RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C INP2Q03824 705 aa1.33□□□□□ -2.2
SWI5YDR146C YMR244WQ04018 355 aa1.33□□□□□ -2.2
SWI5YDR146C GMC1Q04399 608 aa1.33□□□□□ -2.2
SWI5YDR146C BUR2Q05949 395 aa1.33□□□□□ -2.2
SWI5YDR146C PAA1Q12447 191 aaKnown RBP1.33□□□□□ -2.2
SWI5YDR146C MHP1P43638 1398 aa1.32□□□□□ -2.2
SWI5YDR146C TRX1P22217 103 aaKnown RBP1.32□□□□□ -2.2
SWI5YDR146C ZRT3P34240 503 aa1.32□□□□□ -2.2
SWI5YDR146C KTI12P34253 313 aaKnown RBP1.32□□□□□ -2.2
SWI5YDR146C RFT1P38206 574 aaPredicted RBP1.32□□□□□ -2.2
SWI5YDR146C SWC5P38326 303 aa1.32□□□□□ -2.2
SWI5YDR146C SPO73P40031 143 aa1.32□□□□□ -2.2
SWI5YDR146C UTP25P40498 721 aaKnown RBP1.32□□□□□ -2.2
SWI5YDR146C RIB4P50861 169 aaPredicted RBP1.32□□□□□ -2.2
SWI5YDR146C YGR168CP53293 376 aa1.32□□□□□ -2.2
SWI5YDR146C HCH1P53834 153 aa1.32□□□□□ -2.2
SWI5YDR146C VTI1Q04338 217 aa1.32□□□□□ -2.2
SWI5YDR146C TRM10Q12400 293 aa1.32□□□□□ -2.2
SWI5YDR146C PRM7Q12459 698 aa1.32□□□□□ -2.2
SWI5YDR146C FLO11P08640 1367 aa1.32□□□□□ -2.2
SWI5YDR146C CBP2P03874 630 aaPredicted RBP1.31□□□□□ -2.2
SWI5YDR146C MEI5P32489 222 aa1.31□□□□□ -2.2
SWI5YDR146C MCH2P36032 473 aa1.31□□□□□ -2.2
SWI5YDR146C MIC19P43594 170 aa1.31□□□□□ -2.2
SWI5YDR146C DBP6P53734 629 aaKnown RBP1.31□□□□□ -2.2
SWI5YDR146C YNR066CP53752 436 aa1.31□□□□□ -2.2
SWI5YDR146C ABZ2Q03266 374 aa1.31□□□□□ -2.2
SWI5YDR146C INP1Q03694 420 aa1.31□□□□□ -2.2
SWI5YDR146C CAB5Q03941 241 aa1.31□□□□□ -2.2
SWI5YDR146C MRX8Q05473 314 aa1.31□□□□□ -2.2
SWI5YDR146C CUR1Q06469 252 aa1.31□□□□□ -2.2
SWI5YDR146C DTD1Q07648 150 aaKnown RBP1.31□□□□□ -2.2
SWI5YDR146C RTC5Q12108 567 aaKnown RBP1.31□□□□□ -2.2
SWI5YDR146C YDL211CQ12121 372 aa1.31□□□□□ -2.2
SWI5YDR146C CUP2P15315 225 aa1.31□□□□□ -2.2
SWI5YDR146C ZIP1P31111 875 aa1.31□□□□□ -2.2
SWI5YDR146C VPH2P32341 215 aa1.31□□□□□ -2.2
SWI5YDR146C FMT1P32785 401 aa1.31□□□□□ -2.2
SWI5YDR146C GPX1P36014 167 aa1.31□□□□□ -2.2
SWI5YDR146C YMR262WP38430 313 aa1.31□□□□□ -2.2
SWI5YDR146C YHR035WP38769 630 aa1.31□□□□□ -2.2
SWI5YDR146C CTM1P38818 585 aa1.31□□□□□ -2.2
SWI5YDR146C PES4P39684 611 aa1.31□□□□□ -2.2
SWI5YDR146C OSW5P40219 148 aa1.31□□□□□ -2.2
SWI5YDR146C SLM1P40485 686 aa1.31□□□□□ -2.2
SWI5YDR146C FMP48P53233 369 aa1.31□□□□□ -2.2
SWI5YDR146C BIO4P53630 237 aa1.31□□□□□ -2.2
SWI5YDR146C YPL080CQ02826 108 aa1.31□□□□□ -2.2
SWI5YDR146C IRC4Q03036 179 aa1.31□□□□□ -2.2
SWI5YDR146C UTP15Q04305 513 aaKnown RBP1.31□□□□□ -2.2
SWI5YDR146C YPL245WQ12179 454 aaKnown RBP1.31□□□□□ -2.2
SWI5YDR146C RFM1Q12192 310 aa1.31□□□□□ -2.2
SWI5YDR146C BI3Q9ZZW7 517 aa1.31□□□□□ -2.2
SWI5YDR146C ITR2P30606 609 aa1.3□□□□□ -2.2
SWI5YDR146C SKG6P32900 734 aaPredicted RBP1.3□□□□□ -2.2
SWI5YDR146C FET3P38993 636 aa1.3□□□□□ -2.2
SWI5YDR146C YDR222WQ04925 415 aa1.3□□□□□ -2.2
SWI5YDR146C YLR297WQ05899 129 aa1.3□□□□□ -2.2
SWI5YDR146C APC2Q12440 853 aa1.3□□□□□ -2.2
SWI5YDR146C GCD2P12754 651 aaPredicted RBP1.3□□□□□ -2.2
SWI5YDR146C CPT1P17898 393 aa1.3□□□□□ -2.2
SWI5YDR146C MRPL20P22354 195 aaPredicted RBP1.3□□□□□ -2.2
SWI5YDR146C YBR062CP38239 180 aa1.3□□□□□ -2.2
SWI5YDR146C UBC13P52490 153 aa1.3□□□□□ -2.2
SWI5YDR146C SNX41Q04053 625 aa1.3□□□□□ -2.2
SWI5YDR146C SEC13Q04491 297 aaKnown RBP1.3□□□□□ -2.2
SWI5YDR146C GTO3Q04806 366 aa1.3□□□□□ -2.2
SWI5YDR146C RRG8Q06109 277 aa1.3□□□□□ -2.2
SWI5YDR146C YLR446WQ06204 433 aa1.3□□□□□ -2.2
SWI5YDR146C YPR195CQ06594 109 aa1.3□□□□□ -2.2
SWI5YDR146C VAC14Q06708 880 aa1.3□□□□□ -2.2
SWI5YDR146C YPL264CQ08980 353 aa1.3□□□□□ -2.2
SWI5YDR146C APC9Q12107 265 aa1.3□□□□□ -2.2
SWI5YDR146C SGT2Q12118 346 aaKnown RBP1.3□□□□□ -2.2
SWI5YDR146C YPS3Q12303 508 aa1.3□□□□□ -2.2
SWI5YDR146C PRP46Q12417 451 aaPredicted RBP1.3□□□□□ -2.2
SWI5YDR146C PFK27Q12471 397 aaPredicted RBP1.3□□□□□ -2.2
SWI5YDR146C HPR1P17629 752 aaKnown RBP1.29□□□□□ -2.2
SWI5YDR146C RPL5P26321 297 aaKnown RBP1.29□□□□□ -2.2
SWI5YDR146C AST1P35183 429 aa1.29□□□□□ -2.2
SWI5YDR146C YPC1P38298 316 aa1.29□□□□□ -2.2
SWI5YDR146C POP2P39008 433 aa1.29□□□□□ -2.2
SWI5YDR146C MNN9P39107 395 aaKnown RBP1.29□□□□□ -2.2
SWI5YDR146C GDS1P41913 522 aa1.29□□□□□ -2.2
SWI5YDR146C LOH1P47055 219 aa1.29□□□□□ -2.2
SWI5YDR146C MPP10P47083 593 aaKnown RBP1.29□□□□□ -2.2
SWI5YDR146C UFD1P53044 361 aa1.29□□□□□ -2.2
SWI5YDR146C RPN14P53196 417 aa1.29□□□□□ -2.2
SWI5YDR146C YMR111CQ04461 462 aaPredicted RBP1.29□□□□□ -2.2
SWI5YDR146C YOR292CQ08743 309 aa1.29□□□□□ -2.2
SWI5YDR146C ERP3Q12403 225 aa1.29□□□□□ -2.2
SWI5YDR146C TFC7Q12415 435 aa1.29□□□□□ -2.2
SWI5YDR146C DCP1Q12517 231 aaPredicted RBP1.29□□□□□ -2.2
SWI5YDR146C YAL063C-AQ3E791 96 aa1.29□□□□□ -2.2
SWI5YDR146C TDH3P00359 332 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
SWI5YDR146C CAR2P07991 424 aaKnown RBP1.28□□□□□ -2.2
SWI5YDR146C RPL31AP0C2H8 113 aaKnown RBP1.28□□□□□ -2.2
SWI5YDR146C CDC42P19073 191 aa1.28□□□□□ -2.2
SWI5YDR146C INO2P26798 304 aa1.28□□□□□ -2.2
SWI5YDR146C IME2P32581 645 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms