RNA–Protein interactions for RNA: YBL100W-B

YBL100W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YBL100W-B, Length 5,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL100W-BYBL100W-B ITR1P30605 584 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B RPN12P32496 274 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B YBL081WP38180 368 aaKnown RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B ECM14P38836 430 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B CHL4P38907 458 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B YER188WP40103 239 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B LCB2P40970 561 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B CAK1P43568 368 aaPredicted RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B CDH1P53197 566 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B YGR015CP53208 328 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B CAB4P53332 305 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B HST4P53688 370 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B YNR062CP53748 327 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B SUB1P54000 292 aaKnown RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B TIM10P87108 93 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B PRP38Q00723 242 aaPredicted RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B PRP3Q03338 469 aaPredicted RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B RVB1Q03940 463 aaKnown RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B RNH1Q04740 348 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B INM2Q05533 292 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B SNT309Q06091 175 aaPredicted RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B YDL144CQ07589 356 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B PEX27Q08580 376 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B GIS3Q12418 502 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B YGR035W-AQ45U48 73 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B OPI3P05375 206 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B SPO23P33757 523 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B IML3P38265 245 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B RBG1P39729 369 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B IES5P40060 125 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B PAM16P42949 149 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B TMA23Q03525 211 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B SCS7Q03529 384 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B CTS2Q06350 511 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B TIR4Q12218 487 aaPredicted RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B ATO3Q12359 275 aa0.23□□□□□ -2.37
YBL100W-BYBL100W-B DCP1Q12517 231 aaPredicted RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B DDP1Q99321 188 aaKnown RBP0.23□□□□□ -2.37
YBL100W-BYBL100W-B SKI3P17883 1432 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B HEM4P06174 275 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B SPT3P06844 337 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B POL30P15873 258 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B GCG1P32656 232 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B PDC2P32896 925 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B PXA2P34230 853 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MRPL27P36526 146 aaPredicted RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B FIG1P38224 298 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B GPI16P38875 610 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B PCL7P40186 285 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B UFE1P41834 346 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B RPA49Q01080 415 aaPredicted RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B YMR279CQ03263 540 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B RMT2Q03305 412 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B YDL241WQ07738 123 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B YPL272CQ08984 517 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B ATP16Q12165 160 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MDM32Q12171 622 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B RMD5Q12508 421 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B VPS15P22219 1454 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B YHR139C-AO13536 103 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B SSC1P0CS90 654 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B OM45P16547 393 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B SNF6P18888 332 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B ECT1P33412 323 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B SEC66P33754 206 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MCR1P36060 302 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B BYE1P36106 594 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B YBR220CP38318 560 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B YMR262WP38430 313 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B IPT1P38954 527 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B ALP1P38971 573 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B BDH1P39714 382 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MPM1P40364 252 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B PAC11P40960 533 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MOB2P43563 287 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MOG1P47123 218 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B PMT5P52867 743 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B POP3P53833 195 aaPredicted RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B API2Q04413 109 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B PIN3Q06449 215 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B PDR10P51533 1564 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B RPL30P14120 105 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B YAK1P14680 807 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MRPL20P22354 195 aaPredicted RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B MIG1P27705 504 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B MGM101P32787 269 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B TKL2P33315 681 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B HEK2P38199 381 aaKnown RBP RIP-Chip data0.22□□□□□ -2.37not detected
YBL100W-BYBL100W-B SPT8P38915 602 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B PEX17P40155 199 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B RPA43P46669 326 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B ROG1P53118 685 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B YDR541CQ03049 344 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B INP1Q03694 420 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B ROY1Q04847 553 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B YOR114WQ12219 294 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B GRX6Q12438 231 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B VPS63O13549 108 aa0.22□□□□□ -2.37
YBL100W-BYBL100W-B RPL43AP0CX25 92 aaKnown RBP0.22□□□□□ -2.37
YBL100W-BYBL100W-B RPL43BP0CX26 92 aa0.22□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms