RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W MKC7P53379 596 aa1.4□□□□□ -2.18
SXM1YDR395W YTP1P53584 459 aa1.4□□□□□ -2.18
SXM1YDR395W ALG11P53954 548 aaKnown RBP1.4□□□□□ -2.18
SXM1YDR395W TMA20P89886 181 aaPredicted RBP1.4□□□□□ -2.18
SXM1YDR395W SLD5Q03406 294 aa1.4□□□□□ -2.18
SXM1YDR395W SNX41Q04053 625 aa1.4□□□□□ -2.18
SXM1YDR395W NAT4Q04751 285 aa1.4□□□□□ -2.18
SXM1YDR395W CDD1Q06549 142 aa1.4□□□□□ -2.18
SXM1YDR395W YPR196WQ06595 470 aa1.4□□□□□ -2.18
SXM1YDR395W MFG1Q07684 458 aa1.4□□□□□ -2.18
SXM1YDR395W YLR031WQ07978 186 aa1.4□□□□□ -2.18
SXM1YDR395W YOL159CQ08300 171 aa1.4□□□□□ -2.18
SXM1YDR395W PUS7Q08647 676 aaKnown RBP1.4□□□□□ -2.18
SXM1YDR395W BTS1Q12051 335 aa1.4□□□□□ -2.18
SXM1YDR395W OSW2Q12202 724 aa1.4□□□□□ -2.18
SXM1YDR395W RKM5Q12367 367 aa1.4□□□□□ -2.18
SXM1YDR395W TAD3Q9URQ3 322 aa1.4□□□□□ -2.18
SXM1YDR395W STT4P37297 1900 aa1.4□□□□□ -2.18
SXM1YDR395W HEM2P05373 342 aa1.4□□□□□ -2.19
SXM1YDR395W HAP2P06774 265 aa1.4□□□□□ -2.19
SXM1YDR395W PEP4P07267 405 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W COS2P0CX12 379 aa1.4□□□□□ -2.19
SXM1YDR395W COS3P0CX13 379 aa1.4□□□□□ -2.19
SXM1YDR395W ASP3-2P0CX77 362 aa1.4□□□□□ -2.19
SXM1YDR395W ASP3-3P0CX78 362 aa1.4□□□□□ -2.19
SXM1YDR395W ASP3-4P0CX79 362 aa1.4□□□□□ -2.19
SXM1YDR395W ASP3-1P0CZ17 362 aa1.4□□□□□ -2.19
SXM1YDR395W NMT1P14743 455 aa1.4□□□□□ -2.19
SXM1YDR395W YMR31P19955 123 aa1.4□□□□□ -2.19
SXM1YDR395W PDE1P22434 369 aa1.4□□□□□ -2.19
SXM1YDR395W TKL1P23254 680 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W CNE1P27825 502 aa1.4□□□□□ -2.19
SXM1YDR395W EHD3P28817 500 aa1.4□□□□□ -2.19
SXM1YDR395W DEG1P31115 442 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W ECM25P32525 599 aa1.4□□□□□ -2.19
SXM1YDR395W DSS4P32601 143 aa1.4□□□□□ -2.19
SXM1YDR395W NRP1P32770 719 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SXM1YDR395W CAT2P32796 670 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W CPR5P35176 225 aa1.4□□□□□ -2.19
SXM1YDR395W YKL075CP36083 450 aa1.4□□□□□ -2.19
SXM1YDR395W RTC2P38279 296 aa1.4□□□□□ -2.19
SXM1YDR395W MIC12P38341 106 aa1.4□□□□□ -2.19
SXM1YDR395W TSC10P38342 320 aa1.4□□□□□ -2.19
SXM1YDR395W PTC7P38797 343 aa1.4□□□□□ -2.19
SXM1YDR395W SPC97P38863 823 aa1.4□□□□□ -2.19
SXM1YDR395W MBB1P39534 108 aa1.4□□□□□ -2.19
SXM1YDR395W YNL194CP40169 301 aa1.4□□□□□ -2.19
SXM1YDR395W BTT1P40314 149 aaPredicted RBP1.4□□□□□ -2.19
SXM1YDR395W YIL108WP40483 696 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W RTS2P40962 232 aa1.4□□□□□ -2.19
SXM1YDR395W PHO86P46956 311 aa1.4□□□□□ -2.19
SXM1YDR395W JHD2P47156 728 aaPredicted RBP1.4□□□□□ -2.19
SXM1YDR395W MTR3P48240 250 aaPredicted RBP1.4□□□□□ -2.19
SXM1YDR395W PMT5P52867 743 aa1.4□□□□□ -2.19
SXM1YDR395W NSA1P53136 463 aaPredicted RBP1.4□□□□□ -2.19
SXM1YDR395W NMA2P53204 395 aa1.4□□□□□ -2.19
SXM1YDR395W YDR132CQ03900 495 aa1.4□□□□□ -2.19
SXM1YDR395W RVB1Q03940 463 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W DOT1Q04089 582 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W YMR310CQ04867 317 aaPredicted RBP1.4□□□□□ -2.19
SXM1YDR395W ORM2Q06144 216 aa1.4□□□□□ -2.19
SXM1YDR395W RIF2Q06208 395 aa1.4□□□□□ -2.19
SXM1YDR395W NOC4Q06512 552 aaPredicted RBP1.4□□□□□ -2.19
SXM1YDR395W SSK1Q07084 712 aa1.4□□□□□ -2.19
SXM1YDR395W MRX9Q07349 420 aaKnown RBP1.4□□□□□ -2.19
SXM1YDR395W YET3Q07451 203 aa1.4□□□□□ -2.19
SXM1YDR395W YOL019WQ08157 551 aa1.4□□□□□ -2.19
SXM1YDR395W YNG1Q08465 219 aa1.4□□□□□ -2.19
SXM1YDR395W AIM41Q12032 185 aa1.4□□□□□ -2.19
SXM1YDR395W SIA1Q12212 622 aa1.4□□□□□ -2.19
SXM1YDR395W TRM13Q12383 476 aa1.4□□□□□ -2.19
SXM1YDR395W HMS1Q12398 434 aa1.4□□□□□ -2.19
SXM1YDR395W SNF8Q12483 233 aa1.4□□□□□ -2.19
SXM1YDR395W YLR415CO13578 112 aa1.39□□□□□ -2.19
SXM1YDR395W RHO2P06781 192 aa1.39□□□□□ -2.19
SXM1YDR395W TRP4P07285 380 aaPredicted RBP1.39□□□□□ -2.19
SXM1YDR395W RPS4AP0CX35 261 aaKnown RBP1.39□□□□□ -2.19
SXM1YDR395W RPS4BP0CX36 261 aaKnown RBP1.39□□□□□ -2.19
SXM1YDR395W ERG11P10614 530 aa1.39□□□□□ -2.19
SXM1YDR395W ATP10P18496 279 aa1.39□□□□□ -2.19
SXM1YDR395W RNR3P21672 869 aaKnown RBP1.39□□□□□ -2.19
SXM1YDR395W YCR102CP25608 368 aa1.39□□□□□ -2.19
SXM1YDR395W TRR1P29509 319 aaKnown RBP1.39□□□□□ -2.19
SXM1YDR395W ERG9P29704 444 aa1.39□□□□□ -2.19
SXM1YDR395W MDH3P32419 343 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SXM1YDR395W CDC5P32562 705 aa1.39□□□□□ -2.19
SXM1YDR395W YPT10P38146 199 aa1.39□□□□□ -2.19
SXM1YDR395W RRN10P38204 145 aa1.39□□□□□ -2.19
SXM1YDR395W FZO1P38297 855 aa1.39□□□□□ -2.19
SXM1YDR395W VHC1P38329 1120 aa1.39□□□□□ -2.19
SXM1YDR395W YHL012WP38709 493 aa1.39□□□□□ -2.19
SXM1YDR395W INM1P38710 295 aa1.39□□□□□ -2.19
SXM1YDR395W OXA1P39952 402 aa1.39□□□□□ -2.19
SXM1YDR395W TRS85P46944 698 aa1.39□□□□□ -2.19
SXM1YDR395W SFH5P47008 294 aa1.39□□□□□ -2.19
SXM1YDR395W RTT101P47050 842 aa1.39□□□□□ -2.19
SXM1YDR395W YJR011CP47086 261 aaPredicted RBP1.39□□□□□ -2.19
SXM1YDR395W TOS2P50078 622 aa1.39□□□□□ -2.19
SXM1YDR395W NBP35P52920 328 aa1.39□□□□□ -2.19
SXM1YDR395W YGR079WP53249 370 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms