RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	USHBP1	Q8N6Y0	703 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	PPFIBP2	Q8ND30	876 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	COL26A1	Q96A83	441 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	EFHD2	Q96C19	240 aa	Predicted RBP	6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	CYFIP2	Q96F07	1278 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	CGREF1	Q99674	301 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	SPZ1	Q9BXG8	430 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	HPF1	Q9NWY4	346 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	TTC7A	Q9ULT0	858 aa	Predicted RBP	6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	PLAA	Q9Y263	795 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	AXIN2	Q9Y2T1	843 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	TELO2	Q9Y4R8	837 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	DGKB	Q9Y6T7	804 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	GRIN2D	O15399	1336 aa		6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.57	□□□□□ -1.36
NECAP1-222	ENST00000640072		A0A0G2JPF8	293 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SLC12A8	A0AV02	714 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	VWA3A	A6NCI4	1184 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	GOLGA8CP	A6NN73	597 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	HNRNPCL3	B7ZW38	293 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072		H3BRB1	525 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CD4	P01730	458 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	HNRNPCL4	P0DMR1	293 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CPA1	P15085	419 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	GART	P22102	1010 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SP100	P23497	879 aa	Predicted RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	PHKA1	P46020	1223 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	NNT	Q13423	1086 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	LIN54	Q6MZP7	749 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	XRRA1	Q6P2D8	792 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	B3GNT6	Q6ZMB0	384 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	RUFY4	Q6ZNE9	571 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ENOSF1	Q7L5Y1	443 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	PPP1R42	Q7Z4L9	355 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	TTC6	Q86TZ1	520 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ST13P4	Q8IZP2	240 aa	Predicted RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ARMC5	Q96C12	935 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CCDC42	Q96M95	316 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	BHMT2	Q9H2M3	363 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	TUT1	Q9H6E5	874 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	LARS	Q9P2J5	1176 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	GRID1	Q9ULK0	1009 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CLEC4A	Q9UMR7	237 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	DMTF1	Q9Y222	760 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	UBN2	Q6ZU65	1347 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ARHGAP35	Q9NRY4	1499 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072		A0A1W2PQ67	120 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	LRRIQ4	A6NIV6	560 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SMIM23	A6NLE4	172 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	INO80B-WBP1	J3KQ70	363 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	MAPK13	O15264	365 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	HOXC11	O43248	304 aa	Predicted RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	B4GALT4	O60513	344 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CCNT1	O60563	726 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	PDE5A	O76074	875 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	LTA4H	P09960	611 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	GSTT2	P0CG29	244 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	GSTT2B	P0CG30	244 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ACAT1	P24752	427 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ETV1	P50549	477 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	RIPK1	Q13546	671 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	MORC3	Q14149	939 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CCDC6	Q16204	474 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	INSC	Q1MX18	579 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	MDH1B	Q5I0G3	518 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	AADACL4	Q5VUY2	407 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SPECC1L	Q69YQ0	1117 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	NEPRO	Q6NW34	567 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CACNA2D4	Q7Z3S7	1137 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	DQX1	Q8TE96	717 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SDCCAG3	Q96C92	435 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SNF8	Q96H20	258 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	IFT74	Q96LB3	600 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	LPIN3	Q9BQK8	851 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SYT15	Q9BQS2	421 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	PUS3	Q9BZE2	481 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	WNT5B	Q9H1J7	359 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SNX25	Q9H3E2	840 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZFYVE28	Q9HCC9	887 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ERBIN	Q96RT1	1412 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	GPR75-ASB3	A0A0A6YYF3	556 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SNTN	A6NMZ2	147 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	SLC7A4	O43246	635 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	KCNH1	O95259	989 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CAPN3	P20807	821 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	HOXC12	P31275	282 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	RPL9	P32969	192 aa	Known RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	TRIM23	P36406	574 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CBX5	P45973	191 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	CYP4F8	P98187	520 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	IL1RL1	Q01638	556 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	PPP2R5D	Q14738	602 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	AMHR2	Q16671	573 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ITPRIPL1	Q6GPH6	555 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	NKAIN3	Q8N8D7	197 aa		6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	ZNF594	Q96JF6	807 aa	Predicted RBP	6.56	□□□□□ -1.36
NECAP1-222	ENST00000640072	FAM20A	Q96MK3	541 aa		6.56	□□□□□ -1.36

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