RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 GJC2Q5T442 439 aaPredicted RBP7.18□□□□□ -1.26
SCARB2-207ENST00000638295 TYW1BQ6NUM6 668 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 MOXD1Q6UVY6 613 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 YAF2Q8IY57 180 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 BANK1Q8NDB2 785 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 ENOX1Q8TC92 643 aaKnown RBP7.18□□□□□ -1.26
SCARB2-207ENST00000638295 HVCN1Q96D96 273 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 RNPC3Q96LT9 517 aaKnown RBP7.18□□□□□ -1.26
SCARB2-207ENST00000638295 ACAP3Q96P50 834 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 EIF2AK1Q9BQI3 630 aaKnown RBP7.18□□□□□ -1.26
SCARB2-207ENST00000638295 RAB17Q9H0T7 212 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 HAUS4Q9H6D7 363 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 C17orf75Q9HAS0 396 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 LMBRD1Q9NUN5 540 aa7.18□□□□□ -1.26
SCARB2-207ENST00000638295 MYOM1P52179 1685 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 CEP104O60308 925 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 EGFRP00533 1210 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 GRIK5Q16478 980 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 DNAJC24Q6P3W2 148 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PPP1R21Q6ZMI0 780 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 MSL3Q8N5Y2 521 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 TMEM35BQ8NCS4 154 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 HEXIM2Q96MH2 286 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PCIF1Q9H4Z3 704 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 TYW1Q9NV66 732 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 DDX20Q9UHI6 824 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 FARP1Q9Y4F1 1045 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 TTLL3Q9Y4R7 772 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 AFG3L2Q9Y4W6 797 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 SLC4A7Q9Y6M7 1214 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 SCINQ9Y6U3 715 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 COL1A1P02452 1464 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 KIAA0100Q14667 2235 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 FOXN1O15353 648 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 IKBKEQ14164 716 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 NOLC1Q14978 699 aaKnown RBP eCLIP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 ZNF699Q32M78 642 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 LDLRAD1Q5T700 205 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 DLK2Q6UY11 383 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PIGOQ8TEQ8 1089 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 UBE2Q2Q8WVN8 375 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PIN4Q9Y237 131 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PCDHB7Q9Y5E2 793 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 SPDYE16A6NNV3 312 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 GPR182O15218 404 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PGK1P00558 417 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PRKCBP05771 671 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 YWHABP31946 246 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PTPROQ16827 1216 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 NAALADL2Q58DX5 795 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 C8orf74Q6P047 294 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 CC2D1AQ6P1N0 951 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 LRRC31Q6UY01 552 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 OTOP1Q7RTM1 612 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 CCDC105Q8IYK2 499 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 RNF149Q8NC42 400 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 ATP2A3Q93084 1043 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 TMEM169Q96HH4 297 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 FAM107BQ9H098 131 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 STAP1Q9ULZ2 295 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 THSD7AQ9UPZ6 1657 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 CLIC2O15247 247 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 SEPT4O43236 478 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 CRCPO75575 148 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 HEXIM1O94992 359 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PARNO95453 639 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 PPARGP37231 505 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 EXOSC10Q01780 885 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 ITKQ08881 620 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 TOB2Q14106 344 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 TREML2Q5T2D2 321 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 OR6B2Q6IFH4 312 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 CCDC25Q86WR0 208 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 NME8Q8N427 588 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 SRBD1Q8N5C6 995 aaKnown RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 P3H4Q92791 437 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 ZFP91Q96JP5 570 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-207ENST00000638295 ZKSCAN5Q9Y2L8 839 aa7.17□□□□□ -1.26
SCARB2-207ENST00000638295 ITGA4P13612 1032 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 CPB1P15086 417 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
SCARB2-207ENST00000638295 IFT20Q8IY31 132 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 CCSER1Q9C0I3 900 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 PCDHB12Q9Y5F1 795 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 TADA2AO75478 443 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 ITGBL1O95965 494 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-207ENST00000638295 RALAP11233 206 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 TCP1P17987 556 aaKnown RBP7.16□□□□□ -1.26
SCARB2-207ENST00000638295 TAF2Q6P1X5 1199 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 DCP1BQ8IZD4 617 aaKnown RBP7.16□□□□□ -1.26
SCARB2-207ENST00000638295 ABRAQ8N0Z2 381 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 STAG2Q8N3U4 1231 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 AFG1LQ8WV93 481 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 COLEC11Q9BWP8 271 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 C4AP0C0L4 1744 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 SLC16A4O15374 487 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 ABCB4P21439 1286 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 SNX17Q15036 470 aa7.16□□□□□ -1.26
SCARB2-207ENST00000638295 LRRC41Q15345 812 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms