RNA–Protein interactions for RNA: YGL061C

DUO1, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene DUO1, Length 744 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DUO1	YGL061C	ERD1	P16151	362 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	CKA2	P19454	339 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	SAR1	P20606	190 aa	Known RBP	3.53	□□□□□ -1.84
DUO1	YGL061C	ZRT1	P32804	376 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	RFT1	P38206	574 aa	Predicted RBP	3.53	□□□□□ -1.84
DUO1	YGL061C	FET3	P38993	636 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	MNN9	P39107	395 aa	Known RBP	3.53	□□□□□ -1.84
DUO1	YGL061C	LOH1	P47055	219 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	RIB4	P50861	169 aa	Predicted RBP	3.53	□□□□□ -1.84
DUO1	YGL061C	VOA1	P53262	265 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	OKP1	P53298	406 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	DBP6	P53734	629 aa	Known RBP	3.53	□□□□□ -1.84
DUO1	YGL061C	YPL080C	Q02826	108 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	INP1	Q03694	420 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	INP2	Q03824	705 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	CUR1	Q06469	252 aa		3.53	□□□□□ -1.84
DUO1	YGL061C	YPL245W	Q12179	454 aa	Known RBP	3.53	□□□□□ -1.84
DUO1	YGL061C	FLO11	P08640	1367 aa		3.52	□□□□□ -1.85
DUO1	YGL061C	FUS3	P16892	353 aa	Known RBP	3.52	□□□□□ -1.85
DUO1	YGL061C	CYM1	P32898	989 aa		3.52	□□□□□ -1.85
DUO1	YGL061C	YFL040W	P43562	540 aa		3.52	□□□□□ -1.85
DUO1	YGL061C	MIC19	P43594	170 aa		3.52	□□□□□ -1.85
DUO1	YGL061C	FMP48	P53233	369 aa		3.52	□□□□□ -1.85
DUO1	YGL061C	CAR2	P07991	424 aa	Known RBP	3.51	□□□□□ -1.85
DUO1	YGL061C	RRG9	P40156	214 aa		3.51	□□□□□ -1.85
DUO1	YGL061C	CDC40	P40968	455 aa	Predicted RBP	3.51	□□□□□ -1.85
DUO1	YGL061C	SNX41	Q04053	625 aa		3.51	□□□□□ -1.85
DUO1	YGL061C	UTP23	Q12339	254 aa	Known RBP	3.51	□□□□□ -1.85
DUO1	YGL061C	DCP1	Q12517	231 aa	Predicted RBP	3.51	□□□□□ -1.85
DUO1	YGL061C	FRM2	P37261	193 aa		3.5	□□□□□ -1.85
DUO1	YGL061C	TRR2	P38816	342 aa		3.5	□□□□□ -1.85
DUO1	YGL061C	SOP4	P39543	234 aa	Predicted RBP	3.5	□□□□□ -1.85
DUO1	YGL061C	FRT2	P39734	528 aa		3.5	□□□□□ -1.85
DUO1	YGL061C	YMR244W	Q04018	355 aa		3.5	□□□□□ -1.85
DUO1	YGL061C	PBP4	Q07362	185 aa	Known RBP	3.5	□□□□□ -1.85
DUO1	YGL061C	MIM1	Q08176	113 aa		3.5	□□□□□ -1.85
DUO1	YGL061C	MRPL20	P22354	195 aa	Predicted RBP	3.49	□□□□□ -1.85
DUO1	YGL061C	RPL5	P26321	297 aa	Known RBP	3.49	□□□□□ -1.85
DUO1	YGL061C	INO2	P26798	304 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	SKG6	P32900	734 aa	Predicted RBP	3.49	□□□□□ -1.85
DUO1	YGL061C	ZRT3	P34240	503 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	PET8	P38921	284 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	DSE1	P40077	573 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	YIL054W	P40524	105 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	LOC1	P43586	204 aa	Predicted RBP	3.49	□□□□□ -1.85
DUO1	YGL061C	COX16	P47081	118 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	YGR266W	P53326	701 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	HST4	P53688	370 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	YNR066C	P53752	436 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	GMC1	Q04399	608 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	RRG8	Q06109	277 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	VAC14	Q06708	880 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	IZH4	Q99393	312 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	BI3	Q9ZZW7	517 aa		3.49	□□□□□ -1.85
DUO1	YGL061C	COX10	P21592	462 aa		3.48	□□□□□ -1.85
DUO1	YGL061C	TPS2	P31688	896 aa	Known RBP	3.48	□□□□□ -1.85
DUO1	YGL061C	BDH1	P39714	382 aa		3.48	□□□□□ -1.85
DUO1	YGL061C	YIR035C	P40579	254 aa		3.48	□□□□□ -1.85
DUO1	YGL061C	ARP5	P53946	755 aa		3.48	□□□□□ -1.85
DUO1	YGL061C	DFM1	Q12743	341 aa	Known RBP	3.48	□□□□□ -1.85
DUO1	YGL061C	RAD7	P06779	565 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	FMT1	P32785	401 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	MCH2	P36032	473 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	SLM1	P40485	686 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	SWC4	P53201	476 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	YMR111C	Q04461	462 aa	Predicted RBP	3.47	□□□□□ -1.85
DUO1	YGL061C	ECM19	Q06011	112 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	DIB1	Q06819	143 aa	Predicted RBP	3.47	□□□□□ -1.85
DUO1	YGL061C	VIK1	Q12045	647 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	YDL211C	Q12121	372 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	SIA1	Q12212	622 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	TRM10	Q12400	293 aa		3.47	□□□□□ -1.85
DUO1	YGL061C	RPL16B	P26785	198 aa	Known RBP	3.46	□□□□□ -1.86
DUO1	YGL061C	RPC25	P35718	212 aa		3.46	□□□□□ -1.86
DUO1	YGL061C	VTI1	Q04338	217 aa		3.46	□□□□□ -1.86
DUO1	YGL061C	APC9	Q12107	265 aa		3.46	□□□□□ -1.86
DUO1	YGL061C	PFK27	Q12471	397 aa	Predicted RBP	3.46	□□□□□ -1.86
DUO1	YGL061C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.45	□□□□□ -1.86	not detected
DUO1	YGL061C	IFM1	P25038	676 aa		3.45	□□□□□ -1.86
DUO1	YGL061C	SWD2	P36104	329 aa	Predicted RBP	3.45	□□□□□ -1.86
DUO1	YGL061C	YMR262W	P38430	313 aa		3.45	□□□□□ -1.86
DUO1	YGL061C	YGL118C	P53132	145 aa		3.45	□□□□□ -1.86
DUO1	YGL061C	BIO4	P53630	237 aa		3.45	□□□□□ -1.86
DUO1	YGL061C	YLR446W	Q06204	433 aa		3.45	□□□□□ -1.86
DUO1	YGL061C	TFC7	Q12415	435 aa		3.45	□□□□□ -1.86
DUO1	YGL061C	LAG2	Q92325	660 aa		3.45	□□□□□ -1.86
DUO1	YGL061C	CPT1	P17898	393 aa		3.44	□□□□□ -1.86
DUO1	YGL061C	MRPL40	P36534	297 aa		3.44	□□□□□ -1.86
DUO1	YGL061C	PFS2	P42841	465 aa	Known RBP	3.44	□□□□□ -1.86
DUO1	YGL061C	CAX4	P53223	239 aa		3.44	□□□□□ -1.86
DUO1	YGL061C	SMD1	Q02260	146 aa	Predicted RBP	3.44	□□□□□ -1.86
DUO1	YGL061C	SPO19	Q03029	223 aa		3.44	□□□□□ -1.86
DUO1	YGL061C	YOR292C	Q08743	309 aa		3.44	□□□□□ -1.86
DUO1	YGL061C	YIL002W-A	Q3E7Z5	69 aa		3.44	□□□□□ -1.86
DUO1	YGL061C	RPL31A	P0C2H8	113 aa	Known RBP	3.43	□□□□□ -1.86
DUO1	YGL061C	CUP2	P15315	225 aa		3.43	□□□□□ -1.86
DUO1	YGL061C	UGA1	P17649	471 aa		3.43	□□□□□ -1.86
DUO1	YGL061C	DAL80	P26343	269 aa		3.43	□□□□□ -1.86
DUO1	YGL061C	RPB9	P27999	122 aa		3.43	□□□□□ -1.86
DUO1	YGL061C	UBC13	P52490	153 aa		3.43	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms