RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	TY1A-DR6	P0CX70	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-ER1	P0CX71	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-LR2	P0CX72	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-PL	P0CX73	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-JR1	P0CX74	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-LR3	P0CX75	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-ML2	P0CX76	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	NCP1	P16603	691 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	YPK2	P18961	677 aa		4.22	□□□□□ -1.73
APC4	YDR118W	RPL24B	P24000	155 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	ARO7	P32178	256 aa		4.22	□□□□□ -1.73
APC4	YDR118W	WBP1	P33767	430 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	JEN1	P36035	616 aa		4.22	□□□□□ -1.73
APC4	YDR118W	RRP4	P38792	359 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
APC4	YDR118W	BUR6	P40096	142 aa		4.22	□□□□□ -1.73
APC4	YDR118W	YIL067C	P40514	678 aa		4.22	□□□□□ -1.73
APC4	YDR118W	MDE1	P47095	244 aa		4.22	□□□□□ -1.73
APC4	YDR118W	COS10	P52924	374 aa		4.22	□□□□□ -1.73
APC4	YDR118W	YGL235W	P53071	178 aa		4.22	□□□□□ -1.73
APC4	YDR118W	VPS73	P53142	486 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	YGR054W	P53235	642 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	YNR062C	P53748	327 aa		4.22	□□□□□ -1.73
APC4	YDR118W	PGA1	P53896	198 aa		4.22	□□□□□ -1.73
APC4	YDR118W	SNO4	Q04902	237 aa		4.22	□□□□□ -1.73
APC4	YDR118W	PAL1	Q05518	499 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	SNT309	Q06091	175 aa	Predicted RBP	4.22	□□□□□ -1.73
APC4	YDR118W	YPR127W	Q06494	345 aa		4.22	□□□□□ -1.73
APC4	YDR118W	HSP33	Q08914	237 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	HSP32	Q08992	237 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-GR1	Q12085	440 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	TY1A-OL	Q92392	440 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	ACC1	Q00955	2233 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	ADE5,7	P07244	802 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	ARF1	P11076	181 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	STE4	P18851	423 aa		4.22	□□□□□ -1.73
APC4	YDR118W	HSP30	P25619	332 aa		4.22	□□□□□ -1.73
APC4	YDR118W	ZUO1	P32527	433 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	SUR1	P33300	382 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TPO5	P36029	618 aa		4.22	□□□□□ -1.73
APC4	YDR118W	ALG3	P38179	458 aa		4.22	□□□□□ -1.73
APC4	YDR118W	FAT1	P38225	669 aa		4.22	□□□□□ -1.73
APC4	YDR118W	SKN7	P38889	622 aa		4.22	□□□□□ -1.73
APC4	YDR118W	YNL208W	P40159	199 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	JLP2	P40206	208 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TOK1	P40310	691 aa		4.22	□□□□□ -1.73
APC4	YDR118W	CUP9	P41817	306 aa		4.22	□□□□□ -1.73
APC4	YDR118W	MNT4	P53745	580 aa		4.22	□□□□□ -1.73
APC4	YDR118W	MRPL19	P53875	158 aa		4.22	□□□□□ -1.73
APC4	YDR118W	EKI1	Q03764	534 aa		4.22	□□□□□ -1.73
APC4	YDR118W	YLR173W	Q06247	608 aa		4.22	□□□□□ -1.73
APC4	YDR118W	YDL114W	Q07530	308 aa		4.22	□□□□□ -1.73
APC4	YDR118W	ENB1	Q08299	606 aa		4.22	□□□□□ -1.73
APC4	YDR118W	MSH5	Q12175	901 aa		4.22	□□□□□ -1.73
APC4	YDR118W	PCL9	Q12477	304 aa		4.22	□□□□□ -1.73
APC4	YDR118W	PAR32	Q12515	295 aa	Known RBP	4.22	□□□□□ -1.73
APC4	YDR118W	YOS9	Q99220	542 aa		4.22	□□□□□ -1.73
APC4	YDR118W	TAD3	Q9URQ3	322 aa		4.22	□□□□□ -1.73
APC4	YDR118W	FAS1	P07149	2051 aa	Known RBP	4.21	□□□□□ -1.74
APC4	YDR118W	SEN1	Q00416	2231 aa	Known RBP	4.21	□□□□□ -1.74
APC4	YDR118W	PHO80	P20052	293 aa		4.21	□□□□□ -1.74
APC4	YDR118W	PRE2	P30656	287 aa	Known RBP	4.21	□□□□□ -1.74
APC4	YDR118W	PUP2	P32379	260 aa		4.21	□□□□□ -1.74
APC4	YDR118W	HSP150	P32478	413 aa		4.21	□□□□□ -1.74
APC4	YDR118W	YEF1	P32622	495 aa		4.21	□□□□□ -1.74
APC4	YDR118W	MTC4	P38335	694 aa	Known RBP	4.21	□□□□□ -1.74
APC4	YDR118W	YJL193W	P39542	402 aa		4.21	□□□□□ -1.74
APC4	YDR118W	YFR054C	P43622	192 aa		4.21	□□□□□ -1.74
APC4	YDR118W	RHO5	P53879	331 aa	Known RBP	4.21	□□□□□ -1.74
APC4	YDR118W	PEX25	Q02969	394 aa		4.21	□□□□□ -1.74
APC4	YDR118W	PLM2	Q04383	521 aa		4.21	□□□□□ -1.74
APC4	YDR118W	HLR1	Q04429	423 aa		4.21	□□□□□ -1.74
APC4	YDR118W	UTP21	Q06078	939 aa	Predicted RBP	4.21	□□□□□ -1.74
APC4	YDR118W	YLR346C	Q06139	101 aa		4.21	□□□□□ -1.74
APC4	YDR118W	YPS7	Q06325	596 aa		4.21	□□□□□ -1.74
APC4	YDR118W	CYK3	Q07533	885 aa		4.21	□□□□□ -1.74
APC4	YDR118W	AVO1	Q08236	1176 aa		4.21	□□□□□ -1.74
APC4	YDR118W	RKM1	Q08961	583 aa	Predicted RBP	4.21	□□□□□ -1.74
APC4	YDR118W	YOR289W	Q12012	251 aa	Predicted RBP	4.21	□□□□□ -1.74
APC4	YDR118W	YDL109C	Q12103	647 aa		4.21	□□□□□ -1.74
APC4	YDR118W	YDL177C	Q12257	170 aa		4.21	□□□□□ -1.74
APC4	YDR118W	RPL40A	P0CH08	128 aa	Known RBP	4.2	□□□□□ -1.74
APC4	YDR118W	RPL40B	P0CH09	128 aa	Known RBP	4.2	□□□□□ -1.74
APC4	YDR118W	CWH43	P25618	953 aa		4.2	□□□□□ -1.74
APC4	YDR118W	NPL6	P32832	435 aa		4.2	□□□□□ -1.74
APC4	YDR118W	YKL071W	P36086	256 aa		4.2	□□□□□ -1.74
APC4	YDR118W	MRPL16	P38064	232 aa		4.2	□□□□□ -1.74
APC4	YDR118W	GPX2	P38143	162 aa		4.2	□□□□□ -1.74
APC4	YDR118W	SHE1	P38200	338 aa		4.2	□□□□□ -1.74
APC4	YDR118W	FMP23	P38231	175 aa		4.2	□□□□□ -1.74
APC4	YDR118W	LEU5	P38702	357 aa		4.2	□□□□□ -1.74
APC4	YDR118W	RRF1	P38771	230 aa		4.2	□□□□□ -1.74
APC4	YDR118W	RPP1	P38786	293 aa		4.2	□□□□□ -1.74
APC4	YDR118W	YHR180W	P38868	163 aa		4.2	□□□□□ -1.74
APC4	YDR118W	NVJ1	P38881	321 aa		4.2	□□□□□ -1.74
APC4	YDR118W	PCL6	P40038	420 aa		4.2	□□□□□ -1.74
APC4	YDR118W	FMC1	P40491	155 aa		4.2	□□□□□ -1.74
APC4	YDR118W	HXT9	P40885	567 aa		4.2	□□□□□ -1.74
APC4	YDR118W	YJR098C	P47139	656 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms