RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C PAD1P33751 242 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
SHB17YKR043C MRPL39P36533 70 aa9.07□□□□□ -0.96
SHB17YKR043C RPS20P38701 121 aaKnown RBP9.07□□□□□ -0.96
SHB17YKR043C TOK1P40310 691 aa9.07□□□□□ -0.96
SHB17YKR043C COG5P53951 403 aa9.07□□□□□ -0.96
SHB17YKR043C KAP120Q02932 1032 aa9.07□□□□□ -0.96
SHB17YKR043C YMR099CQ03161 297 aaKnown RBP9.07□□□□□ -0.96
SHB17YKR043C YMR265CQ03508 461 aaKnown RBP9.07□□□□□ -0.96
SHB17YKR043C COQ11Q05892 277 aa9.07□□□□□ -0.96
SHB17YKR043C RSA3Q05942 220 aaKnown RBP9.07□□□□□ -0.96
SHB17YKR043C RCN2Q12044 265 aa9.07□□□□□ -0.96
SHB17YKR043C FOL3Q12676 427 aaPredicted RBP9.07□□□□□ -0.96
SHB17YKR043C YPL119C-AQ3E751 87 aa9.07□□□□□ -0.96
SHB17YKR043C HMG1P12683 1054 aa9.06□□□□□ -0.96
SHB17YKR043C THI4P32318 326 aa9.06□□□□□ -0.96
SHB17YKR043C AIM3P38266 947 aaKnown RBP9.06□□□□□ -0.96
SHB17YKR043C MTC6P38849 526 aa9.06□□□□□ -0.96
SHB17YKR043C VMA10P48836 114 aaKnown RBP9.06□□□□□ -0.96
SHB17YKR043C YDL180WQ12301 547 aa9.06□□□□□ -0.96
SHB17YKR043C MHF1Q3E835 90 aa9.06□□□□□ -0.96
SHB17YKR043C CDC36P06100 191 aaPredicted RBP9.05□□□□□ -0.96
SHB17YKR043C HEM4P06174 275 aa9.05□□□□□ -0.96
SHB17YKR043C RPL5P26321 297 aaKnown RBP9.05□□□□□ -0.96
SHB17YKR043C RPC82P32349 654 aa9.05□□□□□ -0.96
SHB17YKR043C MCM10P32354 571 aa9.05□□□□□ -0.96
SHB17YKR043C SOF1P33750 489 aaKnown RBP9.05□□□□□ -0.96
SHB17YKR043C ISC1P40015 477 aaKnown RBP9.05□□□□□ -0.96
SHB17YKR043C POP1P41812 875 aa9.05□□□□□ -0.96
SHB17YKR043C ADO1P47143 340 aaKnown RBP9.05□□□□□ -0.96
SHB17YKR043C RSM24Q03976 319 aa9.05□□□□□ -0.96
SHB17YKR043C HMS1Q12398 434 aa9.05□□□□□ -0.96
SHB17YKR043C SAM35P14693 329 aa9.04□□□□□ -0.96
SHB17YKR043C FAR1P21268 830 aa9.04□□□□□ -0.96
SHB17YKR043C GAS1P22146 559 aaKnown RBP9.04□□□□□ -0.96
SHB17YKR043C YBR138CP38277 524 aa9.04□□□□□ -0.96
SHB17YKR043C CHL4P38907 458 aa9.04□□□□□ -0.96
SHB17YKR043C SEN34P39707 275 aa9.04□□□□□ -0.96
SHB17YKR043C MPH1P40562 993 aa9.04□□□□□ -0.96
SHB17YKR043C SWP82P43554 623 aa9.04□□□□□ -0.96
SHB17YKR043C MON1P53129 644 aa9.04□□□□□ -0.96
SHB17YKR043C RRN9P53437 365 aa9.04□□□□□ -0.96
SHB17YKR043C OST6Q03723 332 aa9.04□□□□□ -0.96
SHB17YKR043C RAF1Q06891 181 aa9.04□□□□□ -0.96
SHB17YKR043C YHR214C-EQ8TGK0 99 aa9.04□□□□□ -0.96
SHB17YKR043C MET2P08465 486 aa9.03□□□□□ -0.96
SHB17YKR043C TAL1P15019 335 aaKnown RBP9.03□□□□□ -0.96
SHB17YKR043C ATG15P25641 520 aa9.03□□□□□ -0.96
SHB17YKR043C PPA2P28239 310 aa9.03□□□□□ -0.96
SHB17YKR043C OAC1P32332 324 aa9.03□□□□□ -0.96
SHB17YKR043C ARN2P38724 620 aa9.03□□□□□ -0.96
SHB17YKR043C MLH1P38920 769 aa9.03□□□□□ -0.96
SHB17YKR043C MRPL19P53875 158 aa9.03□□□□□ -0.96
SHB17YKR043C YMD8Q03697 442 aa9.03□□□□□ -0.96
SHB17YKR043C AGE1Q04412 482 aa9.03□□□□□ -0.96
SHB17YKR043C SIA1Q12212 622 aa9.03□□□□□ -0.96
SHB17YKR043C DBP10Q12389 995 aaKnown RBP9.03□□□□□ -0.96
SHB17YKR043C SEC12P11655 471 aa9.02□□□□□ -0.97
SHB17YKR043C RPI1P23250 407 aaKnown RBP9.02□□□□□ -0.97
SHB17YKR043C CAM1P29547 415 aaKnown RBP9.02□□□□□ -0.97
SHB17YKR043C YBR285WP38354 144 aa9.02□□□□□ -0.97
SHB17YKR043C GPP1P41277 250 aaKnown RBP9.02□□□□□ -0.97
SHB17YKR043C SAM37P50110 327 aa9.02□□□□□ -0.97
SHB17YKR043C PXR1P53335 271 aaPredicted RBP9.02□□□□□ -0.97
SHB17YKR043C MKC7P53379 596 aa9.02□□□□□ -0.97
SHB17YKR043C PGA1P53896 198 aa9.02□□□□□ -0.97
SHB17YKR043C MRP51Q02950 344 aa9.02□□□□□ -0.97
SHB17YKR043C SPC19Q03954 165 aa9.02□□□□□ -0.97
SHB17YKR043C API2Q04413 109 aa9.02□□□□□ -0.97
SHB17YKR043C YPQ2Q06328 317 aa9.02□□□□□ -0.97
SHB17YKR043C YOR289WQ12012 251 aaPredicted RBP9.02□□□□□ -0.97
SHB17YKR043C YCL002CP25565 263 aa9.01□□□□□ -0.97
SHB17YKR043C SBA1P28707 216 aaKnown RBP9.01□□□□□ -0.97
SHB17YKR043C YER184CP39961 794 aa9.01□□□□□ -0.97
SHB17YKR043C APM1Q00776 475 aaPredicted RBP9.01□□□□□ -0.97
SHB17YKR043C NUP116Q02630 1113 aa9.01□□□□□ -0.97
SHB17YKR043C YDR102CQ03864 110 aa9.01□□□□□ -0.97
SHB17YKR043C YLR345WQ06137 509 aa9.01□□□□□ -0.97
SHB17YKR043C CTS2Q06350 511 aa9.01□□□□□ -0.97
SHB17YKR043C MLC2Q06580 163 aa9.01□□□□□ -0.97
SHB17YKR043C MIM1Q08176 113 aa9.01□□□□□ -0.97
SHB17YKR043C IDP2P41939 412 aa9□□□□□ -0.97
SHB17YKR043C SSY5P47002 699 aa9□□□□□ -0.97
SHB17YKR043C PCP1P53259 346 aa9□□□□□ -0.97
SHB17YKR043C ELA1P53861 379 aaPredicted RBP9□□□□□ -0.97
SHB17YKR043C BNA7Q04066 261 aa9□□□□□ -0.97
SHB17YKR043C TAZ1Q06510 381 aa9□□□□□ -0.97
SHB17YKR043C RTC5Q12108 567 aaKnown RBP9□□□□□ -0.97
SHB17YKR043C MED2Q12124 431 aa9□□□□□ -0.97
SHB17YKR043C NKP1Q12493 238 aa9□□□□□ -0.97
SHB17YKR043C NFT1P0CE68 1218 aa8.99□□□□□ -0.97
SHB17YKR043C SPO7P18410 259 aa8.99□□□□□ -0.97
SHB17YKR043C PHO80P20052 293 aa8.99□□□□□ -0.97
SHB17YKR043C EXG1P23776 448 aaKnown RBP8.99□□□□□ -0.97
SHB17YKR043C GIT1P25346 518 aa8.99□□□□□ -0.97
SHB17YKR043C VPH2P32341 215 aa8.99□□□□□ -0.97
SHB17YKR043C YHL037CP38733 133 aa8.99□□□□□ -0.97
SHB17YKR043C ZRG8P40021 1076 aa8.99□□□□□ -0.97
SHB17YKR043C YTA6P40328 754 aa8.99□□□□□ -0.97
SHB17YKR043C YFL051CP43552 160 aa8.99□□□□□ -0.97
SHB17YKR043C COS10P52924 374 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms