RNA–Protein interactions for RNA: YGL050W

TYW3, Transcript of tRNA methyltransferase required for synthesis of wybutosine, yeast

Gene TYW3, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TYW3	YGL050W	YOR032W-A	Q8TGS1	66 aa		4.23	□□□□□ -1.73
TYW3	YGL050W	YOL087C	Q99247	1116 aa		4.23	□□□□□ -1.73
TYW3	YGL050W	NCP1	P16603	691 aa	Known RBP	4.22	□□□□□ -1.73
TYW3	YGL050W	YAP1	P19880	650 aa	Known RBP	4.22	□□□□□ -1.73
TYW3	YGL050W	RAD51	P25454	400 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	SWH1	P35845	1188 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	YBR139W	P38109	508 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TYW3	YGL050W	SER3	P40054	469 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	GCN20	P43535	752 aa	Known RBP	4.22	□□□□□ -1.73
TYW3	YGL050W	NUP57	P48837	541 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	SEH1	P53011	349 aa	Known RBP	4.22	□□□□□ -1.73
TYW3	YGL050W	RMR1	P53060	241 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	TPS1	Q00764	495 aa	Known RBP	4.22	□□□□□ -1.73
TYW3	YGL050W	YPL068C	Q02749	293 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	ERB1	Q04660	807 aa	Known RBP	4.22	□□□□□ -1.73
TYW3	YGL050W	YPL272C	Q08984	517 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	BSC1	Q12140	328 aa		4.22	□□□□□ -1.73
TYW3	YGL050W	YFR010W-A	P0C5N0	62 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	KSS1	P14681	368 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	YCK1	P23291	538 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	BUD5	P25300	642 aa	Predicted RBP	4.21	□□□□□ -1.74
TYW3	YGL050W	SSE2	P32590	693 aa	Known RBP	4.21	□□□□□ -1.74
TYW3	YGL050W	HCS1	P34243	683 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	RIB1	P38066	345 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	YPT10	P38146	199 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	APD1	P38281	316 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	ECM34	P38728	170 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	APE4	P38821	490 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	RCY1	P39531	840 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	AST2	P39945	430 aa	Known RBP	4.21	□□□□□ -1.74
TYW3	YGL050W	SNM1	P40993	198 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	SMK1	P41808	388 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	EMC2	P47133	292 aa	Known RBP	4.21	□□□□□ -1.74
TYW3	YGL050W	YGL260W	P53056	76 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	HOL1	P53389	586 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	MTQ1	P53944	314 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	NCE101	Q02820	53 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	INP1	Q03694	420 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	CGI121	Q03705	181 aa	Known RBP	4.21	□□□□□ -1.74
TYW3	YGL050W	YDR249C	Q03787	373 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	DCR2	Q05924	578 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	ARV1	Q06541	321 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	SWA2	Q06677	668 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	DTD1	Q07648	150 aa	Known RBP	4.21	□□□□□ -1.74
TYW3	YGL050W	RAX1	Q08760	435 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	YPL191C	Q08930	360 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	MDM32	Q12171	622 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	SFG1	Q12507	346 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	MTR10	Q99189	972 aa		4.21	□□□□□ -1.74
TYW3	YGL050W	IPP1	P00817	287 aa	Known RBP	4.2	□□□□□ -1.74
TYW3	YGL050W	YHR214C-D	P0CX93	97 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	SNF4	P12904	322 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	MDM10	P18409	493 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	ERG8	P24521	451 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	UBC8	P28263	218 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	YIM1	P28625	365 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	SAC1	P32368	623 aa	Known RBP	4.2	□□□□□ -1.74
TYW3	YGL050W	APE2	P32454	952 aa	Known RBP	4.2	□□□□□ -1.74
TYW3	YGL050W	RPN2	P32565	945 aa	Known RBP	4.2	□□□□□ -1.74
TYW3	YGL050W	ARC19	P33204	171 aa	Known RBP	4.2	□□□□□ -1.74
TYW3	YGL050W	TPO5	P36029	618 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	SNU114	P36048	1008 aa	Known RBP	4.2	□□□□□ -1.74
TYW3	YGL050W	RPS20	P38701	121 aa	Known RBP	4.2	□□□□□ -1.74
TYW3	YGL050W	NSG1	P38837	291 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	SWD1	P39706	426 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	IDS2	P46958	469 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	TAX4	P47030	604 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	MDE1	P47095	244 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	IGO1	P53897	168 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	PFA5	Q03289	374 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	MIX14	Q04341	121 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	BUR2	Q05949	395 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	SEI1	Q06058	285 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	YOR342C	Q12182	319 aa		4.2	□□□□□ -1.74
TYW3	YGL050W	YOL163W	P0CF20	169 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	YAK1	P14680	807 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	ERD1	P16151	362 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	ERD2	P18414	219 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	FAR1	P21268	830 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	RRP7	P25368	297 aa	Predicted RBP	4.19	□□□□□ -1.74
TYW3	YGL050W	ITR2	P30606	609 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	SNC1	P31109	117 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	MDL1	P33310	695 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	SLC1	P33333	303 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	SEF1	P34228	1148 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	OM14	P38325	134 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	YHR180W	P38868	163 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TYW3	YGL050W	MPM1	P40364	252 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	PKP1	P40530	394 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	SNL1	P40548	159 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	ECO1	P43605	281 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	SHE4	P51534	789 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	MPC1	P53157	130 aa	Known RBP	4.19	□□□□□ -1.74
TYW3	YGL050W	RHO5	P53879	331 aa	Known RBP	4.19	□□□□□ -1.74
TYW3	YGL050W	YDR209C	Q03480	137 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	RSN1	Q03516	953 aa		4.19	□□□□□ -1.74
TYW3	YGL050W	PAL1	Q05518	499 aa	Known RBP	4.19	□□□□□ -1.74
TYW3	YGL050W	LOT6	Q07923	191 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms