RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C SWD2P36104 329 aaPredicted RBP2.81□□□□□ -1.96
WHI3YNL197C YAR1P46683 200 aa2.81□□□□□ -1.96
WHI3YNL197C VHT1P53241 593 aa2.81□□□□□ -1.96
WHI3YNL197C RMI1Q02685 241 aa2.81□□□□□ -1.96
WHI3YNL197C TSA2Q04120 196 aa2.81□□□□□ -1.96
WHI3YNL197C LIP2Q06005 328 aa2.81□□□□□ -1.96
WHI3YNL197C MHR1Q06630 226 aa2.81□□□□□ -1.96
WHI3YNL197C BER1Q06688 274 aaKnown RBP2.81□□□□□ -1.96
WHI3YNL197C CTA1P15202 515 aa2.81□□□□□ -1.96
WHI3YNL197C POL30P15873 258 aaKnown RBP2.81□□□□□ -1.96
WHI3YNL197C YEL045CP32616 141 aa2.81□□□□□ -1.96
WHI3YNL197C KTI12P34253 313 aaKnown RBP2.81□□□□□ -1.96
WHI3YNL197C RPC37P36121 282 aa2.81□□□□□ -1.96
WHI3YNL197C YPL077CQ02831 240 aa2.81□□□□□ -1.96
WHI3YNL197C URA10P30402 227 aa2.8□□□□□ -1.96
WHI3YNL197C IMP3P32899 183 aaPredicted RBP2.8□□□□□ -1.96
WHI3YNL197C PRE5P40302 234 aaKnown RBP2.8□□□□□ -1.96
WHI3YNL197C SDT1P53078 280 aa2.8□□□□□ -1.96
WHI3YNL197C TIM11P81449 96 aaPredicted RBP2.8□□□□□ -1.96
WHI3YNL197C TPS1Q00764 495 aaKnown RBP2.8□□□□□ -1.96
WHI3YNL197C COX20Q04935 205 aa2.8□□□□□ -1.96
WHI3YNL197C TMC1Q08422 150 aaPredicted RBP2.8□□□□□ -1.96
WHI3YNL197C UTP23Q12339 254 aaKnown RBP2.8□□□□□ -1.96
WHI3YNL197C MSF1P08425 469 aa2.8□□□□□ -1.96
WHI3YNL197C RPL16BP26785 198 aaKnown RBP2.8□□□□□ -1.96
WHI3YNL197C YKL063CP35725 167 aa2.8□□□□□ -1.96
WHI3YNL197C YBR241CP38142 488 aa2.8□□□□□ -1.96
WHI3YNL197C SMC2P38989 1170 aaKnown RBP2.8□□□□□ -1.96
WHI3YNL197C IGD1P43598 195 aa2.8□□□□□ -1.96
WHI3YNL197C YNL040WP53960 456 aaPredicted RBP2.8□□□□□ -1.96
WHI3YNL197C YLR152CP54072 576 aa2.8□□□□□ -1.96
WHI3YNL197C CDC14Q00684 551 aa2.8□□□□□ -1.96
WHI3YNL197C TAZ1Q06510 381 aa2.8□□□□□ -1.96
WHI3YNL197C ASR1Q06834 288 aa2.8□□□□□ -1.96
WHI3YNL197C COX4P04037 155 aa2.79□□□□□ -1.96
WHI3YNL197C COT1P32798 439 aa2.79□□□□□ -1.96
WHI3YNL197C SOL2P37262 315 aa2.79□□□□□ -1.96
WHI3YNL197C YBR062CP38239 180 aa2.79□□□□□ -1.96
WHI3YNL197C SHE3P38272 425 aaKnown RBP2.79□□□□□ -1.96
WHI3YNL197C BMT2P38278 337 aa2.79□□□□□ -1.96
WHI3YNL197C PRM9P39551 298 aa2.79□□□□□ -1.96
WHI3YNL197C KEL2P50090 882 aa2.79□□□□□ -1.96
WHI3YNL197C VBA1Q04301 562 aa2.79□□□□□ -1.96
WHI3YNL197C SCW10Q04951 389 aa2.79□□□□□ -1.96
WHI3YNL197C YLR446WQ06204 433 aa2.79□□□□□ -1.96
WHI3YNL197C RPL21BQ12672 160 aaKnown RBP2.79□□□□□ -1.96
WHI3YNL197C IZH4Q99393 312 aa2.79□□□□□ -1.96
WHI3YNL197C MHP1P43638 1398 aa2.78□□□□□ -1.96
WHI3YNL197C RPL24AP04449 155 aaKnown RBP2.78□□□□□ -1.96
WHI3YNL197C RSR1P13856 272 aa2.78□□□□□ -1.96
WHI3YNL197C ICL1P28240 557 aaPredicted RBP2.78□□□□□ -1.96
WHI3YNL197C CYM1P32898 989 aa2.78□□□□□ -1.96
WHI3YNL197C COY1P34237 679 aa2.78□□□□□ -1.96
WHI3YNL197C GPX1P36014 167 aa2.78□□□□□ -1.96
WHI3YNL197C YKL071WP36086 256 aa2.78□□□□□ -1.96
WHI3YNL197C MRPL27P36526 146 aaPredicted RBP2.78□□□□□ -1.96
WHI3YNL197C WSC4P38739 605 aa2.78□□□□□ -1.96
WHI3YNL197C STB1P42845 420 aa2.78□□□□□ -1.96
WHI3YNL197C YJL118WP47022 219 aa2.78□□□□□ -1.96
WHI3YNL197C KAP114P53067 1004 aa2.78□□□□□ -1.96
WHI3YNL197C SDS23P53172 527 aa2.78□□□□□ -1.96
WHI3YNL197C YGL039WP53183 348 aaKnown RBP2.78□□□□□ -1.96
WHI3YNL197C ADD37Q03233 198 aa2.78□□□□□ -1.96
WHI3YNL197C YDR115WQ04598 105 aa2.78□□□□□ -1.96
WHI3YNL197C TY3A-GQ12173 290 aa2.78□□□□□ -1.96
WHI3YNL197C YDR018CQ12185 396 aa2.78□□□□□ -1.96
WHI3YNL197C TY3A-IQ99219 290 aa2.78□□□□□ -1.96
WHI3YNL197C SSK22P25390 1331 aaPredicted RBP2.78□□□□□ -1.96
WHI3YNL197C ERD1P16151 362 aa2.78□□□□□ -1.97
WHI3YNL197C NUP84P52891 726 aa2.78□□□□□ -1.97
WHI3YNL197C SWC4P53201 476 aa2.78□□□□□ -1.97
WHI3YNL197C YNR066CP53752 436 aa2.78□□□□□ -1.97
WHI3YNL197C RNH201P53942 307 aa2.78□□□□□ -1.97
WHI3YNL197C MRX11Q03079 207 aa2.78□□□□□ -1.97
WHI3YNL197C GRX3Q03835 250 aa2.78□□□□□ -1.97
WHI3YNL197C ATC1Q04005 294 aa2.78□□□□□ -1.97
WHI3YNL197C MMT2Q08970 484 aa2.78□□□□□ -1.97
WHI3YNL197C ERP3Q12403 225 aa2.78□□□□□ -1.97
WHI3YNL197C YOL085CQ99345 113 aa2.78□□□□□ -1.97
WHI3YNL197C MRPL20P22354 195 aaPredicted RBP2.77□□□□□ -1.97
WHI3YNL197C YSR3P23501 404 aa2.77□□□□□ -1.97
WHI3YNL197C YOX1P34161 385 aa2.77□□□□□ -1.97
WHI3YNL197C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
WHI3YNL197C SMP1P38128 452 aa2.77□□□□□ -1.97
WHI3YNL197C COA1P40452 197 aa2.77□□□□□ -1.97
WHI3YNL197C AGX1P43567 385 aa2.77□□□□□ -1.97
WHI3YNL197C YPT32P51996 222 aaKnown RBP2.77□□□□□ -1.97
WHI3YNL197C PAL1Q05518 499 aaKnown RBP2.77□□□□□ -1.97
WHI3YNL197C GMC2Q06201 188 aa2.77□□□□□ -1.97
WHI3YNL197C GPN3Q06543 272 aa2.77□□□□□ -1.97
WHI3YNL197C DTD1Q07648 150 aaKnown RBP2.77□□□□□ -1.97
WHI3YNL197C YBL111CQ3E7Y5 667 aa2.77□□□□□ -1.97
WHI3YNL197C BI3Q9ZZW7 517 aa2.77□□□□□ -1.97
WHI3YNL197C RPP0P05317 312 aaKnown RBP2.76□□□□□ -1.97
WHI3YNL197C TFS1P14306 219 aa2.76□□□□□ -1.97
WHI3YNL197C BGL2P15703 313 aaKnown RBP2.76□□□□□ -1.97
WHI3YNL197C TIP20P33891 701 aa2.76□□□□□ -1.97
WHI3YNL197C YKL187CP34231 750 aa2.76□□□□□ -1.97
WHI3YNL197C TAE1P38340 232 aa2.76□□□□□ -1.97
WHI3YNL197C NPT1P39683 429 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms