RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W SMC2P38989 1170 aaKnown RBP1.64□□□□□ -2.15
CTK3YML112W TPC1P53257 314 aa1.64□□□□□ -2.15
CTK3YML112W UTP6Q02354 440 aaKnown RBP1.64□□□□□ -2.15
CTK3YML112W YPL080CQ02826 108 aa1.64□□□□□ -2.15
CTK3YML112W VIK1Q12045 647 aa1.64□□□□□ -2.15
CTK3YML112W SGT2Q12118 346 aaKnown RBP1.64□□□□□ -2.15
CTK3YML112W YOR012WQ12351 137 aa1.64□□□□□ -2.15
CTK3YML112W TRM10Q12400 293 aa1.64□□□□□ -2.15
CTK3YML112W MRX4Q12467 430 aa1.64□□□□□ -2.15
CTK3YML112W CBP2P03874 630 aaPredicted RBP1.63□□□□□ -2.15
CTK3YML112W MET2P08465 486 aa1.63□□□□□ -2.15
CTK3YML112W DAP2P18962 818 aa1.63□□□□□ -2.15
CTK3YML112W ACB1P31787 87 aa1.63□□□□□ -2.15
CTK3YML112W ARO4P32449 370 aaKnown RBP1.63□□□□□ -2.15
CTK3YML112W PRP39P39682 629 aaKnown RBP1.63□□□□□ -2.15
CTK3YML112W EDC2P40023 145 aaPredicted RBP1.63□□□□□ -2.15
CTK3YML112W DSE1P40077 573 aa1.63□□□□□ -2.15
CTK3YML112W PMT4P46971 762 aa1.63□□□□□ -2.15
CTK3YML112W YGL114WP53134 725 aa1.63□□□□□ -2.15
CTK3YML112W AQR1P53943 586 aa1.63□□□□□ -2.15
CTK3YML112W RVB1Q03940 463 aaKnown RBP1.63□□□□□ -2.15
CTK3YML112W DXO1Q06349 442 aa1.63□□□□□ -2.15
CTK3YML112W FRE6Q12473 712 aa1.63□□□□□ -2.15
CTK3YML112W SFG1Q12507 346 aa1.63□□□□□ -2.15
CTK3YML112W REP1P03871 373 aa1.62□□□□□ -2.15
CTK3YML112W ERD1P16151 362 aa1.62□□□□□ -2.15
CTK3YML112W DAL81P21657 970 aa1.62□□□□□ -2.15
CTK3YML112W ALP1P38971 573 aa1.62□□□□□ -2.15
CTK3YML112W BTT1P40314 149 aaPredicted RBP1.62□□□□□ -2.15
CTK3YML112W YFR045WP43617 309 aa1.62□□□□□ -2.15
CTK3YML112W TAF6P53040 516 aa1.62□□□□□ -2.15
CTK3YML112W YNL143CP53908 130 aa1.62□□□□□ -2.15
CTK3YML112W MIX17Q03667 156 aa1.62□□□□□ -2.15
CTK3YML112W YDR222WQ04925 415 aa1.62□□□□□ -2.15
CTK3YML112W ARC18Q05933 178 aaKnown RBP1.62□□□□□ -2.15
CTK3YML112W BUR2Q05949 395 aa1.62□□□□□ -2.15
CTK3YML112W ERP3Q12403 225 aa1.62□□□□□ -2.15
CTK3YML112W STE3P06783 470 aa1.61□□□□□ -2.15
CTK3YML112W RSA4P25382 515 aaKnown RBP1.61□□□□□ -2.15
CTK3YML112W MRPL6P32904 214 aa1.61□□□□□ -2.15
CTK3YML112W ATG12P38316 186 aa1.61□□□□□ -2.15
CTK3YML112W PEX30Q06169 523 aa1.61□□□□□ -2.15
CTK3YML112W RDL2Q08742 149 aaKnown RBP1.61□□□□□ -2.15
CTK3YML112W SUR1P33300 382 aa1.6□□□□□ -2.15
CTK3YML112W AIM29P36154 155 aa1.6□□□□□ -2.15
CTK3YML112W YIL089WP40500 205 aa1.6□□□□□ -2.15
CTK3YML112W RSM27P53305 110 aa1.6□□□□□ -2.15
CTK3YML112W PXR1P53335 271 aaPredicted RBP1.6□□□□□ -2.15
CTK3YML112W YNL040WP53960 456 aaPredicted RBP1.6□□□□□ -2.15
CTK3YML112W CLP1Q08685 445 aaPredicted RBP1.6□□□□□ -2.15
CTK3YML112W SPO24Q3E752 67 aa1.6□□□□□ -2.15
CTK3YML112W TAL1P15019 335 aaKnown RBP1.59□□□□□ -2.15
CTK3YML112W SAG1P20840 650 aa1.59□□□□□ -2.15
CTK3YML112W BUD2P33314 1104 aa1.59□□□□□ -2.15
CTK3YML112W LAS1P36146 502 aaPredicted RBP1.59□□□□□ -2.15
CTK3YML112W FYV8P46949 817 aaKnown RBP1.59□□□□□ -2.15
CTK3YML112W CUE3P53137 624 aaKnown RBP1.59□□□□□ -2.15
CTK3YML112W RGM1Q00453 211 aa1.59□□□□□ -2.15
CTK3YML112W MIM1Q08176 113 aa1.59□□□□□ -2.15
CTK3YML112W TDH2P00358 332 aaKnown RBP1.58□□□□□ -2.16
CTK3YML112W TDH3P00359 332 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
CTK3YML112W YOL163WP0CF20 169 aa1.58□□□□□ -2.16
CTK3YML112W SPS100P13130 326 aa1.58□□□□□ -2.16
CTK3YML112W YAK1P14680 807 aa1.58□□□□□ -2.16
CTK3YML112W KRE1P17260 313 aa1.58□□□□□ -2.16
CTK3YML112W IFM1P25038 676 aa1.58□□□□□ -2.16
CTK3YML112W ADH5P38113 351 aaKnown RBP1.58□□□□□ -2.16
CTK3YML112W YGR168CP53293 376 aa1.58□□□□□ -2.16
CTK3YML112W YNR066CP53752 436 aa1.58□□□□□ -2.16
CTK3YML112W ACT1P60010 375 aaKnown RBP1.58□□□□□ -2.16
CTK3YML112W IRC4Q03036 179 aa1.58□□□□□ -2.16
CTK3YML112W DBP9Q06218 594 aaKnown RBP1.58□□□□□ -2.16
CTK3YML112W PFK27Q12471 397 aaPredicted RBP1.58□□□□□ -2.16
CTK3YML112W RNR2P09938 399 aaKnown RBP1.57□□□□□ -2.16
CTK3YML112W SNF6P18888 332 aa1.57□□□□□ -2.16
CTK3YML112W VPH2P32341 215 aa1.57□□□□□ -2.16
CTK3YML112W SYF2P53277 215 aaPredicted RBP1.57□□□□□ -2.16
CTK3YML112W YLR012CQ07927 99 aa1.57□□□□□ -2.16
CTK3YML112W YDR262WQ12331 272 aa1.57□□□□□ -2.16
CTK3YML112W UTP23Q12339 254 aaKnown RBP1.57□□□□□ -2.16
CTK3YML112W LAG2Q92325 660 aa1.57□□□□□ -2.16
CTK3YML112W RRT12P25381 491 aa1.56□□□□□ -2.16
CTK3YML112W CAB3P36076 571 aa1.56□□□□□ -2.16
CTK3YML112W UBX2Q04228 584 aa1.56□□□□□ -2.16
CTK3YML112W FEX1Q08913 375 aa1.56□□□□□ -2.16
CTK3YML112W FEX2Q08991 375 aa1.56□□□□□ -2.16
CTK3YML112W ZRT1P32804 376 aa1.55□□□□□ -2.16
CTK3YML112W YHR035WP38769 630 aa1.55□□□□□ -2.16
CTK3YML112W YER084WP40057 128 aa1.55□□□□□ -2.16
CTK3YML112W LIF1P53150 421 aa1.55□□□□□ -2.16
CTK3YML112W SEC13Q04491 297 aaKnown RBP1.55□□□□□ -2.16
CTK3YML112W YOR292CQ08743 309 aa1.55□□□□□ -2.16
CTK3YML112W IMP1P28627 190 aa1.54□□□□□ -2.16
CTK3YML112W YPS1P32329 569 aa1.54□□□□□ -2.16
CTK3YML112W GCG1P32656 232 aaKnown RBP1.54□□□□□ -2.16
CTK3YML112W CDC13P32797 924 aaKnown RBP1.54□□□□□ -2.16
CTK3YML112W YBL081WP38180 368 aaKnown RBP1.54□□□□□ -2.16
CTK3YML112W MED6P38782 295 aa1.54□□□□□ -2.16
CTK3YML112W PET8P38921 284 aa1.54□□□□□ -2.16
CTK3YML112W SOP4P39543 234 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms