RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C RSC1P53236 928 aa1.72□□□□□ -2.13
SNU56YDR240C RGM1Q00453 211 aa1.72□□□□□ -2.13
SNU56YDR240C YPL080CQ02826 108 aa1.72□□□□□ -2.13
SNU56YDR240C IES3Q12345 250 aa1.72□□□□□ -2.13
SNU56YDR240C REP1P03871 373 aa1.71□□□□□ -2.14
SNU56YDR240C JEM1P40358 645 aa1.71□□□□□ -2.14
SNU56YDR240C YNL040WP53960 456 aaPredicted RBP1.71□□□□□ -2.14
SNU56YDR240C ACT1P60010 375 aaKnown RBP1.71□□□□□ -2.14
SNU56YDR240C CDD1Q06549 142 aa1.71□□□□□ -2.14
SNU56YDR240C YPL245WQ12179 454 aaKnown RBP1.71□□□□□ -2.14
SNU56YDR240C ERP3Q12403 225 aa1.71□□□□□ -2.14
SNU56YDR240C MRX4Q12467 430 aa1.71□□□□□ -2.14
SNU56YDR240C KRE1P17260 313 aa1.7□□□□□ -2.14
SNU56YDR240C VPH2P32341 215 aa1.7□□□□□ -2.14
SNU56YDR240C FEX1Q08913 375 aa1.7□□□□□ -2.14
SNU56YDR240C FEX2Q08991 375 aa1.7□□□□□ -2.14
SNU56YDR240C NBL1Q3E7Y6 73 aa1.7□□□□□ -2.14
SNU56YDR240C RGS2Q99188 309 aa1.7□□□□□ -2.14
SNU56YDR240C SNF6P18888 332 aa1.69□□□□□ -2.14
SNU56YDR240C RBK1P25332 333 aa1.69□□□□□ -2.14
SNU56YDR240C IML3P38265 245 aa1.69□□□□□ -2.14
SNU56YDR240C EDC2P40023 145 aaPredicted RBP1.69□□□□□ -2.14
SNU56YDR240C EOS1P53938 366 aa1.69□□□□□ -2.14
SNU56YDR240C MIM1Q08176 113 aa1.69□□□□□ -2.14
SNU56YDR240C RDL2Q08742 149 aaKnown RBP1.69□□□□□ -2.14
SNU56YDR240C YOL163WP0CF20 169 aa1.69□□□□□ -2.14
SNU56YDR240C MRPL20P22354 195 aaPredicted RBP1.69□□□□□ -2.14
SNU56YDR240C MNN5P46982 586 aa1.69□□□□□ -2.14
SNU56YDR240C YNL095CP53932 642 aa1.69□□□□□ -2.14
SNU56YDR240C YOR012WQ12351 137 aa1.69□□□□□ -2.14
SNU56YDR240C CBP2P03874 630 aaPredicted RBP1.68□□□□□ -2.14
SNU56YDR240C YLL053CP0CD98 152 aa1.68□□□□□ -2.14
SNU56YDR240C CIN8P27895 1000 aa1.68□□□□□ -2.14
SNU56YDR240C YPS1P32329 569 aa1.68□□□□□ -2.14
SNU56YDR240C FYV8P46949 817 aaKnown RBP1.68□□□□□ -2.14
SNU56YDR240C UFD1P53044 361 aa1.68□□□□□ -2.14
SNU56YDR240C YLR012CQ07927 99 aa1.68□□□□□ -2.14
SNU56YDR240C HXT2P23585 541 aa1.67□□□□□ -2.14
SNU56YDR240C MEI5P32489 222 aa1.67□□□□□ -2.14
SNU56YDR240C MYO3P36006 1272 aa1.67□□□□□ -2.14
SNU56YDR240C YHL044WP38727 235 aa1.67□□□□□ -2.14
SNU56YDR240C PES4P39684 611 aa1.67□□□□□ -2.14
SNU56YDR240C PCL7P40186 285 aa1.67□□□□□ -2.14
SNU56YDR240C BTT1P40314 149 aaPredicted RBP1.67□□□□□ -2.14
SNU56YDR240C YNR066CP53752 436 aa1.67□□□□□ -2.14
SNU56YDR240C VIK1Q12045 647 aa1.67□□□□□ -2.14
SNU56YDR240C ACB1P31787 87 aa1.66□□□□□ -2.14
SNU56YDR240C AIM29P36154 155 aa1.66□□□□□ -2.14
SNU56YDR240C ADH5P38113 351 aaKnown RBP1.66□□□□□ -2.14
SNU56YDR240C YBL081WP38180 368 aaKnown RBP1.66□□□□□ -2.14
SNU56YDR240C YER084WP40057 128 aa1.66□□□□□ -2.14
SNU56YDR240C YIL089WP40500 205 aa1.66□□□□□ -2.14
SNU56YDR240C TAF6P53040 516 aa1.66□□□□□ -2.14
SNU56YDR240C YNL143CP53908 130 aa1.66□□□□□ -2.14
SNU56YDR240C YAK1P14680 807 aa1.65□□□□□ -2.15
SNU56YDR240C SAG1P20840 650 aa1.65□□□□□ -2.15
SNU56YDR240C RXT2P38255 430 aa1.65□□□□□ -2.15
SNU56YDR240C PXR1P53335 271 aaPredicted RBP1.65□□□□□ -2.15
SNU56YDR240C PRE7P23724 241 aaKnown RBP1.64□□□□□ -2.15
SNU56YDR240C SUR1P33300 382 aa1.64□□□□□ -2.15
SNU56YDR240C CAB3P36076 571 aa1.64□□□□□ -2.15
SNU56YDR240C ALP1P38971 573 aa1.64□□□□□ -2.15
SNU56YDR240C PRP39P39682 629 aaKnown RBP1.64□□□□□ -2.15
SNU56YDR240C LIF1P53150 421 aa1.64□□□□□ -2.15
SNU56YDR240C YGR016WP53209 190 aa1.64□□□□□ -2.15
SNU56YDR240C SYF2P53277 215 aaPredicted RBP1.64□□□□□ -2.15
SNU56YDR240C UBX2Q04228 584 aa1.64□□□□□ -2.15
SNU56YDR240C ERP4Q12450 207 aa1.64□□□□□ -2.15
SNU56YDR240C STE3P06783 470 aa1.63□□□□□ -2.15
SNU56YDR240C SPS100P13130 326 aa1.63□□□□□ -2.15
SNU56YDR240C CDC42P19073 191 aa1.63□□□□□ -2.15
SNU56YDR240C RVB1Q03940 463 aaKnown RBP1.63□□□□□ -2.15
SNU56YDR240C SEC13Q04491 297 aaKnown RBP1.63□□□□□ -2.15
SNU56YDR240C YOR283WQ12040 230 aaKnown RBP1.63□□□□□ -2.15
SNU56YDR240C PFK27Q12471 397 aaPredicted RBP1.63□□□□□ -2.15
SNU56YDR240C VPS1P21576 704 aaKnown RBP1.63□□□□□ -2.15
SNU56YDR240C VMA5P31412 392 aaKnown RBP1.63□□□□□ -2.15
SNU56YDR240C PET8P38921 284 aa1.63□□□□□ -2.15
SNU56YDR240C YNL146WP53906 100 aa1.63□□□□□ -2.15
SNU56YDR240C ARC18Q05933 178 aaKnown RBP1.63□□□□□ -2.15
SNU56YDR240C DBP9Q06218 594 aaKnown RBP1.63□□□□□ -2.15
SNU56YDR240C GCG1P32656 232 aaKnown RBP1.62□□□□□ -2.15
SNU56YDR240C MRPL6P32904 214 aa1.62□□□□□ -2.15
SNU56YDR240C MED6P38782 295 aa1.62□□□□□ -2.15
SNU56YDR240C NBP1P52919 319 aaPredicted RBP1.62□□□□□ -2.15
SNU56YDR240C RSM27P53305 110 aa1.62□□□□□ -2.15
SNU56YDR240C AQR1P53943 586 aa1.62□□□□□ -2.15
SNU56YDR240C YOR292CQ08743 309 aa1.62□□□□□ -2.15
SNU56YDR240C TIM22Q12328 207 aa1.62□□□□□ -2.15
SNU56YDR240C YDR262WQ12331 272 aa1.62□□□□□ -2.15
SNU56YDR240C FRE6Q12473 712 aa1.62□□□□□ -2.15
SNU56YDR240C SPO24Q3E752 67 aa1.62□□□□□ -2.15
SNU56YDR240C IFM1P25038 676 aa1.61□□□□□ -2.15
SNU56YDR240C CLB6P32943 380 aa1.61□□□□□ -2.15
SNU56YDR240C SOP4P39543 234 aaPredicted RBP1.61□□□□□ -2.15
SNU56YDR240C YGL114WP53134 725 aa1.61□□□□□ -2.15
SNU56YDR240C ZWF1P11412 505 aaKnown RBP1.6□□□□□ -2.15
SNU56YDR240C ERD1P16151 362 aa1.6□□□□□ -2.15
SNU56YDR240C YFL064CP43540 174 aa1.6□□□□□ -2.15
SNU56YDR240C OSH6Q02201 448 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms