RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W RCY1P39531 840 aa5.54□□□□□ -1.52
RPN11YFR004W YKE4P40544 346 aa5.54□□□□□ -1.52
RPN11YFR004W SNM1P40993 198 aa5.54□□□□□ -1.52
RPN11YFR004W ARO8P53090 500 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W HOS2P53096 452 aaPredicted RBP5.54□□□□□ -1.52
RPN11YFR004W COS1P53822 381 aa5.54□□□□□ -1.52
RPN11YFR004W YNL092WP53934 400 aa5.54□□□□□ -1.52
RPN11YFR004W YSA1Q01976 231 aa5.54□□□□□ -1.52
RPN11YFR004W PFA5Q03289 374 aa5.54□□□□□ -1.52
RPN11YFR004W LRS4Q04087 347 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W RQC1Q05468 723 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W YPR196WQ06595 470 aa5.54□□□□□ -1.52
RPN11YFR004W SKI7Q08491 747 aaPredicted RBP5.54□□□□□ -1.52
RPN11YFR004W IRC13Q08630 104 aa5.54□□□□□ -1.52
RPN11YFR004W RRG7Q08774 242 aaPredicted RBP5.54□□□□□ -1.52
RPN11YFR004W BSC1Q12140 328 aa5.54□□□□□ -1.52
RPN11YFR004W RPL7BQ12213 244 aaKnown RBP5.54□□□□□ -1.52
RPN11YFR004W SCM3Q12334 223 aa5.54□□□□□ -1.52
RPN11YFR004W SUS1Q6WNK7 96 aa5.54□□□□□ -1.52
RPN11YFR004W YBR182C-AQ8TGU6 64 aa5.54□□□□□ -1.52
RPN11YFR004W YEL009C-AA0A023PZF2 135 aa5.53□□□□□ -1.52
RPN11YFR004W PDE2P06776 526 aa5.53□□□□□ -1.52
RPN11YFR004W TAH1P25638 111 aaPredicted RBP5.53□□□□□ -1.52
RPN11YFR004W BUB3P26449 341 aa5.53□□□□□ -1.52
RPN11YFR004W ADE1P27616 306 aa5.53□□□□□ -1.52
RPN11YFR004W RNP1P32385 249 aa5.53□□□□□ -1.52
RPN11YFR004W ERG1P32476 496 aaKnown RBP5.53□□□□□ -1.52
RPN11YFR004W YPT7P32939 208 aa5.53□□□□□ -1.52
RPN11YFR004W SFC1P33303 322 aa5.53□□□□□ -1.52
RPN11YFR004W LST4P34239 828 aa5.53□□□□□ -1.52
RPN11YFR004W RSM22P36056 628 aa5.53□□□□□ -1.52
RPN11YFR004W SRO77P38163 1010 aa5.53□□□□□ -1.52
RPN11YFR004W SHE1P38200 338 aa5.53□□□□□ -1.52
RPN11YFR004W FAT1P38225 669 aa5.53□□□□□ -1.52
RPN11YFR004W BUR6P40096 142 aa5.53□□□□□ -1.52
RPN11YFR004W YJL068CP40363 299 aa5.53□□□□□ -1.52
RPN11YFR004W PAM16P42949 149 aa5.53□□□□□ -1.52
RPN11YFR004W TRM9P49957 279 aa5.53□□□□□ -1.52
RPN11YFR004W ELP6Q04868 273 aa5.53□□□□□ -1.52
RPN11YFR004W BOP2Q06150 570 aa5.53□□□□□ -1.52
RPN11YFR004W YLR173WQ06247 608 aa5.53□□□□□ -1.52
RPN11YFR004W YPR022CQ12139 1133 aa5.53□□□□□ -1.52
RPN11YFR004W YPT1P01123 206 aaKnown RBP5.52□□□□□ -1.53
RPN11YFR004W SAR1P20606 190 aaKnown RBP5.52□□□□□ -1.53
RPN11YFR004W CPR3P25719 182 aa5.52□□□□□ -1.53
RPN11YFR004W YJU2P28320 278 aaPredicted RBP5.52□□□□□ -1.53
RPN11YFR004W ASF2P32448 525 aaPredicted RBP5.52□□□□□ -1.53
RPN11YFR004W RPS20P38701 121 aaKnown RBP5.52□□□□□ -1.53
RPN11YFR004W SER3P40054 469 aa5.52□□□□□ -1.53
RPN11YFR004W SEC24P40482 926 aaKnown RBP5.52□□□□□ -1.53
RPN11YFR004W MNT3P40549 630 aa5.52□□□□□ -1.53
RPN11YFR004W ATG18P43601 500 aa5.52□□□□□ -1.53
RPN11YFR004W CHA4P43634 648 aa5.52□□□□□ -1.53
RPN11YFR004W YAE1P47118 141 aaPredicted RBP5.52□□□□□ -1.53
RPN11YFR004W NUP57P48837 541 aa5.52□□□□□ -1.53
RPN11YFR004W TOS2P50078 622 aa5.52□□□□□ -1.53
RPN11YFR004W FHN1P53279 174 aa5.52□□□□□ -1.53
RPN11YFR004W CTL1Q03220 320 aaKnown RBP5.52□□□□□ -1.53
RPN11YFR004W YMR310CQ04867 317 aaPredicted RBP5.52□□□□□ -1.53
RPN11YFR004W MDM30Q05930 598 aa5.52□□□□□ -1.53
RPN11YFR004W YLR040CQ07988 224 aa5.52□□□□□ -1.53
RPN11YFR004W YPR1Q12458 312 aa5.52□□□□□ -1.53
RPN11YFR004W YDL007C-AQ2V2Q0 85 aa5.52□□□□□ -1.53
RPN11YFR004W COX1P00401 534 aa5.51□□□□□ -1.53
RPN11YFR004W SIR2P06700 562 aa5.51□□□□□ -1.53
RPN11YFR004W ATG22P25568 528 aa5.51□□□□□ -1.53
RPN11YFR004W ERG9P29704 444 aa5.51□□□□□ -1.53
RPN11YFR004W PPQ1P32945 549 aa5.51□□□□□ -1.53
RPN11YFR004W TEF4P36008 412 aaKnown RBP5.51□□□□□ -1.53
RPN11YFR004W KAE1P36132 386 aa5.51□□□□□ -1.53
RPN11YFR004W MBA1P38300 278 aa5.51□□□□□ -1.53
RPN11YFR004W ECM34P38728 170 aa5.51□□□□□ -1.53
RPN11YFR004W RPL10P41805 221 aaKnown RBP5.51□□□□□ -1.53
RPN11YFR004W IRC18P47056 224 aa5.51□□□□□ -1.53
RPN11YFR004W EXG2P52911 562 aa5.51□□□□□ -1.53
RPN11YFR004W RBG2P53295 368 aaKnown RBP5.51□□□□□ -1.53
RPN11YFR004W RRN9P53437 365 aa5.51□□□□□ -1.53
RPN11YFR004W TIM11P81449 96 aaPredicted RBP5.51□□□□□ -1.53
RPN11YFR004W YPL068CQ02749 293 aa5.51□□□□□ -1.53
RPN11YFR004W NGL2Q03264 515 aaKnown RBP5.51□□□□□ -1.53
RPN11YFR004W OST6Q03723 332 aa5.51□□□□□ -1.53
RPN11YFR004W NAT4Q04751 285 aa5.51□□□□□ -1.53
RPN11YFR004W RAX1Q08760 435 aa5.51□□□□□ -1.53
RPN11YFR004W YPL199CQ08954 240 aa5.51□□□□□ -1.53
RPN11YFR004W SPC3Q12133 184 aa5.51□□□□□ -1.53
RPN11YFR004W BBP1Q12365 385 aa5.51□□□□□ -1.53
RPN11YFR004W KIN28P06242 306 aa5.5□□□□□ -1.53
RPN11YFR004W YOL162WP0CF19 215 aa5.5□□□□□ -1.53
RPN11YFR004W YOL163WP0CF20 169 aa5.5□□□□□ -1.53
RPN11YFR004W CDC26P14724 124 aa5.5□□□□□ -1.53
RPN11YFR004W SFA1P32771 386 aa5.5□□□□□ -1.53
RPN11YFR004W AUR1P36107 401 aaPredicted RBP5.5□□□□□ -1.53
RPN11YFR004W YBR063CP38083 404 aa5.5□□□□□ -1.53
RPN11YFR004W ALG14P38242 237 aa5.5□□□□□ -1.53
RPN11YFR004W PZF1P39933 429 aa5.5□□□□□ -1.53
RPN11YFR004W GID8P40208 455 aa5.5□□□□□ -1.53
RPN11YFR004W GDS1P41913 522 aa5.5□□□□□ -1.53
RPN11YFR004W PFS2P42841 465 aaKnown RBP5.5□□□□□ -1.53
RPN11YFR004W BAT2P47176 376 aaKnown RBP5.5□□□□□ -1.53
RPN11YFR004W SPT20P50875 604 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms