RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C ASP3-4P0CX79 362 aa3.69□□□□□ -1.82
CUS1YMR240C ASP3-1P0CZ17 362 aa3.69□□□□□ -1.82
CUS1YMR240C SPS100P13130 326 aa3.69□□□□□ -1.82
CUS1YMR240C CBF5P33322 483 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
CUS1YMR240C MRPL27P36526 146 aaPredicted RBP3.69□□□□□ -1.82
CUS1YMR240C RCK1P38622 512 aa3.69□□□□□ -1.82
CUS1YMR240C CTM1P38818 585 aa3.69□□□□□ -1.82
CUS1YMR240C TPC1P53257 314 aa3.69□□□□□ -1.82
CUS1YMR240C YGR266WP53326 701 aa3.69□□□□□ -1.82
CUS1YMR240C KTR6P54070 446 aa3.69□□□□□ -1.82
CUS1YMR240C TPS1Q00764 495 aaKnown RBP3.69□□□□□ -1.82
CUS1YMR240C SRO7Q12038 1033 aa3.69□□□□□ -1.82
CUS1YMR240C UTP23Q12339 254 aaKnown RBP3.69□□□□□ -1.82
CUS1YMR240C IZH4Q99393 312 aa3.69□□□□□ -1.82
CUS1YMR240C STE2D6VTK4 431 aa3.68□□□□□ -1.82
CUS1YMR240C CBP6P07253 162 aaPredicted RBP3.68□□□□□ -1.82
CUS1YMR240C BGL2P15703 313 aaKnown RBP3.68□□□□□ -1.82
CUS1YMR240C MCH2P36032 473 aa3.68□□□□□ -1.82
CUS1YMR240C UTH1P36135 365 aa3.68□□□□□ -1.82
CUS1YMR240C SOP4P39543 234 aaPredicted RBP3.68□□□□□ -1.82
CUS1YMR240C KEL2P50090 882 aa3.68□□□□□ -1.82
CUS1YMR240C YGL262WP53054 175 aa3.68□□□□□ -1.82
CUS1YMR240C YNL050CP53952 270 aa3.68□□□□□ -1.82
CUS1YMR240C TLG1Q03322 224 aa3.68□□□□□ -1.82
CUS1YMR240C FMP16Q12497 93 aa3.68□□□□□ -1.82
CUS1YMR240C INO80P53115 1489 aa3.67□□□□□ -1.82
CUS1YMR240C PSK1P31374 1356 aa3.67□□□□□ -1.82
CUS1YMR240C ATP6P00854 259 aa3.67□□□□□ -1.82
CUS1YMR240C ERD1P16151 362 aa3.67□□□□□ -1.82
CUS1YMR240C CSM1P25651 190 aa3.67□□□□□ -1.82
CUS1YMR240C PRS1P32895 427 aaKnown RBP3.67□□□□□ -1.82
CUS1YMR240C HIS2P38635 335 aa3.67□□□□□ -1.82
CUS1YMR240C GGC1P38988 300 aa3.67□□□□□ -1.82
CUS1YMR240C SWC4P53201 476 aa3.67□□□□□ -1.82
CUS1YMR240C NRM1P53718 249 aa3.67□□□□□ -1.82
CUS1YMR240C SED5Q01590 340 aa3.67□□□□□ -1.82
CUS1YMR240C RPL21AQ02753 160 aaKnown RBP3.67□□□□□ -1.82
CUS1YMR240C YPL077CQ02831 240 aa3.67□□□□□ -1.82
CUS1YMR240C ADD37Q03233 198 aa3.67□□□□□ -1.82
CUS1YMR240C BER1Q06688 274 aaKnown RBP3.67□□□□□ -1.82
CUS1YMR240C MMT2Q08970 484 aa3.67□□□□□ -1.82
CUS1YMR240C RPL31AP0C2H8 113 aaKnown RBP3.66□□□□□ -1.82
CUS1YMR240C HPR1P17629 752 aaKnown RBP3.66□□□□□ -1.82
CUS1YMR240C TIP20P33891 701 aa3.66□□□□□ -1.82
CUS1YMR240C SLM1P40485 686 aa3.66□□□□□ -1.82
CUS1YMR240C AGP3P43548 558 aa3.66□□□□□ -1.82
CUS1YMR240C SDS23P53172 527 aa3.66□□□□□ -1.82
CUS1YMR240C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
CUS1YMR240C FRS2P15625 503 aaKnown RBP3.65□□□□□ -1.83
CUS1YMR240C EPT1P22140 391 aa3.65□□□□□ -1.83
CUS1YMR240C RPL16BP26785 198 aaKnown RBP3.65□□□□□ -1.83
CUS1YMR240C SPS19P32573 292 aaKnown RBP3.65□□□□□ -1.83
CUS1YMR240C YKL187CP34231 750 aa3.65□□□□□ -1.83
CUS1YMR240C SMP1P38128 452 aa3.65□□□□□ -1.83
CUS1YMR240C PET100P38958 111 aa3.65□□□□□ -1.83
CUS1YMR240C UBC13P52490 153 aa3.65□□□□□ -1.83
CUS1YMR240C YPL245WQ12179 454 aaKnown RBP3.65□□□□□ -1.83
CUS1YMR240C PRP46Q12417 451 aaPredicted RBP3.65□□□□□ -1.83
CUS1YMR240C INO2P26798 304 aa3.64□□□□□ -1.83
CUS1YMR240C ICL1P28240 557 aaPredicted RBP3.64□□□□□ -1.83
CUS1YMR240C TAE1P38340 232 aa3.64□□□□□ -1.83
CUS1YMR240C PET8P38921 284 aa3.64□□□□□ -1.83
CUS1YMR240C EMC2P47133 292 aaKnown RBP3.64□□□□□ -1.83
CUS1YMR240C VEL1P53058 206 aa3.64□□□□□ -1.83
CUS1YMR240C YGR018CP53211 109 aa3.64□□□□□ -1.83
CUS1YMR240C API2Q04413 109 aa3.64□□□□□ -1.83
CUS1YMR240C YLR446WQ06204 433 aa3.64□□□□□ -1.83
CUS1YMR240C GPN3Q06543 272 aa3.64□□□□□ -1.83
CUS1YMR240C MCH1Q07376 486 aa3.64□□□□□ -1.83
CUS1YMR240C YDR018CQ12185 396 aa3.64□□□□□ -1.83
CUS1YMR240C ERP3Q12403 225 aa3.64□□□□□ -1.83
CUS1YMR240C BI3Q9ZZW7 517 aa3.64□□□□□ -1.83
CUS1YMR240C ADH1P00330 348 aaKnown RBP3.63□□□□□ -1.83
CUS1YMR240C TDH3P00359 332 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
CUS1YMR240C TPI1P00942 248 aaKnown RBP3.63□□□□□ -1.83
CUS1YMR240C YKL063CP35725 167 aa3.63□□□□□ -1.83
CUS1YMR240C RPC37P36121 282 aa3.63□□□□□ -1.83
CUS1YMR240C MRP21P38175 177 aa3.63□□□□□ -1.83
CUS1YMR240C GDS1P41913 522 aa3.63□□□□□ -1.83
CUS1YMR240C FMP33P46998 180 aa3.63□□□□□ -1.83
CUS1YMR240C YNR066CP53752 436 aa3.63□□□□□ -1.83
CUS1YMR240C VHS1Q03785 461 aa3.63□□□□□ -1.83
CUS1YMR240C KAP95Q06142 861 aaKnown RBP3.63□□□□□ -1.83
CUS1YMR240C ASR1Q06834 288 aa3.63□□□□□ -1.83
CUS1YMR240C MIM1Q08176 113 aa3.63□□□□□ -1.83
CUS1YMR240C SGT2Q12118 346 aaKnown RBP3.63□□□□□ -1.83
CUS1YMR240C SOD1P00445 154 aaKnown RBP3.62□□□□□ -1.83
CUS1YMR240C MRPL20P22354 195 aaPredicted RBP3.62□□□□□ -1.83
CUS1YMR240C CYM1P32898 989 aa3.62□□□□□ -1.83
CUS1YMR240C MRPL37P36532 105 aa3.62□□□□□ -1.83
CUS1YMR240C YPC1P38298 316 aa3.62□□□□□ -1.83
CUS1YMR240C ECM34P38728 170 aa3.62□□□□□ -1.83
CUS1YMR240C TDA11P38854 504 aa3.62□□□□□ -1.83
CUS1YMR240C RRT13P40042 185 aa3.62□□□□□ -1.83
CUS1YMR240C SHQ1P40486 507 aaPredicted RBP3.62□□□□□ -1.83
CUS1YMR240C HIT1P46973 164 aa3.62□□□□□ -1.83
CUS1YMR240C MRX5P47007 382 aa3.62□□□□□ -1.83
CUS1YMR240C INP2Q03824 705 aa3.62□□□□□ -1.83
CUS1YMR240C RRP42Q12277 265 aaPredicted RBP3.62□□□□□ -1.83
CUS1YMR240C IFM1P25038 676 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms