RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NMD5	YJR132W	YKL033W-A	Q86ZR7	236 aa		6.27	□□□□□ -1.41
NMD5	YJR132W	RPS16A	P0CX51	143 aa	Known RBP	6.26	□□□□□ -1.41
NMD5	YJR132W	RPS16B	P0CX52	143 aa	Known RBP	6.26	□□□□□ -1.41
NMD5	YJR132W	POX1	P13711	748 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	YNK1	P36010	153 aa	Known RBP	6.26	□□□□□ -1.41
NMD5	YJR132W	YKR051W	P36142	418 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	PRS4	P38063	326 aa	Predicted RBP	6.26	□□□□□ -1.41
NMD5	YJR132W	CHL4	P38907	458 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	SDP1	P40479	209 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	SPG5	P42933	373 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	ZAP1	P47043	880 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	AIF1	P52923	378 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	NIF3	P53081	288 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	INN1	P53901	409 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	AIM34	Q03673	198 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	DED1	P06634	604 aa	Known RBP	6.26	□□□□□ -1.41
NMD5	YJR132W	YMR31	P19955	123 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	YCR023C	P25351	611 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	EMP70	P32802	667 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	COS9	P36034	407 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	TOS1	P38288	455 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	VBA2	P38358	474 aa	Known RBP	6.26	□□□□□ -1.41
NMD5	YJR132W	RRG9	P40156	214 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	YIR016W	P40572	265 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	GLO1	P50107	326 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	STD1	Q02794	444 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	SDH7	Q04401	133 aa		6.26	□□□□□ -1.41
NMD5	YJR132W	LPX1	Q12405	387 aa	Known RBP	6.26	□□□□□ -1.41
NMD5	YJR132W	GAL10	P04397	699 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	MIP6	P38760	659 aa	Known RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	YHR127W	P38833	243 aa	Known RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	HXT13	P39924	564 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	HXT17	P53631	564 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	HXT15	P54854	567 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	SMX3	P54999	86 aa	Predicted RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	UBC7	Q02159	165 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	SPP2	Q02521	185 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	YET3	Q07451	203 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	UPC2	Q12151	913 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	ATP14	Q12349	124 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	VTH1	P40438	1549 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	VTH2	P40890	1549 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	MF(ALPHA)1	P01149	165 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	RPP0	P05317	312 aa	Known RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
NMD5	YJR132W	DSE1	P40077	573 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	AAD14	P42884	376 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	SUT1	P53032	299 aa	Known RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	YMR160W	Q03823	816 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	FCF2	Q12035	217 aa	Predicted RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	SEC7	P11075	2009 aa	Known RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	CPR1	P14832	162 aa	Known RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	PPZ1	P26570	692 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	MDL2	P33311	773 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	PET10	P36139	283 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	YBL029W	P38201	376 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	IPI1	P38803	334 aa	Predicted RBP	6.25	□□□□□ -1.41
NMD5	YJR132W	YHR210C	P38893	341 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	RPA43	P46669	326 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	MED7	Q08278	222 aa		6.25	□□□□□ -1.41
NMD5	YJR132W	HIP1	P06775	603 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	NTH1	P32356	751 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	ARP2	P32381	391 aa	Known RBP	6.24	□□□□□ -1.41
NMD5	YJR132W	UTR2	P32623	467 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	SKN7	P38889	622 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	YAL037W	P39728	267 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	UTP7	P40055	554 aa	Known RBP	6.24	□□□□□ -1.41
NMD5	YJR132W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
NMD5	YJR132W	ERJ5	P43613	295 aa	Predicted RBP	6.24	□□□□□ -1.41
NMD5	YJR132W	STE24	P47154	453 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	EFM6	P53970	246 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	YPL068C	Q02749	293 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	CAC2	Q04199	468 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	NBP2	Q12163	236 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	ECM3	Q99252	613 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	PDR12	Q02785	1511 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	TY3B-G	Q99315	1547 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	MAG1	P22134	296 aa	Known RBP	6.24	□□□□□ -1.41
NMD5	YJR132W	SYN8	P31377	255 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	SKG6	P32900	734 aa	Predicted RBP	6.24	□□□□□ -1.41
NMD5	YJR132W	THI80	P35202	319 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	DRE2	P36152	348 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	CBP4	P37267	147 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	ARP1	P38696	384 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	ARN1	P38731	627 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	JAC1	P53193	184 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
NMD5	YJR132W	IZH1	Q03419	316 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	AAD4	Q07747	329 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	ERG27	Q12452	347 aa	Known RBP	6.24	□□□□□ -1.41
NMD5	YJR132W	RMD5	Q12508	421 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	UBA3	Q99344	299 aa		6.24	□□□□□ -1.41
NMD5	YJR132W	RPA190	P10964	1664 aa	Known RBP	6.24	□□□□□ -1.41
NMD5	YJR132W	RPN13	O13563	156 aa		6.23	□□□□□ -1.41
NMD5	YJR132W	FRE1	P32791	686 aa		6.23	□□□□□ -1.41
NMD5	YJR132W	HYR1	P40581	163 aa	Known RBP	6.23	□□□□□ -1.41
NMD5	YJR132W	IKS1	P47042	667 aa		6.23	□□□□□ -1.41
NMD5	YJR132W	COS10	P52924	374 aa		6.23	□□□□□ -1.41
NMD5	YJR132W	IDP3	P53982	420 aa	Known RBP	6.23	□□□□□ -1.41
NMD5	YJR132W	IRC10	Q08118	586 aa		6.23	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms