RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	TAL1	P15019	335 aa	Known RBP	2.91	□□□□□ -1.94
UBS1	YBR165W	DAL81	P21657	970 aa		2.91	□□□□□ -1.94
UBS1	YBR165W	ARO4	P32449	370 aa	Known RBP	2.91	□□□□□ -1.94
UBS1	YBR165W	MED8	P38304	223 aa		2.91	□□□□□ -1.94
UBS1	YBR165W	ASP1	P38986	381 aa	Predicted RBP	2.91	□□□□□ -1.94
UBS1	YBR165W	PXR1	P53335	271 aa	Predicted RBP	2.91	□□□□□ -1.94
UBS1	YBR165W	CSI1	Q04368	295 aa		2.91	□□□□□ -1.94
UBS1	YBR165W	RBK1	P25332	333 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	UTR5	P32630	166 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	SIF2	P38262	535 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	CTM1	P38818	585 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	YFR045W	P43617	309 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	YGL088W	P53151	121 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	YLR012C	Q07927	99 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	TFC7	Q12415	435 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	SPO24	Q3E752	67 aa		2.9	□□□□□ -1.95
UBS1	YBR165W	CUE3	P53137	624 aa	Known RBP	2.89	□□□□□ -1.95
UBS1	YBR165W	YPL245W	Q12179	454 aa	Known RBP	2.89	□□□□□ -1.95
UBS1	YBR165W	NFI1	Q12216	726 aa		2.89	□□□□□ -1.95
UBS1	YBR165W	YDR262W	Q12331	272 aa		2.89	□□□□□ -1.95
UBS1	YBR165W	ERP3	Q12403	225 aa		2.89	□□□□□ -1.95
UBS1	YBR165W	ACB1	P31787	87 aa		2.88	□□□□□ -1.95
UBS1	YBR165W	MEI5	P32489	222 aa		2.88	□□□□□ -1.95
UBS1	YBR165W	BUD13	P46947	266 aa	Predicted RBP	2.88	□□□□□ -1.95
UBS1	YBR165W	YGL114W	P53134	725 aa		2.88	□□□□□ -1.95
UBS1	YBR165W	YNL146W	P53906	100 aa		2.88	□□□□□ -1.95
UBS1	YBR165W	YPL113C	Q02961	396 aa		2.88	□□□□□ -1.95
UBS1	YBR165W	DXO1	Q06349	442 aa		2.88	□□□□□ -1.95
UBS1	YBR165W	SPS100	P13130	326 aa		2.87	□□□□□ -1.95
UBS1	YBR165W	MRPL20	P22354	195 aa	Predicted RBP	2.87	□□□□□ -1.95
UBS1	YBR165W	MIG1	P27705	504 aa		2.87	□□□□□ -1.95
UBS1	YBR165W	VMA5	P31412	392 aa	Known RBP	2.87	□□□□□ -1.95
UBS1	YBR165W	PPQ1	P32945	549 aa		2.87	□□□□□ -1.95
UBS1	YBR165W	SCC4	P40090	624 aa		2.87	□□□□□ -1.95
UBS1	YBR165W	FYV8	P46949	817 aa	Known RBP	2.87	□□□□□ -1.95
UBS1	YBR165W	SHE4	P51534	789 aa		2.87	□□□□□ -1.95
UBS1	YBR165W	YNR066C	P53752	436 aa		2.87	□□□□□ -1.95
UBS1	YBR165W	RVB1	Q03940	463 aa	Known RBP	2.87	□□□□□ -1.95
UBS1	YBR165W	UBX2	Q04228	584 aa		2.87	□□□□□ -1.95
UBS1	YBR165W	PML1	Q07930	204 aa	Predicted RBP	2.87	□□□□□ -1.95
UBS1	YBR165W	TDH2	P00358	332 aa	Known RBP	2.86	□□□□□ -1.95
UBS1	YBR165W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.86	□□□□□ -1.95	not detected
UBS1	YBR165W	VPH2	P32341	215 aa		2.86	□□□□□ -1.95
UBS1	YBR165W	CSE1	P33307	960 aa		2.86	□□□□□ -1.95
UBS1	YBR165W	PET8	P38921	284 aa		2.86	□□□□□ -1.95
UBS1	YBR165W	PDR16	P53860	351 aa	Known RBP	2.86	□□□□□ -1.95
UBS1	YBR165W	YNL040W	P53960	456 aa	Predicted RBP	2.86	□□□□□ -1.95
UBS1	YBR165W	RLP24	Q07915	199 aa	Known RBP	2.86	□□□□□ -1.95
UBS1	YBR165W	CBP2	P03874	630 aa	Predicted RBP	2.85	□□□□□ -1.95
UBS1	YBR165W	YEL043W	P32618	956 aa		2.85	□□□□□ -1.95
UBS1	YBR165W	YFL040W	P43562	540 aa		2.85	□□□□□ -1.95
UBS1	YBR165W	PSY3	Q12318	242 aa		2.85	□□□□□ -1.95
UBS1	YBR165W	MET2	P08465	486 aa		2.84	□□□□□ -1.95
UBS1	YBR165W	LIN1	P38852	340 aa	Predicted RBP	2.84	□□□□□ -1.95
UBS1	YBR165W	EDC2	P40023	145 aa	Predicted RBP	2.84	□□□□□ -1.95
UBS1	YBR165W	IES3	Q12345	250 aa		2.84	□□□□□ -1.95
UBS1	YBR165W	APE4	P38821	490 aa		2.83	□□□□□ -1.96
UBS1	YBR165W	UFD1	P53044	361 aa		2.83	□□□□□ -1.96
UBS1	YBR165W	YGR016W	P53209	190 aa		2.83	□□□□□ -1.96
UBS1	YBR165W	YOR292C	Q08743	309 aa		2.83	□□□□□ -1.96
UBS1	YBR165W	RNR2	P09938	399 aa	Known RBP	2.82	□□□□□ -1.96
UBS1	YBR165W	SUR1	P33300	382 aa		2.82	□□□□□ -1.96
UBS1	YBR165W	SOP4	P39543	234 aa	Predicted RBP	2.82	□□□□□ -1.96
UBS1	YBR165W	ECO1	P43605	281 aa		2.82	□□□□□ -1.96
UBS1	YBR165W	RSA4	P25382	515 aa	Known RBP	2.81	□□□□□ -1.96
UBS1	YBR165W	NAS2	P40555	220 aa		2.81	□□□□□ -1.96
UBS1	YBR165W	YPL080C	Q02826	108 aa		2.81	□□□□□ -1.96
UBS1	YBR165W	SEC13	Q04491	297 aa	Known RBP	2.81	□□□□□ -1.96
UBS1	YBR165W	YDR114C	Q04597	100 aa		2.81	□□□□□ -1.96
UBS1	YBR165W	BUR2	Q05949	395 aa		2.81	□□□□□ -1.96
UBS1	YBR165W	VIK1	Q12045	647 aa		2.81	□□□□□ -1.96
UBS1	YBR165W	CDC42	P19073	191 aa		2.8	□□□□□ -1.96
UBS1	YBR165W	UIP5	P36137	443 aa		2.8	□□□□□ -1.96
UBS1	YBR165W	AIM29	P36154	155 aa		2.8	□□□□□ -1.96
UBS1	YBR165W	CLP1	Q08685	445 aa	Predicted RBP	2.8	□□□□□ -1.96
UBS1	YBR165W	MRX4	Q12467	430 aa		2.8	□□□□□ -1.96
UBS1	YBR165W	ERD1	P16151	362 aa		2.79	□□□□□ -1.96
UBS1	YBR165W	KRE1	P17260	313 aa		2.79	□□□□□ -1.96
UBS1	YBR165W	PRE7	P23724	241 aa	Known RBP	2.79	□□□□□ -1.96
UBS1	YBR165W	YHL044W	P38727	235 aa		2.79	□□□□□ -1.96
UBS1	YBR165W	INA22	P40576	216 aa		2.79	□□□□□ -1.96
UBS1	YBR165W	IRC4	Q03036	179 aa		2.79	□□□□□ -1.96
UBS1	YBR165W	YOL163W	P0CF20	169 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	GPX1	P36014	167 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	YKR032W	P36127	104 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	YHR035W	P38769	630 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	YER084W	P40057	128 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	LIF1	P53150	421 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	YGR168C	P53293	376 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	SNX41	Q04053	625 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	FEX1	Q08913	375 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	FEX2	Q08991	375 aa		2.78	□□□□□ -1.96
UBS1	YBR165W	RPL18A	P0CX49	186 aa	Known RBP	2.77	□□□□□ -1.97
UBS1	YBR165W	RPL18B	P0CX50	186 aa	Known RBP	2.77	□□□□□ -1.97
UBS1	YBR165W	GAL3	P13045	520 aa		2.77	□□□□□ -1.97
UBS1	YBR165W	MIX17	Q03667	156 aa		2.77	□□□□□ -1.97
UBS1	YBR165W	PEX30	Q06169	523 aa		2.77	□□□□□ -1.97
UBS1	YBR165W	YLR446W	Q06204	433 aa		2.77	□□□□□ -1.97
UBS1	YBR165W	YAK1	P14680	807 aa		2.76	□□□□□ -1.97
UBS1	YBR165W	MCH2	P36032	473 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 110.9 ms