11□□□□□ -1.91
VPS17YOR132W YAK1P14680 807 aa3.11□□□□□ -1.91
VPS17YOR132W GPI12P23797 304 aa3.11□□□□□ -1.91
VPS17YOR132W MSK1P32048 576 aa3.11□□□□□ -1.91
VPS17YOR132W MEI5P32489 222 aa3.11□□□□□ -1.91
VPS17YOR132W CYS4P32582 507 aaKnown RBP3.11□□□□□ -1.91
VPS17YOR132W CYM1P32898 989 aa3.11□□□□□ -1.91
VPS17YOR132W VAB2P40003 282 aa3.11□□□□□ -1.91
VPS17YOR132W SHO1P40073 367 aa3.11□□□□□ -1.91
VPS17YOR132W PEP8P40335 379 aa3.11□□□□□ -1.91
VPS17YOR132W MAM33P40513 266 aa3.11□□□□□ -1.91
VPS17YOR132W GVP36P40531 326 aaKnown RBP3.11□□□□□ -1.91
VPS17YOR132W GPI1P53306 609 aa3.11□□□□□ -1.91
VPS17YOR132W COS6P53344 381 aa3.11□□□□□ -1.91
VPS17YOR132W YMR209CQ03648 457 aa3.11□□□□□ -1.91
VPS17YOR132W YET2Q04210 160 aa3.11□□□□□ -1.91
VPS17YOR132W YPR202WQ08993 238 aa3.11□□□□□ -1.91
VPS17YOR132W APC9Q12107 265 aa3.11□□□□□ -1.91
VPS17YOR132W TDH3P00359 332 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
VPS17YOR132W RPS16AP0CX51 143 aaKnown RBP3.1□□□□□ -1.91
VPS17YOR132W RPS16BP0CX52 143 aaKnown RBP3.1□□□□□ -1.91
VPS17YOR132W ATR1P13090 542 aa3.1□□□□□ -1.91
VPS17YOR132W KSS1P14681 368 aa3.1□□□□□ -1.91
VPS17YOR132W APA2P22108 325 aa3.1□□□□□ -1.91
VPS17YOR132W AGA1P32323 725 aa3.1□□□□□ -1.91
VPS17YOR132W PMU1P36069 295 aa3.1□□□□□ -1.91
VPS17YOR132W PHO89P38361 574 aa3.1□□□□□ -1.91
VPS17YOR132W YHR182WP38870 785 aa3.1□□□□□ -1.91
VPS17YOR132W PRM9P39551 298 aa3.1□□□□□ -1.91
VPS17YOR132W POP1P41812 875 aa3.1□□□□□ -1.91
VPS17YOR132W YFL040WP43562 540 aa3.1□□□□□ -1.91
VPS17YOR132W MRM2P53123 320 aa3.1□□□□□ -1.91
VPS17YOR132W EFM5P53200 248 aaKnown RBP3.1□□□□□ -1.91
VPS17YOR132W MRP51Q02950 344 aa3.1□□□□□ -1.91
VPS17YOR132W YDR476CQ03362 224 aa3.1□□□□□ -1.91
VPS17YOR132W ARO80Q04052 950 aa3.1□□□□□ -1.91
VPS17YOR132W HSP31Q04432 237 aa3.1□□□□□ -1.91
VPS17YOR132W FAR10Q06001 478 aa3.1□□□□□ -1.91
VPS17YOR132W AAD15Q08361 143 aa3.1□□□□□ -1.91
VPS17YOR132W SNX3Q08826 162 aaKnown RBP3.1□□□□□ -1.91
VPS17YOR132W YLL056CQ12177 298 aa3.1□□□□□ -1.91
VPS17YOR132W GLE1Q12315 538 aa3.1□□□□□ -1.91
VPS17YOR132W PRP46Q12417 451 aaPredicted RBP3.1□□□□□ -1.91
VPS17YOR132W APC2Q12440 853 aa3.1□□□□□ -1.91
VPS17YOR132W FSH3Q99369 266 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms