RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W FES1P38260 290 aa2.1□□□□□ -2.07
SNU114YKL173W POP7P38291 140 aa2.1□□□□□ -2.07
SNU114YKL173W YMR262WP38430 313 aa2.1□□□□□ -2.07
SNU114YKL173W YJL118WP47022 219 aa2.1□□□□□ -2.07
SNU114YKL173W YNL181WP53878 407 aa2.1□□□□□ -2.07
SNU114YKL173W CDC14Q00684 551 aa2.1□□□□□ -2.07
SNU114YKL173W SPC24Q04477 213 aa2.1□□□□□ -2.07
SNU114YKL173W YDR222WQ04925 415 aa2.1□□□□□ -2.07
SNU114YKL173W HCR1Q05775 265 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W CDC123Q05791 360 aa2.1□□□□□ -2.07
SNU114YKL173W TIM18Q08749 192 aa2.1□□□□□ -2.07
SNU114YKL173W TPT1Q12272 230 aaKnown RBP2.1□□□□□ -2.07
SNU114YKL173W YOP1Q12402 180 aa2.1□□□□□ -2.07
SNU114YKL173W VPS13Q07878 3144 aa2.1□□□□□ -2.07
SNU114YKL173W ADH2P00331 348 aaKnown RBP2.09□□□□□ -2.07
SNU114YKL173W TPK3P05986 398 aa2.09□□□□□ -2.07
SNU114YKL173W ATP1P07251 545 aaKnown RBP2.09□□□□□ -2.07
SNU114YKL173W HEM15P16622 393 aa2.09□□□□□ -2.07
SNU114YKL173W CHA1P25379 360 aaKnown RBP2.09□□□□□ -2.07
SNU114YKL173W YEF1P32622 495 aa2.09□□□□□ -2.07
SNU114YKL173W SHC1P39000 512 aa2.09□□□□□ -2.07
SNU114YKL173W YER137CP40083 148 aaKnown RBP2.09□□□□□ -2.07
SNU114YKL173W JLP2P40206 208 aa2.09□□□□□ -2.07
SNU114YKL173W YNL260CP53846 198 aa2.09□□□□□ -2.07
SNU114YKL173W NOP13P53883 403 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SNU114YKL173W BUR2Q05949 395 aa2.09□□□□□ -2.07
SNU114YKL173W YDL109CQ12103 647 aa2.09□□□□□ -2.07
SNU114YKL173W YOL107WQ12239 342 aa2.09□□□□□ -2.07
SNU114YKL173W YCL012CQ8J0M4 134 aa2.09□□□□□ -2.07
SNU114YKL173W GLN3P18494 730 aa2.09□□□□□ -2.07
SNU114YKL173W RPO26P20435 155 aa2.09□□□□□ -2.07
SNU114YKL173W MEI4P29467 408 aa2.09□□□□□ -2.07
SNU114YKL173W DBP7P36120 742 aaKnown RBP2.09□□□□□ -2.07
SNU114YKL173W MET30P39014 640 aa2.09□□□□□ -2.07
SNU114YKL173W SLX9P53251 210 aaPredicted RBP2.09□□□□□ -2.07
SNU114YKL173W MKC7P53379 596 aa2.09□□□□□ -2.07
SNU114YKL173W MRP51Q02950 344 aa2.09□□□□□ -2.07
SNU114YKL173W BCH1Q05029 724 aa2.09□□□□□ -2.07
SNU114YKL173W REX4Q08237 289 aa2.09□□□□□ -2.07
SNU114YKL173W MSH5Q12175 901 aa2.09□□□□□ -2.07
SNU114YKL173W PAB1P04147 577 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
SNU114YKL173W DPB2P24482 689 aaPredicted RBP2.09□□□□□ -2.08
SNU114YKL173W RBK1P25332 333 aa2.09□□□□□ -2.08
SNU114YKL173W GIT1P25346 518 aa2.09□□□□□ -2.08
SNU114YKL173W CSE1P33307 960 aa2.09□□□□□ -2.08
SNU114YKL173W DOA1P36037 715 aa2.09□□□□□ -2.08
SNU114YKL173W MMS21P38632 267 aa2.09□□□□□ -2.08
SNU114YKL173W YAP3P38749 330 aa2.09□□□□□ -2.08
SNU114YKL173W YGR210CP42942 411 aa2.09□□□□□ -2.08
SNU114YKL173W SAD1P43589 448 aa2.09□□□□□ -2.08
SNU114YKL173W AZR1P50080 613 aa2.09□□□□□ -2.08
SNU114YKL173W TAF6P53040 516 aa2.09□□□□□ -2.08
SNU114YKL173W YGR168CP53293 376 aa2.09□□□□□ -2.08
SNU114YKL173W OKP1P53298 406 aa2.09□□□□□ -2.08
SNU114YKL173W SPP2Q02521 185 aa2.09□□□□□ -2.08
SNU114YKL173W UBX2Q04228 584 aa2.09□□□□□ -2.08
SNU114YKL173W ECI1Q05871 280 aa2.09□□□□□ -2.08
SNU114YKL173W YTH1Q06102 208 aaPredicted RBP2.09□□□□□ -2.08
SNU114YKL173W UBA3Q99344 299 aa2.09□□□□□ -2.08
SNU114YKL173W MATALPHA1P0CY06 175 aa2.08□□□□□ -2.08
SNU114YKL173W HMLALPHA1P0CY07 175 aa2.08□□□□□ -2.08
SNU114YKL173W NAM9P27929 486 aa2.08□□□□□ -2.08
SNU114YKL173W VPS51P36116 164 aa2.08□□□□□ -2.08
SNU114YKL173W YBR056WP38081 501 aa2.08□□□□□ -2.08
SNU114YKL173W YER121WP40076 114 aa2.08□□□□□ -2.08
SNU114YKL173W YIL169CP40442 995 aa2.08□□□□□ -2.08
SNU114YKL173W ICE2P40499 491 aa2.08□□□□□ -2.08
SNU114YKL173W YIR016WP40572 265 aa2.08□□□□□ -2.08
SNU114YKL173W AZF1P41696 914 aa2.08□□□□□ -2.08
SNU114YKL173W LSM1P47017 172 aaKnown RBP2.08□□□□□ -2.08
SNU114YKL173W SNX4P47057 423 aa2.08□□□□□ -2.08
SNU114YKL173W YJR056CP47115 236 aa2.08□□□□□ -2.08
SNU114YKL173W SSN8P47821 323 aa2.08□□□□□ -2.08
SNU114YKL173W SPR6Q01684 191 aa2.08□□□□□ -2.08
SNU114YKL173W BET5Q03630 159 aa2.08□□□□□ -2.08
SNU114YKL173W CCE1Q03702 353 aa2.08□□□□□ -2.08
SNU114YKL173W YLR281CQ05863 155 aa2.08□□□□□ -2.08
SNU114YKL173W GPN3Q06543 272 aa2.08□□□□□ -2.08
SNU114YKL173W YEH2Q07950 538 aa2.08□□□□□ -2.08
SNU114YKL173W BSC6Q08280 497 aa2.08□□□□□ -2.08
SNU114YKL173W ESA1Q08649 445 aa2.08□□□□□ -2.08
SNU114YKL173W SLM3Q12093 417 aa2.08□□□□□ -2.08
SNU114YKL173W YMR230W-AQ3E7B5 62 aa2.08□□□□□ -2.08
SNU114YKL173W REV1P12689 985 aa2.08□□□□□ -2.08
SNU114YKL173W ARF2P19146 181 aaKnown RBP2.08□□□□□ -2.08
SNU114YKL173W ZRC1P20107 442 aa2.08□□□□□ -2.08
SNU114YKL173W SLY1P22213 666 aa2.08□□□□□ -2.08
SNU114YKL173W OPY1P38271 328 aa2.08□□□□□ -2.08
SNU114YKL173W MTC4P38335 694 aaKnown RBP2.08□□□□□ -2.08
SNU114YKL173W RFC4P40339 323 aaKnown RBP2.08□□□□□ -2.08
SNU114YKL173W RPR2P40571 144 aa2.08□□□□□ -2.08
SNU114YKL173W APS3P47064 194 aa2.08□□□□□ -2.08
SNU114YKL173W TRM112P53738 135 aaPredicted RBP2.08□□□□□ -2.08
SNU114YKL173W MTQ1P53944 314 aa2.08□□□□□ -2.08
SNU114YKL173W MRS2Q01926 470 aa2.08□□□□□ -2.08
SNU114YKL173W MYO5Q04439 1219 aaKnown RBP2.08□□□□□ -2.08
SNU114YKL173W SPO77Q06134 477 aa2.08□□□□□ -2.08
SNU114YKL173W NDE2Q07500 545 aa2.08□□□□□ -2.08
SNU114YKL173W ALE1Q08548 619 aa2.08□□□□□ -2.08
SNU114YKL173W FIG2P25653 1609 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms