RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W MGR1P25573 417 aa4.97□□□□□ -1.61
CDC43YGL155W YCR102CP25608 368 aa4.97□□□□□ -1.61
CDC43YGL155W BUB3P26449 341 aa4.97□□□□□ -1.61
CDC43YGL155W CDC12P32468 407 aaKnown RBP4.97□□□□□ -1.61
CDC43YGL155W SUI1P32911 108 aaKnown RBP4.97□□□□□ -1.61
CDC43YGL155W MSN2P33748 704 aa4.97□□□□□ -1.61
CDC43YGL155W TAF14P35189 244 aa4.97□□□□□ -1.61
CDC43YGL155W MTH1P35198 433 aa4.97□□□□□ -1.61
CDC43YGL155W YKL077WP36081 392 aa4.97□□□□□ -1.61
CDC43YGL155W ALP1P38971 573 aa4.97□□□□□ -1.61
CDC43YGL155W PTI1P39927 425 aaPredicted RBP4.97□□□□□ -1.61
CDC43YGL155W GID8P40208 455 aa4.97□□□□□ -1.61
CDC43YGL155W RFC4P40339 323 aaKnown RBP4.97□□□□□ -1.61
CDC43YGL155W PKP1P40530 394 aa4.97□□□□□ -1.61
CDC43YGL155W BNA6P43619 295 aa4.97□□□□□ -1.61
CDC43YGL155W FAA4P47912 694 aaKnown RBP4.97□□□□□ -1.61
CDC43YGL155W CWC25P53854 179 aaKnown RBP4.97□□□□□ -1.61
CDC43YGL155W TDA7P53882 636 aaPredicted RBP4.97□□□□□ -1.61
CDC43YGL155W RSM28Q03430 361 aa4.97□□□□□ -1.61
CDC43YGL155W YHM2Q04013 314 aa4.97□□□□□ -1.61
CDC43YGL155W MFB1Q04922 465 aa4.97□□□□□ -1.61
CDC43YGL155W YLR224WQ05947 369 aa4.97□□□□□ -1.61
CDC43YGL155W SNT309Q06091 175 aaPredicted RBP4.97□□□□□ -1.61
CDC43YGL155W YDL211CQ12121 372 aa4.97□□□□□ -1.61
CDC43YGL155W YLR111WQ12528 110 aa4.97□□□□□ -1.61
CDC43YGL155W RPS21BQ3E754 87 aaKnown RBP4.97□□□□□ -1.61
CDC43YGL155W COX9P07255 59 aa4.96□□□□□ -1.62
CDC43YGL155W MRP1P10662 321 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W NHP6BP11633 99 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W PDA1P16387 420 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W AAC3P18238 307 aa4.96□□□□□ -1.62
CDC43YGL155W RNA14P25298 677 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W YCR100CP25606 316 aa4.96□□□□□ -1.62
CDC43YGL155W SRB5P32585 307 aa4.96□□□□□ -1.62
CDC43YGL155W PAU2P32612 120 aa4.96□□□□□ -1.62
CDC43YGL155W APL3P38065 1025 aa4.96□□□□□ -1.62
CDC43YGL155W THI2P38141 450 aa4.96□□□□□ -1.62
CDC43YGL155W RTC2P38279 296 aa4.96□□□□□ -1.62
CDC43YGL155W HTD2P38790 280 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W HIS6P40545 261 aa4.96□□□□□ -1.62
CDC43YGL155W RPL10P41805 221 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W BAP3P41815 604 aa4.96□□□□□ -1.62
CDC43YGL155W LEM3P42838 414 aa4.96□□□□□ -1.62
CDC43YGL155W LOH1P47055 219 aa4.96□□□□□ -1.62
CDC43YGL155W UBC12P52491 188 aa4.96□□□□□ -1.62
CDC43YGL155W CDH1P53197 566 aa4.96□□□□□ -1.62
CDC43YGL155W RNH70P53331 553 aa4.96□□□□□ -1.62
CDC43YGL155W CTL1Q03220 320 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W SCS7Q03529 384 aa4.96□□□□□ -1.62
CDC43YGL155W DCR2Q05924 578 aa4.96□□□□□ -1.62
CDC43YGL155W LUC7Q07508 261 aaPredicted RBP4.96□□□□□ -1.62
CDC43YGL155W CRT10Q08226 957 aa4.96□□□□□ -1.62
CDC43YGL155W ATG41Q12048 136 aa4.96□□□□□ -1.62
CDC43YGL155W RTC5Q12108 567 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W YPR022CQ12139 1133 aa4.96□□□□□ -1.62
CDC43YGL155W LEU9Q12166 604 aaKnown RBP4.96□□□□□ -1.62
CDC43YGL155W TIR4Q12218 487 aaPredicted RBP4.96□□□□□ -1.62
CDC43YGL155W YDL177CQ12257 170 aa4.96□□□□□ -1.62
CDC43YGL155W RDI1Q12434 202 aa4.96□□□□□ -1.62
CDC43YGL155W FSH3Q99369 266 aa4.96□□□□□ -1.62
CDC43YGL155W GAL4P04386 881 aa4.95□□□□□ -1.62
CDC43YGL155W CDC9P04819 755 aa4.95□□□□□ -1.62
CDC43YGL155W GCD1P09032 578 aaPredicted RBP4.95□□□□□ -1.62
CDC43YGL155W RED1P14291 827 aa4.95□□□□□ -1.62
CDC43YGL155W MAG1P22134 296 aaKnown RBP4.95□□□□□ -1.62
CDC43YGL155W PRE4P30657 266 aa4.95□□□□□ -1.62
CDC43YGL155W ACB1P31787 87 aa4.95□□□□□ -1.62
CDC43YGL155W MSS1P32559 526 aaPredicted RBP4.95□□□□□ -1.62
CDC43YGL155W VMA8P32610 256 aaKnown RBP4.95□□□□□ -1.62
CDC43YGL155W WBP1P33767 430 aaKnown RBP4.95□□□□□ -1.62
CDC43YGL155W VPS51P36116 164 aa4.95□□□□□ -1.62
CDC43YGL155W EHT1P38295 451 aa4.95□□□□□ -1.62
CDC43YGL155W LEU5P38702 357 aa4.95□□□□□ -1.62
CDC43YGL155W ECM34P38728 170 aa4.95□□□□□ -1.62
CDC43YGL155W HRB1P38922 454 aaKnown RBP RIP-Chip data4.95□□□□□ -1.62not detected
CDC43YGL155W YAL037WP39728 267 aa4.95□□□□□ -1.62
CDC43YGL155W YMR144WP40214 342 aaKnown RBP4.95□□□□□ -1.62
CDC43YGL155W SFH5P47008 294 aa4.95□□□□□ -1.62
CDC43YGL155W YGL235WP53071 178 aa4.95□□□□□ -1.62
CDC43YGL155W POP6P53218 158 aa4.95□□□□□ -1.62
CDC43YGL155W YGR266WP53326 701 aa4.95□□□□□ -1.62
CDC43YGL155W SNO2P53823 222 aa4.95□□□□□ -1.62
CDC43YGL155W GIM3P53900 129 aa4.95□□□□□ -1.62
CDC43YGL155W RHO3Q00245 231 aaKnown RBP4.95□□□□□ -1.62
CDC43YGL155W YPL113CQ02961 396 aa4.95□□□□□ -1.62
CDC43YGL155W DML1Q03652 475 aa4.95□□□□□ -1.62
CDC43YGL155W PEX30Q06169 523 aa4.95□□□□□ -1.62
CDC43YGL155W YPR172WQ06608 200 aa4.95□□□□□ -1.62
CDC43YGL155W PFA4Q12006 378 aa4.95□□□□□ -1.62
CDC43YGL155W BTS1Q12051 335 aa4.95□□□□□ -1.62
CDC43YGL155W PSF1Q12488 208 aa4.95□□□□□ -1.62
CDC43YGL155W PRM4Q12498 284 aa4.95□□□□□ -1.62
CDC43YGL155W DET1Q99288 334 aaKnown RBP4.95□□□□□ -1.62
CDC43YGL155W YBR085C-AO43137 85 aa4.94□□□□□ -1.62
CDC43YGL155W URA3P03962 267 aa4.94□□□□□ -1.62
CDC43YGL155W GAL7P08431 366 aa4.94□□□□□ -1.62
CDC43YGL155W UTR1P21373 530 aa4.94□□□□□ -1.62
CDC43YGL155W AGP1P25376 633 aa4.94□□□□□ -1.62
CDC43YGL155W PUT3P25502 979 aaPredicted RBP4.94□□□□□ -1.62
CDC43YGL155W NAM9P27929 486 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms