RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 PSMC2P35998 433 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 HIRAP54198 1017 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CDK17Q00537 523 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CENPCQ03188 943 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 GIT2Q14161 759 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CTXN3Q4LDR2 81 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CMTR1Q8N1G2 835 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 ATL2Q8NHH9 583 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 IFT81Q8WYA0 676 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 MUC3BQ9H195 1237 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 MAGEF1Q9HAY2 307 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 SP110Q9HB58 689 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 PRR12Q9ULL5 1215 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 GOLGA8QA0A0J9YX86 632 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 GOLGA8OA6NCC3 632 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 GOLGA8NF8WBI6 632 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 PPFIA4O75335 1185 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 ADCY5O95622 1261 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CLTBP09497 229 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 VCAM1P19320 739 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 ELOAQ14241 798 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 RPS6KA2Q15349 733 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 GPR142Q7Z601 462 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CROCCP2Q86T23 111 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 IFNL1Q8IU54 200 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 FBXO16Q8IX29 292 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CYP2D7A0A087X1C5 515 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 KRT86O43790 486 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 PRKCBP05771 671 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 MBL2P11226 248 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 STX17P56962 302 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 IRX5P78411 483 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CDH18Q13634 790 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 MFSD10Q14728 455 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 OSCP1Q8WVF1 389 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 APBB2Q92870 758 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 ATP6V1E2Q96A05 226 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 POLR3FQ9H1D9 316 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 SENP2Q9HC62 589 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 MTRF1LQ9UGC7 380 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 SLC13A4Q9UKG4 626 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 INPP4BO15327 924 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 PRKAB2O43741 272 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 HSPA8P11142 646 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 SOX5P35711 763 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 PNPLA4P41247 253 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 SLC11A2P49281 568 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 PRIMPOLQ96LW4 560 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 CDK5RAP1Q96SZ6 601 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 P2RX7Q99572 595 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 ATXN3LQ9H3M9 355 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 RAB20Q9NX57 234 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 DDX20Q9UHI6 824 aaKnown RBP5.38□□□□□ -1.55
SCN1A-218ENST00000640036 PPP1R9AQ9ULJ8 1098 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 MAD1L1Q9Y6D9 718 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 ZMYM6O95789 1325 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 RFX7Q2KHR2 1363 aa5.38□□□□□ -1.55
SCN1A-218ENST00000640036 MOXD2PA6NHM9 499 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 DGAT1O75907 488 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 MAN1A1P33908 653 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 TUFMP49411 452 aaKnown RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 VEGFBP49765 207 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 THOP1P52888 689 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 RBP5P82980 135 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 ITGA7Q13683 1181 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 ZMYM1Q5SVZ6 1142 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 ILDR2Q71H61 639 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 SMC5Q8IY18 1101 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 ADGRF4Q8IZF3 695 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 PIK3R5Q8WYR1 880 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 TRIM11Q96F44 468 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 SAMD11Q96NU1 681 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 DBNLQ9UJU6 430 aaKnown RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 UNCXA6NJT0 531 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 DDX5P17844 614 aaKnown RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 CD58P19256 250 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 PFKPQ01813 784 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 CACNB2Q08289 660 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 GPM6BQ13491 265 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 POLD3Q15054 466 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 NOL9Q5SY16 702 aaKnown RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 THEMIS2Q5TEJ8 643 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 SCARA5Q6ZMJ2 495 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 ARHGAP24Q8N264 748 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 APOL5Q9BWW9 433 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 MAGEB5Q9BZ81 275 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 RASSF4Q9H2L5 321 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 KIDINS220Q9ULH0 1771 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 SPATA31E1Q6ZUB1 1445 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 C3P01024 1663 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 DYRK3O43781 588 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 WEE1P30291 646 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 LONP1P36776 959 aaKnown RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 C16orf72Q14CZ0 275 aa5.37□□□□□ -1.55
SCN1A-218ENST00000640036 SUZ12Q15022 739 aaKnown RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 E4F1Q66K89 784 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 KIAA1324Q6UXG2 1013 aaKnown RBP5.37□□□□□ -1.55
SCN1A-218ENST00000640036 ZNF274Q96GC6 653 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms