RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C SGT1Q08446 395 aa2.8□□□□□ -1.96
SSN8YNL025C SKI7Q08491 747 aaPredicted RBP2.8□□□□□ -1.96
SSN8YNL025C TMS1Q12116 473 aa2.8□□□□□ -1.96
SSN8YNL025C DCN1Q12395 269 aa2.8□□□□□ -1.96
SSN8YNL025C YOP1Q12402 180 aa2.8□□□□□ -1.96
SSN8YNL025C AHA1Q12449 350 aaKnown RBP2.8□□□□□ -1.96
SSN8YNL025C YCL012CQ8J0M4 134 aa2.8□□□□□ -1.96
SSN8YNL025C PET20Q99373 253 aa2.8□□□□□ -1.96
SSN8YNL025C ZWF1P11412 505 aaKnown RBP2.79□□□□□ -1.96
SSN8YNL025C CBS2P14905 389 aa2.79□□□□□ -1.96
SSN8YNL025C EXO70P19658 623 aa2.79□□□□□ -1.96
SSN8YNL025C CLB2P24869 491 aa2.79□□□□□ -1.96
SSN8YNL025C SNC1P31109 117 aa2.79□□□□□ -1.96
SSN8YNL025C UTR4P32626 227 aa2.79□□□□□ -1.96
SSN8YNL025C MRPL6P32904 214 aa2.79□□□□□ -1.96
SSN8YNL025C ATO2P32907 282 aa2.79□□□□□ -1.96
SSN8YNL025C PRX1P34227 261 aaKnown RBP2.79□□□□□ -1.96
SSN8YNL025C IST2P38250 946 aa2.79□□□□□ -1.96
SSN8YNL025C BMT2P38278 337 aa2.79□□□□□ -1.96
SSN8YNL025C OSH3P38713 996 aaKnown RBP2.79□□□□□ -1.96
SSN8YNL025C LYS1P38998 373 aaRIP-Chip data2.79□□□□□ -1.96not detected
SSN8YNL025C FAU1P40099 211 aa2.79□□□□□ -1.96
SSN8YNL025C VRG4P40107 337 aa2.79□□□□□ -1.96
SSN8YNL025C BMT5P40493 336 aa2.79□□□□□ -1.96
SSN8YNL025C YIA6P40556 373 aa2.79□□□□□ -1.96
SSN8YNL025C YGR210CP42942 411 aa2.79□□□□□ -1.96
SSN8YNL025C YFL040WP43562 540 aa2.79□□□□□ -1.96
SSN8YNL025C MOG1P47123 218 aa2.79□□□□□ -1.96
SSN8YNL025C ADO1P47143 340 aaKnown RBP2.79□□□□□ -1.96
SSN8YNL025C LYS20P48570 428 aaKnown RBP2.79□□□□□ -1.96
SSN8YNL025C BRR6P53062 197 aa2.79□□□□□ -1.96
SSN8YNL025C YGL235WP53071 178 aa2.79□□□□□ -1.96
SSN8YNL025C NQM1P53228 333 aaPredicted RBP2.79□□□□□ -1.96
SSN8YNL025C YLR460CP54007 376 aa2.79□□□□□ -1.96
SSN8YNL025C SPR6Q01684 191 aa2.79□□□□□ -1.96
SSN8YNL025C YPL080CQ02826 108 aa2.79□□□□□ -1.96
SSN8YNL025C ARO80Q04052 950 aa2.79□□□□□ -1.96
SSN8YNL025C VBA1Q04301 562 aa2.79□□□□□ -1.96
SSN8YNL025C ARC18Q05933 178 aaKnown RBP2.79□□□□□ -1.96
SSN8YNL025C SNT309Q06091 175 aaPredicted RBP2.79□□□□□ -1.96
SSN8YNL025C THI3Q07471 609 aa2.79□□□□□ -1.96
SSN8YNL025C HEM25Q07534 307 aa2.79□□□□□ -1.96
SSN8YNL025C ALE1Q08548 619 aa2.79□□□□□ -1.96
SSN8YNL025C GRE1Q08969 168 aa2.79□□□□□ -1.96
SSN8YNL025C APC9Q12107 265 aa2.79□□□□□ -1.96
SSN8YNL025C NSL1Q12143 216 aa2.79□□□□□ -1.96
SSN8YNL025C YPL150WQ12152 901 aa2.79□□□□□ -1.96
SSN8YNL025C YCT1Q12235 531 aa2.79□□□□□ -1.96
SSN8YNL025C RRP42Q12277 265 aaPredicted RBP2.79□□□□□ -1.96
SSN8YNL025C SET6Q12529 373 aa2.79□□□□□ -1.96
SSN8YNL025C ECM5Q03214 1411 aa2.78□□□□□ -1.96
SSN8YNL025C SUC2P00724 532 aa2.78□□□□□ -1.96
SSN8YNL025C MES1P00958 751 aaKnown RBP2.78□□□□□ -1.96
SSN8YNL025C CHO1P08456 276 aa2.78□□□□□ -1.96
SSN8YNL025C IMA3P0CW40 589 aa2.78□□□□□ -1.96
SSN8YNL025C IMA4P0CW41 589 aa2.78□□□□□ -1.96
SSN8YNL025C MTF1P14908 341 aaKnown RBP2.78□□□□□ -1.96
SSN8YNL025C URA6P15700 204 aa2.78□□□□□ -1.96
SSN8YNL025C SLY1P22213 666 aa2.78□□□□□ -1.96
SSN8YNL025C YCR006CP25350 157 aa2.78□□□□□ -1.96
SSN8YNL025C RPS2P25443 254 aaKnown RBP2.78□□□□□ -1.96
SSN8YNL025C MGT1P26188 188 aa2.78□□□□□ -1.96
SSN8YNL025C MKK1P32490 508 aa2.78□□□□□ -1.96
SSN8YNL025C MCH2P36032 473 aa2.78□□□□□ -1.96
SSN8YNL025C ANR2P36090 516 aaPredicted RBP2.78□□□□□ -1.96
SSN8YNL025C SHC1P39000 512 aa2.78□□□□□ -1.96
SSN8YNL025C DHH1P39517 506 aaKnown RBP2.78□□□□□ -1.96
SSN8YNL025C FAA2P39518 744 aa2.78□□□□□ -1.96
SSN8YNL025C SEN34P39707 275 aa2.78□□□□□ -1.96
SSN8YNL025C YAT2P40017 923 aa2.78□□□□□ -1.96
SSN8YNL025C MEP2P41948 499 aa2.78□□□□□ -1.96
SSN8YNL025C SNO3P43544 222 aa2.78□□□□□ -1.96
SSN8YNL025C KEG1P43614 200 aa2.78□□□□□ -1.96
SSN8YNL025C IRC7P43623 340 aa2.78□□□□□ -1.96
SSN8YNL025C YFR057WP43625 151 aa2.78□□□□□ -1.96
SSN8YNL025C YJR079WP47126 109 aa2.78□□□□□ -1.96
SSN8YNL025C NUP57P48837 541 aa2.78□□□□□ -1.96
SSN8YNL025C MGA1P53050 456 aa2.78□□□□□ -1.96
SSN8YNL025C NIF3P53081 288 aa2.78□□□□□ -1.96
SSN8YNL025C MRM2P53123 320 aa2.78□□□□□ -1.96
SSN8YNL025C SWC4P53201 476 aa2.78□□□□□ -1.96
SSN8YNL025C GPI1P53306 609 aa2.78□□□□□ -1.96
SSN8YNL025C HCH1P53834 153 aa2.78□□□□□ -1.96
SSN8YNL025C FYV6P53913 173 aa2.78□□□□□ -1.96
SSN8YNL025C NUP49Q02199 472 aa2.78□□□□□ -1.96
SSN8YNL025C ABF2Q02486 183 aa2.78□□□□□ -1.96
SSN8YNL025C TRM82Q03774 444 aa2.78□□□□□ -1.96
SSN8YNL025C CAC2Q04199 468 aa2.78□□□□□ -1.96
SSN8YNL025C RAD34Q06665 692 aa2.78□□□□□ -1.96
SSN8YNL025C SSK1Q07084 712 aa2.78□□□□□ -1.96
SSN8YNL025C IMA2Q08295 589 aa2.78□□□□□ -1.96
SSN8YNL025C POM33Q12164 279 aa2.78□□□□□ -1.96
SSN8YNL025C YDR018CQ12185 396 aa2.78□□□□□ -1.96
SSN8YNL025C SME1Q12330 94 aaPredicted RBP2.78□□□□□ -1.96
SSN8YNL025C SWI1P09547 1314 aa2.77□□□□□ -1.97
SSN8YNL025C BI2P03873 423 aa2.77□□□□□ -1.97
SSN8YNL025C RPL31AP0C2H8 113 aaKnown RBP2.77□□□□□ -1.97
SSN8YNL025C PET54P10834 293 aa2.77□□□□□ -1.97
SSN8YNL025C NHP6AP11632 93 aaKnown RBP2.77□□□□□ -1.97
SSN8YNL025C DPM1P14020 267 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms