RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W APE4P38821 490 aa2.02□□□□□ -2.09
CSI1YMR025W GGC1P38988 300 aa2.02□□□□□ -2.09
CSI1YMR025W RBG1P39729 369 aa2.02□□□□□ -2.09
CSI1YMR025W RTR1P40084 226 aaPredicted RBP2.02□□□□□ -2.09
CSI1YMR025W GAT3Q07928 141 aa2.02□□□□□ -2.09
CSI1YMR025W SNF2P22082 1703 aa2.02□□□□□ -2.09
CSI1YMR025W BEM2P39960 2167 aaKnown RBP2.01□□□□□ -2.09
CSI1YMR025W DAP2P18962 818 aa2.01□□□□□ -2.09
CSI1YMR025W MRPL8P22353 238 aa2.01□□□□□ -2.09
CSI1YMR025W PMT2P31382 759 aa2.01□□□□□ -2.09
CSI1YMR025W ADH5P38113 351 aaKnown RBP2.01□□□□□ -2.09
CSI1YMR025W YHR177WP38867 453 aa2.01□□□□□ -2.09
CSI1YMR025W EPL1P43572 832 aa2.01□□□□□ -2.09
CSI1YMR025W GAS2Q06135 555 aa2.01□□□□□ -2.09
CSI1YMR025W MIR1P23641 311 aaKnown RBP2□□□□□ -2.09
CSI1YMR025W YPS1P32329 569 aa2□□□□□ -2.09
CSI1YMR025W SSE1P32589 693 aaKnown RBP2□□□□□ -2.09
CSI1YMR025W AIM23P47015 356 aa2□□□□□ -2.09
CSI1YMR025W MLC1P53141 149 aa2□□□□□ -2.09
CSI1YMR025W MIX17Q03667 156 aa2□□□□□ -2.09
CSI1YMR025W IPK1Q06667 281 aa2□□□□□ -2.09
CSI1YMR025W NFI1Q12216 726 aa2□□□□□ -2.09
CSI1YMR025W CUP2P15315 225 aa1.99□□□□□ -2.09
CSI1YMR025W CPT1P17898 393 aa1.99□□□□□ -2.09
CSI1YMR025W MKK1P32490 508 aa1.99□□□□□ -2.09
CSI1YMR025W VPH1P32563 840 aaKnown RBP1.99□□□□□ -2.09
CSI1YMR025W YMR262WP38430 313 aa1.99□□□□□ -2.09
CSI1YMR025W SPL2P38839 148 aa1.99□□□□□ -2.09
CSI1YMR025W PRM1P53835 661 aa1.99□□□□□ -2.09
CSI1YMR025W EOS1P53938 366 aa1.99□□□□□ -2.09
CSI1YMR025W SMD1Q02260 146 aaPredicted RBP1.99□□□□□ -2.09
CSI1YMR025W APC4Q04601 652 aa1.99□□□□□ -2.09
CSI1YMR025W LYS2P07702 1392 aa1.98□□□□□ -2.09
CSI1YMR025W RPS14AP06367 137 aaKnown RBP1.98□□□□□ -2.09
CSI1YMR025W POT1P27796 417 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
CSI1YMR025W TIP20P33891 701 aa1.98□□□□□ -2.09
CSI1YMR025W LAS1P36146 502 aaPredicted RBP1.98□□□□□ -2.09
CSI1YMR025W RPS14BP39516 138 aaKnown RBP1.98□□□□□ -2.09
CSI1YMR025W RGM1Q00453 211 aa1.98□□□□□ -2.09
CSI1YMR025W YLH47Q06493 454 aa1.98□□□□□ -2.09
CSI1YMR025W YFH1Q07540 174 aa1.98□□□□□ -2.09
CSI1YMR025W SHS1Q07657 551 aa1.98□□□□□ -2.09
CSI1YMR025W SKS1Q12505 502 aa1.98□□□□□ -2.09
CSI1YMR025W TFB5Q3E7C1 72 aaPredicted RBP1.98□□□□□ -2.09
CSI1YMR025W SRN2Q99176 213 aa1.98□□□□□ -2.09
CSI1YMR025W SAC3P46674 1301 aa1.97□□□□□ -2.09
CSI1YMR025W RPL6BP05739 176 aaKnown RBP1.97□□□□□ -2.09
CSI1YMR025W MIG1P27705 504 aa1.97□□□□□ -2.09
CSI1YMR025W ATG12P38316 186 aa1.97□□□□□ -2.09
CSI1YMR025W ECM14P38836 430 aa1.97□□□□□ -2.09
CSI1YMR025W YFH7P43591 353 aa1.97□□□□□ -2.09
CSI1YMR025W NAS6P50086 228 aa1.97□□□□□ -2.09
CSI1YMR025W YGL088WP53151 121 aa1.97□□□□□ -2.09
CSI1YMR025W NRM1P53718 249 aa1.97□□□□□ -2.09
CSI1YMR025W RPL6AQ02326 176 aaKnown RBP1.97□□□□□ -2.09
CSI1YMR025W IRC4Q03036 179 aa1.97□□□□□ -2.09
CSI1YMR025W YOR012WQ12351 137 aa1.97□□□□□ -2.09
CSI1YMR025W YIL177CP40434 1758 aa1.97□□□□□ -2.09
CSI1YMR025W YJL225CP40889 1758 aa1.97□□□□□ -2.09
CSI1YMR025W SWI1P09547 1314 aa1.96□□□□□ -2.1
CSI1YMR025W TOR2P32600 2474 aaKnown RBP1.96□□□□□ -2.1
CSI1YMR025W OPI1P21957 404 aa1.96□□□□□ -2.1
CSI1YMR025W UBA1P22515 1024 aaKnown RBP1.96□□□□□ -2.1
CSI1YMR025W PSO2P30620 661 aa1.96□□□□□ -2.1
CSI1YMR025W FAA1P30624 700 aaKnown RBP1.96□□□□□ -2.1
CSI1YMR025W YKR015CP36111 568 aa1.96□□□□□ -2.1
CSI1YMR025W DAD2P36162 133 aa1.96□□□□□ -2.1
CSI1YMR025W SIF2P38262 535 aa1.96□□□□□ -2.1
CSI1YMR025W YHR182WP38870 785 aa1.96□□□□□ -2.1
CSI1YMR025W VAB2P40003 282 aa1.96□□□□□ -2.1
CSI1YMR025W MPP10P47083 593 aaKnown RBP1.96□□□□□ -2.1
CSI1YMR025W YGR016WP53209 190 aa1.96□□□□□ -2.1
CSI1YMR025W UTP6Q02354 440 aaKnown RBP1.96□□□□□ -2.1
CSI1YMR025W YDR286CQ05530 114 aa1.96□□□□□ -2.1
CSI1YMR025W YPR078CQ06813 372 aa1.96□□□□□ -2.1
CSI1YMR025W PML1Q07930 204 aaPredicted RBP1.96□□□□□ -2.1
CSI1YMR025W MMT2Q08970 484 aa1.96□□□□□ -2.1
CSI1YMR025W TY3A-GQ12173 290 aa1.96□□□□□ -2.1
CSI1YMR025W FRE8Q12209 686 aa1.96□□□□□ -2.1
CSI1YMR025W SFG1Q12507 346 aa1.96□□□□□ -2.1
CSI1YMR025W TY3A-IQ99219 290 aa1.96□□□□□ -2.1
CSI1YMR025W MLP1Q02455 1875 aaKnown RBP1.96□□□□□ -2.1
CSI1YMR025W RIM15P43565 1770 aa1.95□□□□□ -2.1
CSI1YMR025W TOR1P35169 2470 aa1.95□□□□□ -2.1
CSI1YMR025W BGL2P15703 313 aaKnown RBP1.95□□□□□ -2.1
CSI1YMR025W YFL040WP43562 540 aa1.95□□□□□ -2.1
CSI1YMR025W YNR068CP53754 272 aa1.95□□□□□ -2.1
CSI1YMR025W YNL143CP53908 130 aa1.95□□□□□ -2.1
CSI1YMR025W GMC1Q04399 608 aa1.95□□□□□ -2.1
CSI1YMR025W DBP9Q06218 594 aaKnown RBP1.95□□□□□ -2.1
CSI1YMR025W YDL144CQ07589 356 aa1.95□□□□□ -2.1
CSI1YMR025W PEX27Q08580 376 aa1.95□□□□□ -2.1
CSI1YMR025W DET1Q99288 334 aaKnown RBP1.95□□□□□ -2.1
CSI1YMR025W SNF6P18888 332 aa1.94□□□□□ -2.1
CSI1YMR025W DBR1P24309 405 aaKnown RBP1.94□□□□□ -2.1
CSI1YMR025W VAM7P32912 316 aa1.94□□□□□ -2.1
CSI1YMR025W YBL028CP38202 106 aa1.94□□□□□ -2.1
CSI1YMR025W GDT1P38301 280 aaPredicted RBP1.94□□□□□ -2.1
CSI1YMR025W LYS12P40495 371 aaKnown RBP1.94□□□□□ -2.1
CSI1YMR025W SNL1P40548 159 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms