RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YPR195CQ06594 109 aa1.65□□□□□ -2.15
SEC22YLR268W YDR018CQ12185 396 aa1.65□□□□□ -2.15
SEC22YLR268W MDY2Q12285 212 aa1.65□□□□□ -2.15
SEC22YLR268W ZRT1P32804 376 aa1.64□□□□□ -2.15
SEC22YLR268W CYM1P32898 989 aa1.64□□□□□ -2.15
SEC22YLR268W DBP7P36120 742 aaKnown RBP1.64□□□□□ -2.15
SEC22YLR268W RFT1P38206 574 aaPredicted RBP1.64□□□□□ -2.15
SEC22YLR268W RCK1P38622 512 aa1.64□□□□□ -2.15
SEC22YLR268W YHR035WP38769 630 aa1.64□□□□□ -2.15
SEC22YLR268W YIR035CP40579 254 aa1.64□□□□□ -2.15
SEC22YLR268W UFE1P41834 346 aa1.64□□□□□ -2.15
SEC22YLR268W YFL040WP43562 540 aa1.64□□□□□ -2.15
SEC22YLR268W LOH1P47055 219 aa1.64□□□□□ -2.15
SEC22YLR268W TPC1P53257 314 aa1.64□□□□□ -2.15
SEC22YLR268W VOA1P53262 265 aa1.64□□□□□ -2.15
SEC22YLR268W DBP6P53734 629 aaKnown RBP1.64□□□□□ -2.15
SEC22YLR268W UBX2Q04228 584 aa1.64□□□□□ -2.15
SEC22YLR268W MRX8Q05473 314 aa1.64□□□□□ -2.15
SEC22YLR268W SAM4Q08985 325 aaKnown RBP1.64□□□□□ -2.15
SEC22YLR268W CAR2P07991 424 aaKnown RBP1.63□□□□□ -2.15
SEC22YLR268W ERD1P16151 362 aa1.63□□□□□ -2.15
SEC22YLR268W CKA2P19454 339 aa1.63□□□□□ -2.15
SEC22YLR268W YKL187CP34231 750 aa1.63□□□□□ -2.15
SEC22YLR268W FET3P38993 636 aa1.63□□□□□ -2.15
SEC22YLR268W MNN9P39107 395 aaKnown RBP1.63□□□□□ -2.15
SEC22YLR268W FRT2P39734 528 aa1.63□□□□□ -2.15
SEC22YLR268W RRG9P40156 214 aa1.63□□□□□ -2.15
SEC22YLR268W RIB4P50861 169 aaPredicted RBP1.63□□□□□ -2.15
SEC22YLR268W SDS23P53172 527 aa1.63□□□□□ -2.15
SEC22YLR268W OKP1P53298 406 aa1.63□□□□□ -2.15
SEC22YLR268W YGR266WP53326 701 aa1.63□□□□□ -2.15
SEC22YLR268W INP1Q03694 420 aa1.63□□□□□ -2.15
SEC22YLR268W INP2Q03824 705 aa1.63□□□□□ -2.15
SEC22YLR268W APC4Q04601 652 aa1.63□□□□□ -2.15
SEC22YLR268W RRG8Q06109 277 aa1.63□□□□□ -2.15
SEC22YLR268W CUR1Q06469 252 aa1.63□□□□□ -2.15
SEC22YLR268W YPL245WQ12179 454 aaKnown RBP1.63□□□□□ -2.15
SEC22YLR268W PAA1Q12447 191 aaKnown RBP1.63□□□□□ -2.15
SEC22YLR268W SAR1P20606 190 aaKnown RBP1.62□□□□□ -2.15
SEC22YLR268W MRPL20P22354 195 aaPredicted RBP1.62□□□□□ -2.15
SEC22YLR268W RPL5P26321 297 aaKnown RBP1.62□□□□□ -2.15
SEC22YLR268W ZRT3P34240 503 aa1.62□□□□□ -2.15
SEC22YLR268W FRM2P37261 193 aa1.62□□□□□ -2.15
SEC22YLR268W PET8P38921 284 aa1.62□□□□□ -2.15
SEC22YLR268W SOP4P39543 234 aaPredicted RBP1.62□□□□□ -2.15
SEC22YLR268W BDH1P39714 382 aa1.62□□□□□ -2.15
SEC22YLR268W YIL054WP40524 105 aa1.62□□□□□ -2.15
SEC22YLR268W CDC40P40968 455 aaPredicted RBP1.62□□□□□ -2.15
SEC22YLR268W MIC19P43594 170 aa1.62□□□□□ -2.15
SEC22YLR268W COX16P47081 118 aa1.62□□□□□ -2.15
SEC22YLR268W FMP48P53233 369 aa1.62□□□□□ -2.15
SEC22YLR268W ARP5P53946 755 aa1.62□□□□□ -2.15
SEC22YLR268W YMR244WQ04018 355 aa1.62□□□□□ -2.15
SEC22YLR268W SNX41Q04053 625 aa1.62□□□□□ -2.15
SEC22YLR268W GMC1Q04399 608 aa1.62□□□□□ -2.15
SEC22YLR268W VAC14Q06708 880 aa1.62□□□□□ -2.15
SEC22YLR268W PBP4Q07362 185 aaKnown RBP1.62□□□□□ -2.15
SEC22YLR268W MIM1Q08176 113 aa1.62□□□□□ -2.15
SEC22YLR268W APC9Q12107 265 aa1.62□□□□□ -2.15
SEC22YLR268W UTP23Q12339 254 aaKnown RBP1.62□□□□□ -2.15
SEC22YLR268W TRM10Q12400 293 aa1.62□□□□□ -2.15
SEC22YLR268W DCP1Q12517 231 aaPredicted RBP1.62□□□□□ -2.15
SEC22YLR268W DFM1Q12743 341 aaKnown RBP1.62□□□□□ -2.15
SEC22YLR268W IZH4Q99393 312 aa1.62□□□□□ -2.15
SEC22YLR268W RAD7P06779 565 aa1.61□□□□□ -2.15
SEC22YLR268W FUS3P16892 353 aaKnown RBP1.61□□□□□ -2.15
SEC22YLR268W COX10P21592 462 aa1.61□□□□□ -2.15
SEC22YLR268W RPL16BP26785 198 aaKnown RBP1.61□□□□□ -2.15
SEC22YLR268W INO2P26798 304 aa1.61□□□□□ -2.15
SEC22YLR268W SKG6P32900 734 aaPredicted RBP1.61□□□□□ -2.15
SEC22YLR268W RPC25P35718 212 aa1.61□□□□□ -2.15
SEC22YLR268W TRR2P38816 342 aa1.61□□□□□ -2.15
SEC22YLR268W DSE1P40077 573 aa1.61□□□□□ -2.15
SEC22YLR268W SLM1P40485 686 aa1.61□□□□□ -2.15
SEC22YLR268W LOC1P43586 204 aaPredicted RBP1.61□□□□□ -2.15
SEC22YLR268W SWC4P53201 476 aa1.61□□□□□ -2.15
SEC22YLR268W HST4P53688 370 aa1.61□□□□□ -2.15
SEC22YLR268W VTI1Q04338 217 aa1.61□□□□□ -2.15
SEC22YLR268W YMR111CQ04461 462 aaPredicted RBP1.61□□□□□ -2.15
SEC22YLR268W DIB1Q06819 143 aaPredicted RBP1.61□□□□□ -2.15
SEC22YLR268W VIK1Q12045 647 aa1.61□□□□□ -2.15
SEC22YLR268W TFC7Q12415 435 aa1.61□□□□□ -2.15
SEC22YLR268W PFK27Q12471 397 aaPredicted RBP1.61□□□□□ -2.15
SEC22YLR268W LAG2Q92325 660 aa1.61□□□□□ -2.15
SEC22YLR268W TDH3P00359 332 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
SEC22YLR268W MCH2P36032 473 aa1.6□□□□□ -2.15
SEC22YLR268W SWD2P36104 329 aaPredicted RBP1.6□□□□□ -2.15
SEC22YLR268W YMR262WP38430 313 aa1.6□□□□□ -2.15
SEC22YLR268W YGL118CP53132 145 aa1.6□□□□□ -2.15
SEC22YLR268W CAX4P53223 239 aa1.6□□□□□ -2.15
SEC22YLR268W BIO4P53630 237 aa1.6□□□□□ -2.15
SEC22YLR268W YNR066CP53752 436 aa1.6□□□□□ -2.15
SEC22YLR268W SMD1Q02260 146 aaPredicted RBP1.6□□□□□ -2.15
SEC22YLR268W SEC13Q04491 297 aaKnown RBP1.6□□□□□ -2.15
SEC22YLR268W ECM19Q06011 112 aa1.6□□□□□ -2.15
SEC22YLR268W YDL211CQ12121 372 aa1.6□□□□□ -2.15
SEC22YLR268W SIA1Q12212 622 aa1.6□□□□□ -2.15
SEC22YLR268W UGA1P17649 471 aa1.59□□□□□ -2.15
SEC22YLR268W CPT1P17898 393 aa1.59□□□□□ -2.15
SEC22YLR268W IFM1P25038 676 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms