RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	YOR032W-A	Q8TGS1	66 aa		2.69	□□□□□ -1.98
ATG3	YNR007C	POL2	P21951	2222 aa	Known RBP	2.68	□□□□□ -1.98
ATG3	YNR007C	STE7	P06784	515 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
ATG3	YNR007C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
ATG3	YNR007C	PUT3	P25502	979 aa	Predicted RBP	2.68	□□□□□ -1.98
ATG3	YNR007C	YCR102C	P25608	368 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	PMT2	P31382	759 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	HIR2	P32480	875 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	ECM25	P32525	599 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	MGM101	P32787	269 aa	Known RBP	2.68	□□□□□ -1.98
ATG3	YNR007C	FRE2	P36033	711 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	PMU1	P36069	295 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	RRN10	P38204	145 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	RFC3	P38629	340 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	INM1	P38710	295 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	NPT1	P39683	429 aa	Known RBP	2.68	□□□□□ -1.98
ATG3	YNR007C	YIL086C	P40503	102 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	APQ12	P40532	138 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	ODC1	Q03028	310 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	URH1	Q04179	340 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	YMR130W	Q04223	302 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	YLR345W	Q06137	509 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	SGT1	Q08446	395 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	ESA1	Q08649	445 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	TMS1	Q12116	473 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	ATG34	Q12292	412 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	RGS2	Q99188	309 aa		2.68	□□□□□ -1.98
ATG3	YNR007C	STE2	D6VTK4	431 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	SCEI	P03882	235 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	YCR100C	P25606	316 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	YCR090C	P25654	182 aa	Known RBP	2.67	□□□□□ -1.98
ATG3	YNR007C	PUP2	P32379	260 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	PHA2	P32452	334 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	APE2	P32454	952 aa	Known RBP	2.67	□□□□□ -1.98
ATG3	YNR007C	MEI5	P32489	222 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	YCR087C-A	P37263	153 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	SLM4	P38247	162 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	BMT2	P38278	337 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	MTC4	P38335	694 aa	Known RBP	2.67	□□□□□ -1.98
ATG3	YNR007C	YHI9	P38765	294 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	MNL1	P38888	796 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	GGC1	P38988	300 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	ISC1	P40015	477 aa	Known RBP	2.67	□□□□□ -1.98
ATG3	YNR007C	YIL001W	P40560	513 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	MIC19	P43594	170 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	RPS0B	P46654	252 aa	Known RBP	2.67	□□□□□ -1.98
ATG3	YNR007C	APS3	P47064	194 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	TOM22	P49334	152 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	CAF40	P53829	373 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	YNL140C	P53910	189 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	MRP51	Q02950	344 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	TAF12	Q03761	539 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	ACL4	Q03771	387 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	MDM30	Q05930	598 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	BOP2	Q06150	570 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	SEC10	Q06245	871 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	NOP6	Q07623	225 aa	Known RBP	2.67	□□□□□ -1.98
ATG3	YNR007C	AKR2	Q12013	749 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	AYT1	Q12226	474 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	YPR011C	Q12251	326 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	MDY2	Q12285	212 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	GLE1	Q12315	538 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	PAR32	Q12515	295 aa	Known RBP	2.67	□□□□□ -1.98
ATG3	YNR007C	YOS9	Q99220	542 aa		2.67	□□□□□ -1.98
ATG3	YNR007C	RPI1	P23250	407 aa	Known RBP	2.66	□□□□□ -1.98
ATG3	YNR007C	RHB1	P25378	209 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
ATG3	YNR007C	RPS1A	P33442	255 aa	Known RBP	2.66	□□□□□ -1.98
ATG3	YNR007C	LTV1	P34078	463 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	LAS1	P36146	502 aa	Predicted RBP	2.66	□□□□□ -1.98
ATG3	YNR007C	YHB1	P39676	399 aa	Known RBP	2.66	□□□□□ -1.98
ATG3	YNR007C	SER3	P40054	469 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	SAS2	P40963	338 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	YRB1	P41920	201 aa	Known RBP	2.66	□□□□□ -1.98
ATG3	YNR007C	RAD17	P48581	401 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	YIP1	P53039	248 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	IBD2	P53892	351 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	LSM3	P57743	89 aa	Known RBP	2.66	□□□□□ -1.98
ATG3	YNR007C	MRS2	Q01926	470 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	YDR387C	Q04162	555 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	DCS1	Q06151	350 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	YPR172W	Q06608	200 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	YOL019W	Q08157	551 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	REX4	Q08237	289 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	MUM3	Q08750	479 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	YOR342C	Q12182	319 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	RUP1	Q12242	671 aa		2.66	□□□□□ -1.98
ATG3	YNR007C	CDC21	P06785	304 aa		2.65	□□□□□ -1.99
ATG3	YNR007C	RPL43A	P0CX25	92 aa	Known RBP	2.65	□□□□□ -1.99
ATG3	YNR007C	RPL43B	P0CX26	92 aa		2.65	□□□□□ -1.99
ATG3	YNR007C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
ATG3	YNR007C	HEM15	P16622	393 aa		2.65	□□□□□ -1.99
ATG3	YNR007C	SPO7	P18410	259 aa		2.65	□□□□□ -1.99
ATG3	YNR007C	RPO26	P20435	155 aa		2.65	□□□□□ -1.99
ATG3	YNR007C	YCR022C	P25620	114 aa		2.65	□□□□□ -1.99
ATG3	YNR007C	TAH1	P25638	111 aa	Predicted RBP	2.65	□□□□□ -1.99
ATG3	YNR007C	ERV1	P27882	189 aa		2.65	□□□□□ -1.99
ATG3	YNR007C	GLC7	P32598	312 aa	Known RBP	2.65	□□□□□ -1.99
ATG3	YNR007C	SSO1	P32867	290 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms