RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C YKL063CP35725 167 aa1.92□□□□□ -2.1
SHE2YKL130C COS9P36034 407 aa1.92□□□□□ -2.1
SHE2YKL130C ANR2P36090 516 aaPredicted RBP1.92□□□□□ -2.1
SHE2YKL130C DTR1P38125 572 aa1.92□□□□□ -2.1
SHE2YKL130C RCK2P38623 610 aa1.92□□□□□ -2.1
SHE2YKL130C PTI1P39927 425 aaPredicted RBP1.92□□□□□ -2.1
SHE2YKL130C SCC4P40090 624 aa1.92□□□□□ -2.1
SHE2YKL130C YGR210CP42942 411 aa1.92□□□□□ -2.1
SHE2YKL130C YFL040WP43562 540 aa1.92□□□□□ -2.1
SHE2YKL130C MOB2P43563 287 aa1.92□□□□□ -2.1
SHE2YKL130C AGX1P43567 385 aa1.92□□□□□ -2.1
SHE2YKL130C PMT4P46971 762 aa1.92□□□□□ -2.1
SHE2YKL130C FMP33P46998 180 aa1.92□□□□□ -2.1
SHE2YKL130C KAP114P53067 1004 aa1.92□□□□□ -2.1
SHE2YKL130C SDT1P53078 280 aa1.92□□□□□ -2.1
SHE2YKL130C SWC4P53201 476 aa1.92□□□□□ -2.1
SHE2YKL130C TIM11P81449 96 aaPredicted RBP1.92□□□□□ -2.1
SHE2YKL130C SED5Q01590 340 aa1.92□□□□□ -2.1
SHE2YKL130C SNX41Q04053 625 aa1.92□□□□□ -2.1
SHE2YKL130C YLR173WQ06247 608 aa1.92□□□□□ -2.1
SHE2YKL130C YLR012CQ07927 99 aa1.92□□□□□ -2.1
SHE2YKL130C TMC1Q08422 150 aaPredicted RBP1.92□□□□□ -2.1
SHE2YKL130C RDL2Q08742 149 aaKnown RBP1.92□□□□□ -2.1
SHE2YKL130C FDH1Q08911 376 aa1.92□□□□□ -2.1
SHE2YKL130C PLP2Q12017 286 aa1.92□□□□□ -2.1
SHE2YKL130C BTS1Q12051 335 aa1.92□□□□□ -2.1
SHE2YKL130C SLM3Q12093 417 aa1.92□□□□□ -2.1
SHE2YKL130C RUD3Q12234 484 aaKnown RBP1.92□□□□□ -2.1
SHE2YKL130C YOL107WQ12239 342 aa1.92□□□□□ -2.1
SHE2YKL130C SFM1Q12314 213 aa1.92□□□□□ -2.1
SHE2YKL130C UTP23Q12339 254 aaKnown RBP1.92□□□□□ -2.1
SHE2YKL130C RPN6Q12377 434 aa1.92□□□□□ -2.1
SHE2YKL130C PRM4Q12498 284 aa1.92□□□□□ -2.1
SHE2YKL130C IQG1Q12280 1495 aa1.92□□□□□ -2.1
SHE2YKL130C PDR10P51533 1564 aa1.92□□□□□ -2.1
SHE2YKL130C SSK22P25390 1331 aaPredicted RBP1.91□□□□□ -2.1
SHE2YKL130C BUD3P25558 1636 aa1.91□□□□□ -2.1
SHE2YKL130C NUP157P40064 1391 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C STE7P06784 515 aa1.91□□□□□ -2.1
SHE2YKL130C HPR1P17629 752 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C VPS1P21576 704 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C RPL16BP26785 198 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C NAM9P27929 486 aa1.91□□□□□ -2.1
SHE2YKL130C NUP2P32499 720 aa1.91□□□□□ -2.1
SHE2YKL130C GCG1P32656 232 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C YKL071WP36086 256 aa1.91□□□□□ -2.1
SHE2YKL130C YER186CP40101 306 aa1.91□□□□□ -2.1
SHE2YKL130C EGT2P42835 1041 aa1.91□□□□□ -2.1
SHE2YKL130C ATG18P43601 500 aa1.91□□□□□ -2.1
SHE2YKL130C AIM23P47015 356 aa1.91□□□□□ -2.1
SHE2YKL130C BNS1P50084 137 aa1.91□□□□□ -2.1
SHE2YKL130C SUR7P54003 302 aa1.91□□□□□ -2.1
SHE2YKL130C SLT2Q00772 484 aa1.91□□□□□ -2.1
SHE2YKL130C SKI8Q02793 397 aaPredicted RBP1.91□□□□□ -2.1
SHE2YKL130C CWC21Q03375 135 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C YHC1Q05900 231 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C ASR1Q06834 288 aa1.91□□□□□ -2.1
SHE2YKL130C MRX9Q07349 420 aaKnown RBP1.91□□□□□ -2.1
SHE2YKL130C MFG1Q07684 458 aa1.91□□□□□ -2.1
SHE2YKL130C ATP16Q12165 160 aa1.91□□□□□ -2.1
SHE2YKL130C VTH1P40438 1549 aa1.91□□□□□ -2.1
SHE2YKL130C VTH2P40890 1549 aa1.91□□□□□ -2.1
SHE2YKL130C ILV1P00927 576 aaKnown RBP1.9□□□□□ -2.11
SHE2YKL130C RPL31AP0C2H8 113 aaKnown RBP1.9□□□□□ -2.11
SHE2YKL130C ERD1P16151 362 aa1.9□□□□□ -2.11
SHE2YKL130C AAT2P23542 418 aaKnown RBP1.9□□□□□ -2.11
SHE2YKL130C DEP1P31385 405 aa1.9□□□□□ -2.11
SHE2YKL130C PDC2P32896 925 aa1.9□□□□□ -2.11
SHE2YKL130C MCH2P36032 473 aa1.9□□□□□ -2.11
SHE2YKL130C RPC37P36121 282 aa1.9□□□□□ -2.11
SHE2YKL130C RFS1P38234 210 aaKnown RBP1.9□□□□□ -2.11
SHE2YKL130C TAE1P38340 232 aa1.9□□□□□ -2.11
SHE2YKL130C SOP4P39543 234 aaPredicted RBP1.9□□□□□ -2.11
SHE2YKL130C OXA1P39952 402 aa1.9□□□□□ -2.11
SHE2YKL130C AIM10P39965 576 aaKnown RBP1.9□□□□□ -2.11
SHE2YKL130C PRP38Q00723 242 aaPredicted RBP1.9□□□□□ -2.11
SHE2YKL130C YET2Q04210 160 aa1.9□□□□□ -2.11
SHE2YKL130C RLP24Q07915 199 aaKnown RBP1.9□□□□□ -2.11
SHE2YKL130C TAF10Q12030 206 aa1.9□□□□□ -2.11
SHE2YKL130C RRP42Q12277 265 aaPredicted RBP1.9□□□□□ -2.11
SHE2YKL130C MCT1Q12283 360 aa1.9□□□□□ -2.11
SHE2YKL130C BNI1P41832 1953 aa1.9□□□□□ -2.11
SHE2YKL130C MHP1P43638 1398 aa1.89□□□□□ -2.11
SHE2YKL130C SAL1D6W196 494 aa1.89□□□□□ -2.11
SHE2YKL130C TDH3P00359 332 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
SHE2YKL130C COX2P00410 251 aa1.89□□□□□ -2.11
SHE2YKL130C MSF1P08425 469 aa1.89□□□□□ -2.11
SHE2YKL130C POL30P15873 258 aaKnown RBP1.89□□□□□ -2.11
SHE2YKL130C DAL82P21705 255 aa1.89□□□□□ -2.11
SHE2YKL130C IFM1P25038 676 aa1.89□□□□□ -2.11
SHE2YKL130C CDC50P25656 391 aa1.89□□□□□ -2.11
SHE2YKL130C INO2P26798 304 aa1.89□□□□□ -2.11
SHE2YKL130C NTG1P31378 399 aa1.89□□□□□ -2.11
SHE2YKL130C PMT2P31382 759 aa1.89□□□□□ -2.11
SHE2YKL130C MRPL10P36520 322 aa1.89□□□□□ -2.11
SHE2YKL130C SOL2P37262 315 aa1.89□□□□□ -2.11
SHE2YKL130C HSM3P38348 480 aa1.89□□□□□ -2.11
SHE2YKL130C BFR1P38934 470 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11 RIP-Chip
SHE2YKL130C PRM9P39551 298 aa1.89□□□□□ -2.11
SHE2YKL130C PEX22P39718 180 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms