RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C YOL075CQ08234 1294 aa2.08□□□□□ -2.08
SLX9YGR081C SFG1Q12507 346 aa2.08□□□□□ -2.08
SLX9YGR081C STH1P32597 1359 aa2.08□□□□□ -2.08
SLX9YGR081C TY1B-DR3Q99231 1755 aa2.08□□□□□ -2.08
SLX9YGR081C COX10P21592 462 aa2.07□□□□□ -2.08
SLX9YGR081C CBF5P33322 483 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SLX9YGR081C BDH1P39714 382 aa2.07□□□□□ -2.08
SLX9YGR081C COS4P43542 379 aa2.07□□□□□ -2.08
SLX9YGR081C PRM1P53835 661 aa2.07□□□□□ -2.08
SLX9YGR081C SMP3Q04174 516 aa2.07□□□□□ -2.08
SLX9YGR081C CSM3Q04659 317 aa2.07□□□□□ -2.08
SLX9YGR081C RPN8Q08723 338 aaKnown RBP2.07□□□□□ -2.08
SLX9YGR081C TFB5Q3E7C1 72 aaPredicted RBP2.07□□□□□ -2.08
SLX9YGR081C DAP2P18962 818 aa2.06□□□□□ -2.08
SLX9YGR081C FAA1P30624 700 aaKnown RBP2.06□□□□□ -2.08
SLX9YGR081C SKG6P32900 734 aaPredicted RBP2.06□□□□□ -2.08
SLX9YGR081C MRPS5P33759 307 aa2.06□□□□□ -2.08
SLX9YGR081C PTK1P36002 662 aaPredicted RBP2.06□□□□□ -2.08
SLX9YGR081C IST2P38250 946 aa2.06□□□□□ -2.08
SLX9YGR081C EFM1P38732 585 aa2.06□□□□□ -2.08
SLX9YGR081C RBG1P39729 369 aa2.06□□□□□ -2.08
SLX9YGR081C MPS2P53159 387 aa2.06□□□□□ -2.08
SLX9YGR081C YNR068CP53754 272 aa2.06□□□□□ -2.08
SLX9YGR081C UTP6Q02354 440 aaKnown RBP2.06□□□□□ -2.08
SLX9YGR081C APC4Q04601 652 aa2.06□□□□□ -2.08
SLX9YGR081C ERP4Q12450 207 aa2.06□□□□□ -2.08
SLX9YGR081C RPL6BP05739 176 aaKnown RBP2.05□□□□□ -2.08
SLX9YGR081C CKI1P20485 582 aa2.05□□□□□ -2.08
SLX9YGR081C UBA1P22515 1024 aaKnown RBP2.05□□□□□ -2.08
SLX9YGR081C PEX5P35056 612 aa2.05□□□□□ -2.08
SLX9YGR081C ADH5P38113 351 aaKnown RBP2.05□□□□□ -2.08
SLX9YGR081C GDT1P38301 280 aaPredicted RBP2.05□□□□□ -2.08
SLX9YGR081C YCH1P42937 148 aa2.05□□□□□ -2.08
SLX9YGR081C YFR018CP43599 363 aa2.05□□□□□ -2.08
SLX9YGR081C SMD1Q02260 146 aaPredicted RBP2.05□□□□□ -2.08
SLX9YGR081C RPL6AQ02326 176 aaKnown RBP2.05□□□□□ -2.08
SLX9YGR081C VTI1Q04338 217 aa2.05□□□□□ -2.08
SLX9YGR081C TAF10Q12030 206 aa2.05□□□□□ -2.08
SLX9YGR081C YDL211CQ12121 372 aa2.05□□□□□ -2.08
SLX9YGR081C YOR012WQ12351 137 aa2.05□□□□□ -2.08
SLX9YGR081C URA10P30402 227 aa2.04□□□□□ -2.08
SLX9YGR081C YKL071WP36086 256 aa2.04□□□□□ -2.08
SLX9YGR081C TAE1P38340 232 aa2.04□□□□□ -2.08
SLX9YGR081C RRG9P40156 214 aa2.04□□□□□ -2.08
SLX9YGR081C JEM1P40358 645 aa2.04□□□□□ -2.08
SLX9YGR081C YIL059CP40520 121 aa2.04□□□□□ -2.08
SLX9YGR081C YNL320WP42840 284 aa2.04□□□□□ -2.08
SLX9YGR081C FAR10Q06001 478 aa2.04□□□□□ -2.08
SLX9YGR081C HRT1Q08273 121 aa2.04□□□□□ -2.08
SLX9YGR081C RPN6Q12377 434 aa2.04□□□□□ -2.08
SLX9YGR081C SNF2P22082 1703 aa2.03□□□□□ -2.08
SLX9YGR081C MAS1P10507 462 aa2.03□□□□□ -2.08
SLX9YGR081C THR4P16120 514 aaKnown RBP2.03□□□□□ -2.08
SLX9YGR081C MKK1P32490 508 aa2.03□□□□□ -2.08
SLX9YGR081C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
SLX9YGR081C YMR262WP38430 313 aa2.03□□□□□ -2.08
SLX9YGR081C YHR122WP38829 231 aa2.03□□□□□ -2.08
SLX9YGR081C SHC1P39000 512 aa2.03□□□□□ -2.08
SLX9YGR081C NRM1P53718 249 aa2.03□□□□□ -2.08
SLX9YGR081C GMC1Q04399 608 aa2.03□□□□□ -2.08
SLX9YGR081C NAT4Q04751 285 aa2.03□□□□□ -2.08
SLX9YGR081C DFM1Q12743 341 aaKnown RBP2.03□□□□□ -2.08
SLX9YGR081C VPS63O13549 108 aa2.02□□□□□ -2.09
SLX9YGR081C RAD1P06777 1100 aa2.02□□□□□ -2.09
SLX9YGR081C CUP2P15315 225 aa2.02□□□□□ -2.09
SLX9YGR081C ARF2P19146 181 aaKnown RBP2.02□□□□□ -2.09
SLX9YGR081C UTR1P21373 530 aa2.02□□□□□ -2.09
SLX9YGR081C MXR2P25566 168 aa2.02□□□□□ -2.09
SLX9YGR081C RPB9P27999 122 aa2.02□□□□□ -2.09
SLX9YGR081C ERG9P29704 444 aa2.02□□□□□ -2.09
SLX9YGR081C RXT2P38255 430 aa2.02□□□□□ -2.09
SLX9YGR081C YJL144WP47009 104 aa2.02□□□□□ -2.09
SLX9YGR081C YHC3P47040 408 aa2.02□□□□□ -2.09
SLX9YGR081C UTP15Q04305 513 aaKnown RBP2.02□□□□□ -2.09
SLX9YGR081C ECM19Q06011 112 aa2.02□□□□□ -2.09
SLX9YGR081C DIB1Q06819 143 aaPredicted RBP2.02□□□□□ -2.09
SLX9YGR081C APC5Q08683 685 aa2.02□□□□□ -2.09
SLX9YGR081C SKS1Q12505 502 aa2.02□□□□□ -2.09
SLX9YGR081C FMP27Q06179 2628 aa2.02□□□□□ -2.09
SLX9YGR081C SEN1Q00416 2231 aaKnown RBP2.01□□□□□ -2.09
SLX9YGR081C RPS23AP0CX29 145 aaKnown RBP2.01□□□□□ -2.09
SLX9YGR081C RPS23BP0CX30 145 aa2.01□□□□□ -2.09
SLX9YGR081C RDS1P25611 832 aa2.01□□□□□ -2.09
SLX9YGR081C HMX1P32339 317 aa2.01□□□□□ -2.09
SLX9YGR081C PCH2P38126 564 aa2.01□□□□□ -2.09
SLX9YGR081C TPC1P53257 314 aa2.01□□□□□ -2.09
SLX9YGR081C YMR244WQ04018 355 aa2.01□□□□□ -2.09
SLX9YGR081C YMR310CQ04867 317 aaPredicted RBP2.01□□□□□ -2.09
SLX9YGR081C CPT1P17898 393 aa2□□□□□ -2.09
SLX9YGR081C PEX32P38292 413 aa2□□□□□ -2.09
SLX9YGR081C INP1Q03694 420 aa2□□□□□ -2.09
SLX9YGR081C SPH1Q06160 661 aa2□□□□□ -2.09
SLX9YGR081C SAL1D6W196 494 aa1.99□□□□□ -2.09
SLX9YGR081C ZRT3P34240 503 aa1.99□□□□□ -2.09
SLX9YGR081C DAD2P36162 133 aa1.99□□□□□ -2.09
SLX9YGR081C RPA34P47006 233 aaPredicted RBP1.99□□□□□ -2.09
SLX9YGR081C EOS1P53938 366 aa1.99□□□□□ -2.09
SLX9YGR081C RRB1Q04225 511 aaKnown RBP1.99□□□□□ -2.09
SLX9YGR081C GLE1Q12315 538 aa1.99□□□□□ -2.09
SLX9YGR081C FRE6Q12473 712 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms