RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W THI4P32318 326 aa5.09□□□□□ -1.59
SHP1YBL058W HIR2P32480 875 aa5.09□□□□□ -1.59
SHP1YBL058W RFC3P38629 340 aa5.09□□□□□ -1.59
SHP1YBL058W ECM14P38836 430 aa5.09□□□□□ -1.59
SHP1YBL058W YER084WP40057 128 aa5.09□□□□□ -1.59
SHP1YBL058W YFL066CP43538 392 aa5.09□□□□□ -1.59
SHP1YBL058W NUP57P48837 541 aa5.09□□□□□ -1.59
SHP1YBL058W MPC1P53157 130 aaKnown RBP5.09□□□□□ -1.59
SHP1YBL058W YGR045CP53229 120 aa5.09□□□□□ -1.59
SHP1YBL058W TPS1Q00764 495 aaKnown RBP5.09□□□□□ -1.59
SHP1YBL058W DYN3Q04949 312 aa5.09□□□□□ -1.59
SHP1YBL058W ARO10Q06408 635 aa5.09□□□□□ -1.59
SHP1YBL058W SYO1Q07395 620 aa5.09□□□□□ -1.59
SHP1YBL058W CRT10Q08226 957 aa5.09□□□□□ -1.59
SHP1YBL058W THI72Q08579 599 aa5.09□□□□□ -1.59
SHP1YBL058W YPR202WQ08993 238 aa5.09□□□□□ -1.59
SHP1YBL058W YLR125WQ12138 136 aa5.09□□□□□ -1.59
SHP1YBL058W YER145C-AA0A023PYF4 145 aa5.08□□□□□ -1.6
SHP1YBL058W REP1P03871 373 aa5.08□□□□□ -1.6
SHP1YBL058W SEC12P11655 471 aa5.08□□□□□ -1.6
SHP1YBL058W EXG1P23776 448 aaKnown RBP5.08□□□□□ -1.6
SHP1YBL058W RPB9P27999 122 aa5.08□□□□□ -1.6
SHP1YBL058W DGR2P32330 852 aa5.08□□□□□ -1.6
SHP1YBL058W MCM10P32354 571 aa5.08□□□□□ -1.6
SHP1YBL058W GSH1P32477 678 aa5.08□□□□□ -1.6
SHP1YBL058W MSN4P33749 630 aa5.08□□□□□ -1.6
SHP1YBL058W HCS1P34243 683 aa5.08□□□□□ -1.6
SHP1YBL058W YIL166CP40445 542 aa5.08□□□□□ -1.6
SHP1YBL058W YIL029CP40538 142 aa5.08□□□□□ -1.6
SHP1YBL058W IRC7P43623 340 aa5.08□□□□□ -1.6
SHP1YBL058W BRR6P53062 197 aa5.08□□□□□ -1.6
SHP1YBL058W USE1P53146 245 aa5.08□□□□□ -1.6
SHP1YBL058W COG2P53271 262 aa5.08□□□□□ -1.6
SHP1YBL058W MEP3P53390 489 aa5.08□□□□□ -1.6
SHP1YBL058W MPP6P53725 186 aaPredicted RBP5.08□□□□□ -1.6
SHP1YBL058W CRZ1P53968 678 aa5.08□□□□□ -1.6
SHP1YBL058W SED1Q01589 338 aa5.08□□□□□ -1.6
SHP1YBL058W YDR102CQ03864 110 aa5.08□□□□□ -1.6
SHP1YBL058W RSM24Q03976 319 aa5.08□□□□□ -1.6
SHP1YBL058W RSA3Q05942 220 aaKnown RBP5.08□□□□□ -1.6
SHP1YBL058W GGA1Q06336 557 aa5.08□□□□□ -1.6
SHP1YBL058W PSR1Q07800 427 aa5.08□□□□□ -1.6
SHP1YBL058W COQ10Q08058 207 aa5.08□□□□□ -1.6
SHP1YBL058W YPL191CQ08930 360 aa5.08□□□□□ -1.6
SHP1YBL058W SRL2Q12020 392 aa5.08□□□□□ -1.6
SHP1YBL058W RTC5Q12108 567 aaKnown RBP5.08□□□□□ -1.6
SHP1YBL058W RIB2Q12362 591 aaKnown RBP5.08□□□□□ -1.6
SHP1YBL058W HMS1Q12398 434 aa5.08□□□□□ -1.6
SHP1YBL058W YHR214C-EQ8TGK0 99 aa5.08□□□□□ -1.6
SHP1YBL058W YOL163WP0CF20 169 aa5.07□□□□□ -1.6
SHP1YBL058W NUP1P20676 1076 aa5.07□□□□□ -1.6
SHP1YBL058W GIT1P25346 518 aa5.07□□□□□ -1.6
SHP1YBL058W YCR100CP25606 316 aa5.07□□□□□ -1.6
SHP1YBL058W SNC1P31109 117 aa5.07□□□□□ -1.6
SHP1YBL058W RPN2P32565 945 aaKnown RBP5.07□□□□□ -1.6
SHP1YBL058W HBS1P32769 611 aaKnown RBP5.07□□□□□ -1.6
SHP1YBL058W ECM15P35195 104 aa5.07□□□□□ -1.6
SHP1YBL058W NNK1P36003 928 aa5.07□□□□□ -1.6
SHP1YBL058W CUE2P36075 443 aaKnown RBP5.07□□□□□ -1.6
SHP1YBL058W YIR020CP40575 100 aa5.07□□□□□ -1.6
SHP1YBL058W GCN20P43535 752 aaKnown RBP5.07□□□□□ -1.6
SHP1YBL058W TRS85P46944 698 aa5.07□□□□□ -1.6
SHP1YBL058W YGL235WP53071 178 aa5.07□□□□□ -1.6
SHP1YBL058W YNR062CP53748 327 aa5.07□□□□□ -1.6
SHP1YBL058W CIK1Q01649 594 aa5.07□□□□□ -1.6
SHP1YBL058W PET191Q02772 108 aa5.07□□□□□ -1.6
SHP1YBL058W SEC13Q04491 297 aaKnown RBP5.07□□□□□ -1.6
SHP1YBL058W RNH202Q05635 350 aa5.07□□□□□ -1.6
SHP1YBL058W YPR127WQ06494 345 aa5.07□□□□□ -1.6
SHP1YBL058W SKI7Q08491 747 aaPredicted RBP5.07□□□□□ -1.6
SHP1YBL058W YDL199CQ12407 687 aa5.07□□□□□ -1.6
SHP1YBL058W APC2Q12440 853 aa5.07□□□□□ -1.6
SHP1YBL058W RTN2Q12443 393 aa5.07□□□□□ -1.6
SHP1YBL058W RPS16AP0CX51 143 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W RPS16BP0CX52 143 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W UGA1P17649 471 aa5.06□□□□□ -1.6
SHP1YBL058W PET9P18239 318 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W CNA1P23287 553 aa5.06□□□□□ -1.6
SHP1YBL058W RHB1P25378 209 aa5.06□□□□□ -1.6
SHP1YBL058W RER1P25560 188 aa5.06□□□□□ -1.6
SHP1YBL058W CAM1P29547 415 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W ARP2P32381 391 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W PUB1P32588 453 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SHP1YBL058W ARC19P33204 171 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W GDH2P33327 1092 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W RPP1P38786 293 aa5.06□□□□□ -1.6
SHP1YBL058W PEX18P38855 283 aa5.06□□□□□ -1.6
SHP1YBL058W RSP5P39940 809 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W GDI1P39958 451 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W YEL068CP39977 110 aa5.06□□□□□ -1.6
SHP1YBL058W ISC1P40015 477 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W PIG2P40187 538 aa5.06□□□□□ -1.6
SHP1YBL058W MPM1P40364 252 aa5.06□□□□□ -1.6
SHP1YBL058W NAS2P40555 220 aa5.06□□□□□ -1.6
SHP1YBL058W EGT2P42835 1041 aa5.06□□□□□ -1.6
SHP1YBL058W CAK1P43568 368 aaPredicted RBP5.06□□□□□ -1.6
SHP1YBL058W NCA3P46955 337 aa5.06□□□□□ -1.6
SHP1YBL058W IMD4P50094 524 aaKnown RBP5.06□□□□□ -1.6
SHP1YBL058W MTM1P53320 366 aa5.06□□□□□ -1.6
SHP1YBL058W YNL033WP53964 284 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms