RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CEP170P1Q96L14 293 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 KIFC3Q9BVG8 833 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 DAAM1Q9Y4D1 1078 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 AFG3L2Q9Y4W6 797 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 SSC5DA1L4H1 1573 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 ZNF862O60290 1169 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 TNNT3P45378 269 aaPredicted RBP23.37■■□□□ 1.33
CLN6-224ENST00000638076 NPTX2P47972 431 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 GCLMP48507 274 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 SMTNP53814 917 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 MRPS25P82663 173 aaKnown RBP23.37■■□□□ 1.33
CLN6-224ENST00000638076 CETN1Q12798 172 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 DMP1Q13316 513 aaPredicted RBP23.37■■□□□ 1.33
CLN6-224ENST00000638076 ZNF771Q7L3S4 317 aaPredicted RBP23.37■■□□□ 1.33
CLN6-224ENST00000638076 OTUD6AQ7L8S5 288 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 GOLPH3Q9H4A6 298 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 INTUQ9ULD6 942 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 TELO2Q9Y4R8 837 aa23.37■■□□□ 1.33
CLN6-224ENST00000638076 SPDYE16A6NNV3 312 aaPredicted RBP23.36■■□□□ 1.33
CLN6-224ENST00000638076 N4BP1O75113 896 aaKnown RBP23.36■■□□□ 1.33
CLN6-224ENST00000638076 CCDC172P0C7W6 258 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 SP4Q02446 784 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 C1orf220Q5T0J3 134 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 LRRC57Q8N9N7 239 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 PLEKHO2Q8TD55 490 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 ATP6V0A1Q93050 837 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 TBX20Q9UMR3 447 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 PPP2R3BQ9Y5P8 575 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 LMNB1P20700 586 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 RFX1P22670 979 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 SLC7A5Q01650 507 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 RPS6KA1Q15418 735 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 NOL9Q5SY16 702 aaKnown RBP23.36■■□□□ 1.33
CLN6-224ENST00000638076 SWSAP1Q6NVH7 229 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 FMNL3Q8IVF7 1028 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 TPCN2Q8NHX9 752 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 SYT11Q9BT88 431 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 JPH1Q9HDC5 661 aaPredicted RBP23.36■■□□□ 1.33
CLN6-224ENST00000638076 HOXC10Q9NYD6 342 aa23.36■■□□□ 1.33
CLN6-224ENST00000638076 GOLGA8IPA6NC78 632 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 GOLGA8JA6NMD2 632 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 MAPK13O15264 365 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 LRRN2O75325 713 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 GALCP54803 685 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 SOX10P56693 466 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 GDAP1L1Q96MZ0 367 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 UBE2TQ9NPD8 197 aaPredicted RBP23.35■■□□□ 1.33
CLN6-224ENST00000638076 EXOC7Q9UPT5 735 aa23.35■■□□□ 1.33
CLN6-224ENST00000638076 A0A0A6YYK5 440 aaPredicted RBP23.34■■□□□ 1.33
CLN6-224ENST00000638076 ANKRD63C9JTQ0 380 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 FOXN3O00409 490 aaPredicted RBP23.34■■□□□ 1.33
CLN6-224ENST00000638076 P4HA2O15460 535 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 PSAPP07602 524 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 ADSSP30520 456 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 EPC2Q52LR7 807 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 BSNDQ8WZ55 320 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 TAF4BQ92750 862 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 CDHR1Q96JP9 859 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 KMT5AQ9NQR1 393 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 SLC9A2Q9UBY0 812 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 DENND3A2RUS2 1198 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 TMCO5BA8MYB1 307 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 SORBS3O60504 671 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 STBD1O95210 358 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 KIF4AO95239 1232 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 ADRB2P07550 413 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 FAM193AP78312 1265 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 SUPT20HL1Q3ZLR7 823 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 C8orf74Q6P047 294 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 MAP4K3Q8IVH8 894 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 GPC2Q8N158 579 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 RUBCNQ92622 972 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 KIFAP3Q92845 792 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 KIAA1217Q5T5P2 1943 aa23.34■■□□□ 1.33
CLN6-224ENST00000638076 NFASCO94856 1347 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 KCNK3O14649 394 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 DKC1O60832 514 aaKnown RBP eCLIP23.33■■□□□ 1.33
CLN6-224ENST00000638076 RNASE9P60153 205 aaKnown RBP23.33■■□□□ 1.33
CLN6-224ENST00000638076 PTPROQ16827 1216 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 ARHGEF19Q8IW93 802 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.33■■□□□ 1.33
CLN6-224ENST00000638076 ACBD3Q9H3P7 528 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 VIPAS39Q9H9C1 493 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 STIM2Q9P246 746 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 CNGA1P29973 690 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 KIF22Q14807 665 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 CBWD2Q8IUF1 395 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 CCDC60Q8IWA6 550 aaPredicted RBP23.33■■□□□ 1.33
CLN6-224ENST00000638076 SELENOOQ9BVL4 669 aa23.33■■□□□ 1.33
CLN6-224ENST00000638076 TULP1O00294 542 aaPredicted RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 TNFAIP3P21580 790 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 MXI1P50539 228 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 ACTR2P61160 394 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 SNRNP35Q16560 246 aaKnown RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 GNPTABQ3T906 1256 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 LMBR1Q8WVP7 490 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 CCDC102AQ96A19 550 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 HVCN1Q96D96 273 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 SAAL1Q96ER3 474 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 TMEM117Q9H0C3 514 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms