RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C SPO24Q3E752 67 aa3.47□□□□□ -1.85
TRM1YDR120C YLL053CP0CD98 152 aa3.47□□□□□ -1.85
TRM1YDR120C TCP1P12612 559 aaKnown RBP3.47□□□□□ -1.85
TRM1YDR120C UTR1P21373 530 aa3.47□□□□□ -1.85
TRM1YDR120C NUP2P32499 720 aa3.47□□□□□ -1.85
TRM1YDR120C IST2P38250 946 aa3.47□□□□□ -1.85
TRM1YDR120C AIP1P46680 615 aaKnown RBP3.47□□□□□ -1.85
TRM1YDR120C PGA2P53903 129 aa3.47□□□□□ -1.85
TRM1YDR120C SKI8Q02793 397 aaPredicted RBP3.47□□□□□ -1.85
TRM1YDR120C MHR1Q06630 226 aa3.47□□□□□ -1.85
TRM1YDR120C BEM2P39960 2167 aaKnown RBP3.46□□□□□ -1.86
TRM1YDR120C HEM4P06174 275 aa3.46□□□□□ -1.86
TRM1YDR120C HAP2P06774 265 aa3.46□□□□□ -1.86
TRM1YDR120C RNR2P09938 399 aaKnown RBP3.46□□□□□ -1.86
TRM1YDR120C ARF2P19146 181 aaKnown RBP3.46□□□□□ -1.86
TRM1YDR120C YKR015CP36111 568 aa3.46□□□□□ -1.86
TRM1YDR120C MRX3P38172 270 aa3.46□□□□□ -1.86
TRM1YDR120C YPT35P38815 214 aaKnown RBP3.46□□□□□ -1.86
TRM1YDR120C LSM12P38828 187 aaKnown RBP3.46□□□□□ -1.86
TRM1YDR120C RBG1P39729 369 aa3.46□□□□□ -1.86
TRM1YDR120C OSW5P40219 148 aa3.46□□□□□ -1.86
TRM1YDR120C YJR030CP47101 745 aa3.46□□□□□ -1.86
TRM1YDR120C CWC21Q03375 135 aaKnown RBP3.46□□□□□ -1.86
TRM1YDR120C VPS20Q04272 221 aa3.46□□□□□ -1.86
TRM1YDR120C STE23Q06010 1027 aa3.46□□□□□ -1.86
TRM1YDR120C TMC1Q08422 150 aaPredicted RBP3.46□□□□□ -1.86
TRM1YDR120C YDL109CQ12103 647 aa3.46□□□□□ -1.86
TRM1YDR120C MCT1Q12283 360 aa3.46□□□□□ -1.86
TRM1YDR120C RPL40AP0CH08 128 aaKnown RBP3.45□□□□□ -1.86
TRM1YDR120C RPL40BP0CH09 128 aaKnown RBP3.45□□□□□ -1.86
TRM1YDR120C MATALPHA2P0CY08 210 aa3.45□□□□□ -1.86
TRM1YDR120C HMLALPHA2P0CY09 210 aa3.45□□□□□ -1.86
TRM1YDR120C REV1P12689 985 aa3.45□□□□□ -1.86
TRM1YDR120C GAL3P13045 520 aa3.45□□□□□ -1.86
TRM1YDR120C PEX34P25584 144 aa3.45□□□□□ -1.86
TRM1YDR120C SPR1P32603 445 aa3.45□□□□□ -1.86
TRM1YDR120C COT1P32798 439 aa3.45□□□□□ -1.86
TRM1YDR120C PEX32P38292 413 aa3.45□□□□□ -1.86
TRM1YDR120C YDR089WP38966 869 aa3.45□□□□□ -1.86
TRM1YDR120C GIS2P53849 153 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
TRM1YDR120C ALG11P53954 548 aaKnown RBP3.45□□□□□ -1.86
TRM1YDR120C YMR010WQ03687 405 aa3.45□□□□□ -1.86
TRM1YDR120C IES4Q08561 116 aa3.45□□□□□ -1.86
TRM1YDR120C YDR262WQ12331 272 aa3.45□□□□□ -1.86
TRM1YDR120C COX4P04037 155 aa3.44□□□□□ -1.86
TRM1YDR120C RAD1P06777 1100 aa3.44□□□□□ -1.86
TRM1YDR120C CUP1-1P0CX80 61 aa3.44□□□□□ -1.86
TRM1YDR120C CUP1-2P0CX81 61 aa3.44□□□□□ -1.86
TRM1YDR120C FRS2P15625 503 aaKnown RBP3.44□□□□□ -1.86
TRM1YDR120C LDB16P25587 256 aa3.44□□□□□ -1.86
TRM1YDR120C CIN8P27895 1000 aa3.44□□□□□ -1.86
TRM1YDR120C MKK1P32490 508 aa3.44□□□□□ -1.86
TRM1YDR120C HMT1P38074 348 aa3.44□□□□□ -1.86
TRM1YDR120C MSC3Q05812 728 aa3.44□□□□□ -1.86
TRM1YDR120C RGS2Q99188 309 aa3.44□□□□□ -1.86
TRM1YDR120C UBA3Q99344 299 aa3.44□□□□□ -1.86
TRM1YDR120C ACC1Q00955 2233 aaKnown RBP3.44□□□□□ -1.86
TRM1YDR120C RPL23AP0CX41 137 aaKnown RBP3.44□□□□□ -1.86
TRM1YDR120C RPL23BP0CX42 137 aaKnown RBP3.44□□□□□ -1.86
TRM1YDR120C CDC50P25656 391 aa3.44□□□□□ -1.86
TRM1YDR120C OM14P38325 134 aa3.44□□□□□ -1.86
TRM1YDR120C SIP3P38717 1229 aa3.44□□□□□ -1.86
TRM1YDR120C HEM14P40012 539 aa3.44□□□□□ -1.86
TRM1YDR120C YCH1P42937 148 aa3.44□□□□□ -1.86
TRM1YDR120C YLR152CP54072 576 aa3.44□□□□□ -1.86
TRM1YDR120C HMS1Q12398 434 aa3.44□□□□□ -1.86
TRM1YDR120C CDC37P06101 506 aaKnown RBP3.43□□□□□ -1.86
TRM1YDR120C RPS14AP06367 137 aaKnown RBP3.43□□□□□ -1.86
TRM1YDR120C VPS1P21576 704 aaKnown RBP3.43□□□□□ -1.86
TRM1YDR120C GIT1P25346 518 aa3.43□□□□□ -1.86
TRM1YDR120C PCH2P38126 564 aa3.43□□□□□ -1.86
TRM1YDR120C RPS14BP39516 138 aaKnown RBP3.43□□□□□ -1.86
TRM1YDR120C SSO2P39926 295 aa3.43□□□□□ -1.86
TRM1YDR120C BTT1P40314 149 aaPredicted RBP3.43□□□□□ -1.86
TRM1YDR120C SHE10P53075 577 aa3.43□□□□□ -1.86
TRM1YDR120C CWC22P53333 577 aaKnown RBP3.43□□□□□ -1.86
TRM1YDR120C ABZ2Q03266 374 aa3.43□□□□□ -1.86
TRM1YDR120C FUS2Q05670 677 aa3.43□□□□□ -1.86
TRM1YDR120C LIP2Q06005 328 aa3.43□□□□□ -1.86
TRM1YDR120C SFM1Q12314 213 aa3.43□□□□□ -1.86
TRM1YDR120C VPS63O13549 108 aa3.42□□□□□ -1.86
TRM1YDR120C VPS3P23643 1011 aa3.42□□□□□ -1.86
TRM1YDR120C IML3P38265 245 aa3.42□□□□□ -1.86
TRM1YDR120C MED6P38782 295 aa3.42□□□□□ -1.86
TRM1YDR120C AIM20P40451 204 aa3.42□□□□□ -1.86
TRM1YDR120C DFG10P40526 253 aa3.42□□□□□ -1.86
TRM1YDR120C NAS6P50086 228 aa3.42□□□□□ -1.86
TRM1YDR120C RTC4P53850 401 aa3.42□□□□□ -1.86
TRM1YDR120C VAC7P53950 1165 aa3.42□□□□□ -1.86
TRM1YDR120C MDY2Q12285 212 aa3.42□□□□□ -1.86
TRM1YDR120C CBP2P03874 630 aaPredicted RBP3.41□□□□□ -1.86
TRM1YDR120C PRB1P09232 635 aa3.41□□□□□ -1.86
TRM1YDR120C RPL4AP10664 362 aaKnown RBP3.41□□□□□ -1.86
TRM1YDR120C PET18P25362 215 aa3.41□□□□□ -1.86
TRM1YDR120C ERG9P29704 444 aa3.41□□□□□ -1.86
TRM1YDR120C SDS24P38314 527 aa3.41□□□□□ -1.86
TRM1YDR120C PFS1P38872 237 aa3.41□□□□□ -1.86
TRM1YDR120C TIM17P39515 158 aa3.41□□□□□ -1.86
TRM1YDR120C TIS11P47977 285 aa3.41□□□□□ -1.86
TRM1YDR120C RPL4BP49626 362 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms