RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C ASP3-3P0CX78 362 aa5.21□□□□□ -1.58
ATG17YLR423C ASP3-4P0CX79 362 aa5.21□□□□□ -1.58
ATG17YLR423C ASP3-1P0CZ17 362 aa5.21□□□□□ -1.58
ATG17YLR423C YSR3P23501 404 aa5.21□□□□□ -1.58
ATG17YLR423C ASR1Q06834 288 aa5.21□□□□□ -1.58
ATG17YLR423C TMC1Q08422 150 aaPredicted RBP5.21□□□□□ -1.58
ATG17YLR423C SRO7Q12038 1033 aa5.21□□□□□ -1.58
ATG17YLR423C TFC7Q12415 435 aa5.21□□□□□ -1.58
ATG17YLR423C FOL3Q12676 427 aaPredicted RBP5.21□□□□□ -1.58
ATG17YLR423C BGL2P15703 313 aaKnown RBP5.2□□□□□ -1.58
ATG17YLR423C PDC2P32896 925 aa5.2□□□□□ -1.58
ATG17YLR423C RCY1P39531 840 aa5.2□□□□□ -1.58
ATG17YLR423C YIA6P40556 373 aa5.2□□□□□ -1.58
ATG17YLR423C SPP2Q02521 185 aa5.2□□□□□ -1.58
ATG17YLR423C MRX11Q03079 207 aa5.2□□□□□ -1.58
ATG17YLR423C ATC1Q04005 294 aa5.2□□□□□ -1.58
ATG17YLR423C RPN8Q08723 338 aaKnown RBP5.2□□□□□ -1.58
ATG17YLR423C POM33Q12164 279 aa5.2□□□□□ -1.58
ATG17YLR423C COX4P04037 155 aa5.19□□□□□ -1.58
ATG17YLR423C RPL31AP0C2H8 113 aaKnown RBP5.19□□□□□ -1.58
ATG17YLR423C YKL063CP35725 167 aa5.19□□□□□ -1.58
ATG17YLR423C SHE1P38200 338 aa5.19□□□□□ -1.58
ATG17YLR423C CHL4P38907 458 aa5.19□□□□□ -1.58
ATG17YLR423C PET100P38958 111 aa5.19□□□□□ -1.58
ATG17YLR423C KTR6P54070 446 aa5.19□□□□□ -1.58
ATG17YLR423C YPL077CQ02831 240 aa5.19□□□□□ -1.58
ATG17YLR423C RRN5Q02983 363 aa5.19□□□□□ -1.58
ATG17YLR423C YLL007CQ07799 665 aa5.19□□□□□ -1.58
ATG17YLR423C YOR376WQ08900 122 aa5.19□□□□□ -1.58
ATG17YLR423C ILV1P00927 576 aaKnown RBP5.18□□□□□ -1.58
ATG17YLR423C SKG6P32900 734 aaPredicted RBP5.18□□□□□ -1.58
ATG17YLR423C SOP4P39543 234 aaPredicted RBP5.18□□□□□ -1.58
ATG17YLR423C VHT1P53241 593 aa5.18□□□□□ -1.58
ATG17YLR423C FAR10Q06001 478 aa5.18□□□□□ -1.58
ATG17YLR423C RRT8Q08219 342 aa5.18□□□□□ -1.58
ATG17YLR423C MMT2Q08970 484 aa5.18□□□□□ -1.58
ATG17YLR423C SSK22P25390 1331 aaPredicted RBP5.18□□□□□ -1.58
ATG17YLR423C FRS2P15625 503 aaKnown RBP5.17□□□□□ -1.58
ATG17YLR423C MRPL20P22354 195 aaPredicted RBP5.17□□□□□ -1.58
ATG17YLR423C CBF5P33322 483 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
ATG17YLR423C MCH2P36032 473 aa5.17□□□□□ -1.58
ATG17YLR423C PRE5P40302 234 aaKnown RBP5.17□□□□□ -1.58
ATG17YLR423C SLM1P40485 686 aa5.17□□□□□ -1.58
ATG17YLR423C YGL039WP53183 348 aaKnown RBP5.17□□□□□ -1.58
ATG17YLR423C ATP6P00854 259 aa5.16□□□□□ -1.58
ATG17YLR423C REV1P12689 985 aa5.16□□□□□ -1.58
ATG17YLR423C VPS1P21576 704 aaKnown RBP5.16□□□□□ -1.58
ATG17YLR423C COT1P32798 439 aa5.16□□□□□ -1.58
ATG17YLR423C TPO5P36029 618 aa5.16□□□□□ -1.58
ATG17YLR423C SMC2P38989 1170 aaKnown RBP5.16□□□□□ -1.58
ATG17YLR423C FMP33P46998 180 aa5.16□□□□□ -1.58
ATG17YLR423C RPL21AQ02753 160 aaKnown RBP5.16□□□□□ -1.58
ATG17YLR423C SCS7Q03529 384 aa5.16□□□□□ -1.58
ATG17YLR423C MHR1Q06630 226 aa5.16□□□□□ -1.58
ATG17YLR423C YPR064WQ12492 139 aa5.16□□□□□ -1.58
ATG17YLR423C HPR1P17629 752 aaKnown RBP5.15□□□□□ -1.59
ATG17YLR423C PCL1P24867 279 aa5.15□□□□□ -1.59
ATG17YLR423C RPC37P36121 282 aa5.15□□□□□ -1.59
ATG17YLR423C SHE3P38272 425 aaKnown RBP5.15□□□□□ -1.59
ATG17YLR423C VEL1P53058 206 aa5.15□□□□□ -1.59
ATG17YLR423C TPC1P53257 314 aa5.15□□□□□ -1.59
ATG17YLR423C HAL1Q01766 294 aa5.15□□□□□ -1.59
ATG17YLR423C MRPS16Q02608 121 aa5.15□□□□□ -1.59
ATG17YLR423C RMI1Q02685 241 aa5.15□□□□□ -1.59
ATG17YLR423C MCH1Q07376 486 aa5.15□□□□□ -1.59
ATG17YLR423C YPL245WQ12179 454 aaKnown RBP5.15□□□□□ -1.59
ATG17YLR423C EPT1P22140 391 aa5.14□□□□□ -1.59
ATG17YLR423C YPC1P38298 316 aa5.14□□□□□ -1.59
ATG17YLR423C EFM1P38732 585 aa5.14□□□□□ -1.59
ATG17YLR423C GMC2Q06201 188 aa5.14□□□□□ -1.59
ATG17YLR423C YOL107WQ12239 342 aa5.14□□□□□ -1.59
ATG17YLR423C BI3Q9ZZW7 517 aa5.14□□□□□ -1.59
ATG17YLR423C TDH3P00359 332 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
ATG17YLR423C GCG1P32656 232 aaKnown RBP5.13□□□□□ -1.59
ATG17YLR423C RCK1P38622 512 aa5.13□□□□□ -1.59
ATG17YLR423C PET8P38921 284 aa5.13□□□□□ -1.59
ATG17YLR423C GGC1P38988 300 aa5.13□□□□□ -1.59
ATG17YLR423C GDS1P41913 522 aa5.13□□□□□ -1.59
ATG17YLR423C UBC13P52490 153 aa5.13□□□□□ -1.59
ATG17YLR423C YGL262WP53054 175 aa5.13□□□□□ -1.59
ATG17YLR423C YPS5P53057 165 aa5.13□□□□□ -1.59
ATG17YLR423C LAG2Q92325 660 aa5.13□□□□□ -1.59
ATG17YLR423C TDH1P00360 332 aaKnown RBP5.12□□□□□ -1.59
ATG17YLR423C LDB16P25587 256 aa5.12□□□□□ -1.59
ATG17YLR423C TAE1P38340 232 aa5.12□□□□□ -1.59
ATG17YLR423C SCC4P40090 624 aa5.12□□□□□ -1.59
ATG17YLR423C SHQ1P40486 507 aaPredicted RBP5.12□□□□□ -1.59
ATG17YLR423C YLR152CP54072 576 aa5.12□□□□□ -1.59
ATG17YLR423C ADD37Q03233 198 aa5.12□□□□□ -1.59
ATG17YLR423C GMC1Q04399 608 aa5.12□□□□□ -1.59
ATG17YLR423C BTS1Q12051 335 aa5.12□□□□□ -1.59
ATG17YLR423C PSK1P31374 1356 aa5.12□□□□□ -1.59
ATG17YLR423C RSR1P13856 272 aa5.11□□□□□ -1.59
ATG17YLR423C IFM1P25038 676 aa5.11□□□□□ -1.59
ATG17YLR423C SPS19P32573 292 aaKnown RBP5.11□□□□□ -1.59
ATG17YLR423C CPD1P53314 239 aa5.11□□□□□ -1.59
ATG17YLR423C YLR446WQ06204 433 aa5.11□□□□□ -1.59
ATG17YLR423C UTH1P36135 365 aa5.1□□□□□ -1.59
ATG17YLR423C TIS11P47977 285 aa5.1□□□□□ -1.59
ATG17YLR423C KAP114P53067 1004 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 71 ms