RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C HAS1Q03532 505 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C RPC11Q04307 110 aaPredicted RBP1.97□□□□□ -2.09
UFD4YKL010C COQ10Q08058 207 aa1.97□□□□□ -2.09
UFD4YKL010C ATP16Q12165 160 aa1.97□□□□□ -2.09
UFD4YKL010C RPN5Q12250 445 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C SUS1Q6WNK7 96 aa1.97□□□□□ -2.09
UFD4YKL010C CYC7P00045 113 aa1.97□□□□□ -2.09
UFD4YKL010C GCN4P03069 281 aa1.97□□□□□ -2.09
UFD4YKL010C FLP1P03870 423 aa1.97□□□□□ -2.09
UFD4YKL010C HIS5P07172 385 aa1.97□□□□□ -2.09
UFD4YKL010C HTS1P07263 546 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C YCR100CP25606 316 aa1.97□□□□□ -2.09
UFD4YKL010C PET112P33893 541 aa1.97□□□□□ -2.09
UFD4YKL010C PRM5P40476 318 aa1.97□□□□□ -2.09
UFD4YKL010C MEP3P53390 489 aa1.97□□□□□ -2.09
UFD4YKL010C MRPL13Q02204 264 aa1.97□□□□□ -2.09
UFD4YKL010C FDC1Q03034 503 aa1.97□□□□□ -2.09
UFD4YKL010C TSR2Q06672 205 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C YLR031WQ07978 186 aa1.97□□□□□ -2.09
UFD4YKL010C YNG1Q08465 219 aa1.97□□□□□ -2.09
UFD4YKL010C RAX1Q08760 435 aa1.97□□□□□ -2.09
UFD4YKL010C MMT2Q08970 484 aa1.97□□□□□ -2.09
UFD4YKL010C BTS1Q12051 335 aa1.97□□□□□ -2.09
UFD4YKL010C YLR111WQ12528 110 aa1.97□□□□□ -2.09
UFD4YKL010C CET1O13297 549 aaPredicted RBP1.96□□□□□ -2.1
UFD4YKL010C BUD5P25300 642 aaPredicted RBP1.96□□□□□ -2.1
UFD4YKL010C HOM6P31116 359 aaKnown RBP1.96□□□□□ -2.1
UFD4YKL010C SFP1P32432 683 aa1.96□□□□□ -2.1
UFD4YKL010C ERG24P32462 438 aaKnown RBP1.96□□□□□ -2.1
UFD4YKL010C SIP1P32578 815 aa1.96□□□□□ -2.1
UFD4YKL010C RPC34P32910 317 aa1.96□□□□□ -2.1
UFD4YKL010C MRPL36P36531 177 aa1.96□□□□□ -2.1
UFD4YKL010C SDS24P38314 527 aa1.96□□□□□ -2.1
UFD4YKL010C BIG1P38813 335 aa1.96□□□□□ -2.1
UFD4YKL010C PFS1P38872 237 aa1.96□□□□□ -2.1
UFD4YKL010C ARF3P40994 183 aaRIP-Chip data1.96□□□□□ -2.1 RIP-Chip
UFD4YKL010C BUD8P41698 603 aa1.96□□□□□ -2.1
UFD4YKL010C NNF1P47149 201 aa1.96□□□□□ -2.1
UFD4YKL010C EMC4P53073 190 aa1.96□□□□□ -2.1
UFD4YKL010C MAK3Q03503 176 aa1.96□□□□□ -2.1
UFD4YKL010C UTP21Q06078 939 aaPredicted RBP1.96□□□□□ -2.1
UFD4YKL010C SYM1Q06563 197 aa1.96□□□□□ -2.1
UFD4YKL010C AVO1Q08236 1176 aa1.96□□□□□ -2.1
UFD4YKL010C INP53Q12271 1107 aa1.96□□□□□ -2.1
UFD4YKL010C RGT2Q12300 763 aa1.96□□□□□ -2.1
UFD4YKL010C DFG16Q99234 619 aa1.96□□□□□ -2.1
UFD4YKL010C HXT2P23585 541 aa1.96□□□□□ -2.1
UFD4YKL010C TEF4P36008 412 aaKnown RBP1.96□□□□□ -2.1
UFD4YKL010C SDS22P36047 338 aa1.96□□□□□ -2.1
UFD4YKL010C CBP4P37267 147 aa1.96□□□□□ -2.1
UFD4YKL010C DTR1P38125 572 aa1.96□□□□□ -2.1
UFD4YKL010C PAU24P38155 120 aa1.96□□□□□ -2.1
UFD4YKL010C XBP1P40489 647 aa1.96□□□□□ -2.1
UFD4YKL010C SMK1P41808 388 aa1.96□□□□□ -2.1
UFD4YKL010C ATG18P43601 500 aa1.96□□□□□ -2.1
UFD4YKL010C TYW3P53177 273 aa1.96□□□□□ -2.1
UFD4YKL010C GTF1P53260 183 aaPredicted RBP1.96□□□□□ -2.1
UFD4YKL010C FHN1P53279 174 aa1.96□□□□□ -2.1
UFD4YKL010C PLP1Q04004 230 aa1.96□□□□□ -2.1
UFD4YKL010C PDR8Q06149 701 aa1.96□□□□□ -2.1
UFD4YKL010C MCH4Q08268 501 aa1.96□□□□□ -2.1
UFD4YKL010C YLR108CQ12259 485 aa1.96□□□□□ -2.1
UFD4YKL010C YDR034W-BQ6Q5X2 51 aa1.96□□□□□ -2.1
UFD4YKL010C FSH3Q99369 266 aa1.96□□□□□ -2.1
UFD4YKL010C RPL6BP05739 176 aaKnown RBP1.96□□□□□ -2.1
UFD4YKL010C RPB10P22139 70 aa1.96□□□□□ -2.1
UFD4YKL010C RPL24BP24000 155 aaKnown RBP1.96□□□□□ -2.1
UFD4YKL010C LDS1P31379 325 aa1.96□□□□□ -2.1
UFD4YKL010C PTR2P32901 601 aa1.96□□□□□ -2.1
UFD4YKL010C SUI1P32911 108 aaKnown RBP1.96□□□□□ -2.1
UFD4YKL010C OAR1P35731 278 aa1.96□□□□□ -2.1
UFD4YKL010C YIL152WP40455 235 aa1.96□□□□□ -2.1
UFD4YKL010C SDT1P53078 280 aa1.96□□□□□ -2.1
UFD4YKL010C NIF3P53081 288 aa1.96□□□□□ -2.1
UFD4YKL010C MET31Q03081 177 aa1.96□□□□□ -2.1
UFD4YKL010C EST3Q03096 181 aa1.96□□□□□ -2.1
UFD4YKL010C CTL1Q03220 320 aaKnown RBP1.96□□□□□ -2.1
UFD4YKL010C CAC2Q04199 468 aa1.96□□□□□ -2.1
UFD4YKL010C COA4Q05809 96 aa1.96□□□□□ -2.1
UFD4YKL010C ARV1Q06541 321 aa1.96□□□□□ -2.1
UFD4YKL010C GLE1Q12315 538 aa1.96□□□□□ -2.1
UFD4YKL010C NAG1Q8TGN9 163 aa1.96□□□□□ -2.1
UFD4YKL010C AAC1P04710 309 aa1.95□□□□□ -2.1
UFD4YKL010C ERS1P17261 260 aa1.95□□□□□ -2.1
UFD4YKL010C NPR1P22211 790 aa1.95□□□□□ -2.1
UFD4YKL010C GPI12P23797 304 aa1.95□□□□□ -2.1
UFD4YKL010C HCM1P25364 564 aa1.95□□□□□ -2.1
UFD4YKL010C PHM8P40025 321 aa1.95□□□□□ -2.1
UFD4YKL010C GLR1P41921 483 aaKnown RBP1.95□□□□□ -2.1
UFD4YKL010C COG7P53195 279 aa1.95□□□□□ -2.1
UFD4YKL010C REC102Q02721 264 aa1.95□□□□□ -2.1
UFD4YKL010C PRM15Q03262 622 aa1.95□□□□□ -2.1
UFD4YKL010C GPN3Q06543 272 aa1.95□□□□□ -2.1
UFD4YKL010C YPR172WQ06608 200 aa1.95□□□□□ -2.1
UFD4YKL010C YPR091CQ06833 770 aa1.95□□□□□ -2.1
UFD4YKL010C YPD1Q07688 167 aa1.95□□□□□ -2.1
UFD4YKL010C PEX27Q08580 376 aa1.95□□□□□ -2.1
UFD4YKL010C REX3Q12090 404 aa1.95□□□□□ -2.1
UFD4YKL010C RTK1Q12100 620 aaPredicted RBP1.95□□□□□ -2.1
UFD4YKL010C DSF1P0CX08 502 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms