RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM27, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM27YGR215W VTI1Q04338 217 aa2.43□□□□□ -2.02
RSM27YGR215W YDR262WQ12331 272 aa2.43□□□□□ -2.02
RSM27YGR215W ERD1P16151 362 aa2.42□□□□□ -2.02
RSM27YGR215W YKL187CP34231 750 aa2.42□□□□□ -2.02
RSM27YGR215W LIN1P38852 340 aaPredicted RBP2.42□□□□□ -2.02
RSM27YGR215W SLM1P40485 686 aa2.42□□□□□ -2.02
RSM27YGR215W MIC19P43594 170 aa2.42□□□□□ -2.02
RSM27YGR215W HRT1Q08273 121 aa2.42□□□□□ -2.02
RSM27YGR215W TFC7Q12415 435 aa2.42□□□□□ -2.02
RSM27YGR215W PRP46Q12417 451 aaPredicted RBP2.42□□□□□ -2.02
RSM27YGR215W YPR096CO13587 100 aa2.41□□□□□ -2.02
RSM27YGR215W RNR2P09938 399 aaKnown RBP2.41□□□□□ -2.02
RSM27YGR215W NAS2P40555 220 aa2.41□□□□□ -2.02
RSM27YGR215W YJL144WP47009 104 aa2.41□□□□□ -2.02
RSM27YGR215W YDR222WQ04925 415 aa2.41□□□□□ -2.02
RSM27YGR215W DIB1Q06819 143 aaPredicted RBP2.41□□□□□ -2.02
RSM27YGR215W PRM4Q12498 284 aa2.41□□□□□ -2.02
RSM27YGR215W RPL18AP0CX49 186 aaKnown RBP2.4□□□□□ -2.03
RSM27YGR215W RPL18BP0CX50 186 aaKnown RBP2.4□□□□□ -2.03
RSM27YGR215W GAL3P13045 520 aa2.4□□□□□ -2.03
RSM27YGR215W YNR066CP53752 436 aa2.4□□□□□ -2.03
RSM27YGR215W GTO3Q04806 366 aa2.4□□□□□ -2.03
RSM27YGR215W YDR286CQ05530 114 aa2.4□□□□□ -2.03
RSM27YGR215W DTD1Q07648 150 aaKnown RBP2.4□□□□□ -2.03
RSM27YGR215W DAL5P15365 543 aa2.39□□□□□ -2.03
RSM27YGR215W SUR1P33300 382 aa2.39□□□□□ -2.03
RSM27YGR215W FYV8P46949 817 aaKnown RBP2.39□□□□□ -2.03
RSM27YGR215W TRM10Q12400 293 aa2.39□□□□□ -2.03
RSM27YGR215W CBP2P03874 630 aaPredicted RBP2.38□□□□□ -2.03
RSM27YGR215W INO2P26798 304 aa2.38□□□□□ -2.03
RSM27YGR215W ACB1P31787 87 aa2.38□□□□□ -2.03
RSM27YGR215W BUD2P33314 1104 aa2.38□□□□□ -2.03
RSM27YGR215W UIP5P36137 443 aa2.38□□□□□ -2.03
RSM27YGR215W ECM14P38836 430 aa2.38□□□□□ -2.03
RSM27YGR215W ASP1P38986 381 aaPredicted RBP2.38□□□□□ -2.03
RSM27YGR215W SHE4P51534 789 aa2.38□□□□□ -2.03
RSM27YGR215W YGR016WP53209 190 aa2.38□□□□□ -2.03
RSM27YGR215W YPL080CQ02826 108 aa2.38□□□□□ -2.03
RSM27YGR215W IRC4Q03036 179 aa2.38□□□□□ -2.03
RSM27YGR215W STE23Q06010 1027 aa2.38□□□□□ -2.03
RSM27YGR215W YLR012CQ07927 99 aa2.38□□□□□ -2.03
RSM27YGR215W YPL264CQ08980 353 aa2.38□□□□□ -2.03
RSM27YGR215W YPL245WQ12179 454 aaKnown RBP2.38□□□□□ -2.03
RSM27YGR215W HPR1P17629 752 aaKnown RBP2.37□□□□□ -2.03
RSM27YGR215W DAL81P21657 970 aa2.37□□□□□ -2.03
RSM27YGR215W YPS1P32329 569 aa2.37□□□□□ -2.03
RSM27YGR215W ZRT1P32804 376 aa2.37□□□□□ -2.03
RSM27YGR215W PPQ1P32945 549 aa2.37□□□□□ -2.03
RSM27YGR215W DXO1Q06349 442 aa2.37□□□□□ -2.03
RSM27YGR215W YPR063CQ12160 140 aa2.37□□□□□ -2.03
RSM27YGR215W CDC42P19073 191 aa2.36□□□□□ -2.03
RSM27YGR215W TKL2P33315 681 aa2.36□□□□□ -2.03
RSM27YGR215W EDC2P40023 145 aaPredicted RBP2.36□□□□□ -2.03
RSM27YGR215W ECO1P43605 281 aa2.36□□□□□ -2.03
RSM27YGR215W YOR292CQ08743 309 aa2.36□□□□□ -2.03
RSM27YGR215W IES3Q12345 250 aa2.36□□□□□ -2.03
RSM27YGR215W ERP3Q12403 225 aa2.36□□□□□ -2.03
RSM27YGR215W ARO4P32449 370 aaKnown RBP2.35□□□□□ -2.03
RSM27YGR215W YKL162CP36052 402 aa2.35□□□□□ -2.03
RSM27YGR215W SOP4P39543 234 aaPredicted RBP2.35□□□□□ -2.03
RSM27YGR215W AIM20P40451 204 aa2.35□□□□□ -2.03
RSM27YGR215W ACT1P60010 375 aaKnown RBP2.35□□□□□ -2.03
RSM27YGR215W SNX41Q04053 625 aa2.35□□□□□ -2.03
RSM27YGR215W UBX2Q04228 584 aa2.35□□□□□ -2.03
RSM27YGR215W CSI1Q04368 295 aa2.35□□□□□ -2.03
RSM27YGR215W YMR111CQ04461 462 aaPredicted RBP2.35□□□□□ -2.03
RSM27YGR215W SEC13Q04491 297 aaKnown RBP2.35□□□□□ -2.03
RSM27YGR215W PGC1Q08959 321 aa2.35□□□□□ -2.03
RSM27YGR215W SAM4Q08985 325 aaKnown RBP2.35□□□□□ -2.03
RSM27YGR215W VIK1Q12045 647 aa2.35□□□□□ -2.03
RSM27YGR215W ALK2P32789 676 aaPredicted RBP2.34□□□□□ -2.03
RSM27YGR215W GPX1P36014 167 aa2.34□□□□□ -2.03
RSM27YGR215W SDH4P37298 181 aa2.34□□□□□ -2.03
RSM27YGR215W YBR062CP38239 180 aa2.34□□□□□ -2.03
RSM27YGR215W SMC2P38989 1170 aaKnown RBP2.34□□□□□ -2.03
RSM27YGR215W CAJ1P39101 391 aa2.34□□□□□ -2.03
RSM27YGR215W UTP25P40498 721 aaKnown RBP2.34□□□□□ -2.03
RSM27YGR215W YIL012WP40551 113 aa2.34□□□□□ -2.03
RSM27YGR215W YFL040WP43562 540 aa2.34□□□□□ -2.03
RSM27YGR215W PBP4Q07362 185 aaKnown RBP2.34□□□□□ -2.03
RSM27YGR215W YPL278CQ08990 100 aa2.34□□□□□ -2.03
RSM27YGR215W SGT2Q12118 346 aaKnown RBP2.34□□□□□ -2.03
RSM27YGR215W UTP23Q12339 254 aaKnown RBP2.34□□□□□ -2.03
RSM27YGR215W LAG2Q92325 660 aa2.34□□□□□ -2.03
RSM27YGR215W TDH3P00359 332 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
RSM27YGR215W TRX1P22217 103 aaKnown RBP2.33□□□□□ -2.04
RSM27YGR215W END3P39013 349 aa2.33□□□□□ -2.04
RSM27YGR215W INA22P40576 216 aa2.33□□□□□ -2.04
RSM27YGR215W YNL040WP53960 456 aaPredicted RBP2.33□□□□□ -2.04
RSM27YGR215W CAB5Q03941 241 aa2.33□□□□□ -2.04
RSM27YGR215W YDR114CQ04597 100 aa2.33□□□□□ -2.04
RSM27YGR215W RLP24Q07915 199 aaKnown RBP2.33□□□□□ -2.04
RSM27YGR215W YPR1Q12458 312 aa2.33□□□□□ -2.04
RSM27YGR215W MET2P08465 486 aa2.32□□□□□ -2.04
RSM27YGR215W PRE7P23724 241 aaKnown RBP2.32□□□□□ -2.04
RSM27YGR215W MIG1P27705 504 aa2.32□□□□□ -2.04
RSM27YGR215W CSE1P33307 960 aa2.32□□□□□ -2.04
RSM27YGR215W YHR035WP38769 630 aa2.32□□□□□ -2.04
RSM27YGR215W FET3P38993 636 aa2.32□□□□□ -2.04
RSM27YGR215W YFR045WP43617 309 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 119.8 ms