RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TRAPPC3LQ5T215 181 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 ARHGAP31Q2M1Z3 1444 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 CYTH3O43739 400 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 ZNF18P17022 549 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 KRT28Q7Z3Y7 464 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 GJA10Q969M2 543 aa20.48■□□□□ 0.87
CACNA1A-257ENST00000638009 PGM1P36871 562 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 ARFIP2P53365 341 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 PHKG1Q16816 387 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 ASPRV1Q53RT3 343 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 DDIASQ8IXT1 998 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 PACSIN1Q9BY11 444 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 NRBP1Q9UHY1 535 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 M0R2C6 588 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 BBS9Q3SYG4 887 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 NIM1KQ8IY84 436 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 STAMQ92783 540 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 KIFC1Q9BW19 673 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 KCNA3P22001 575 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 TFAMQ00059 246 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 LMBRD1Q9NUN5 540 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 PDZK1P1A8MUH7 402 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 IL6P05231 212 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 AKAP5P24588 427 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 MRPS25P82663 173 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 ANKRD49Q8WVL7 239 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 DCAF5Q96JK2 942 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 TFCP2L1Q9NZI6 479 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 EMILIN1Q9Y6C2 1016 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 KIF24Q5T7B8 1368 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 PDE8AO60658 829 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 ZBED6P86452 979 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 PPP1R14AQ96A00 147 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 KMT5AQ9NQR1 393 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 ADGRA3Q8IWK6 1321 aa20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 SMG5Q9UPR3 1016 aaKnown RBP20.47■□□□□ 0.87
CACNA1A-257ENST00000638009 PPP6R2O75170 966 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 PTGDRQ13258 359 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 MAPRE1Q15691 268 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 OMA1Q96E52 524 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 ASNSD1Q9NWL6 643 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 PDP2Q9P2J9 529 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 PRAMEP78395 509 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 TFDP2Q14188 446 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 ZNF658Q5TYW1 1059 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 RPRD2Q5VT52 1461 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 SH3TC1Q8TE82 1336 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 KIAA1024Q9UPX6 916 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 EYA2O00167 538 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 HOXB7P09629 217 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 P3H2Q8IVL5 708 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 SAYSD1Q9NPB0 183 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 RRAGDQ9NQL2 400 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 INTS13Q9NVM9 706 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 NMRK1Q9NWW6 199 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 C6orf203Q9P0P8 240 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 ASXL3Q9C0F0 2248 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 PDE9AO76083 593 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 JAK1P23458 1154 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 IL2RBP14784 551 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 OLFML2BQ68BL8 750 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 ARMT1Q9H993 441 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 SERPINB3P29508 390 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 FBXO11Q86XK2 927 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 SLC39A2Q9NP94 309 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 SERTAD1Q9UHV2 236 aa20.46■□□□□ 0.87
CACNA1A-257ENST00000638009 AP5M1Q9H0R1 490 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 THAP9Q9H5L6 903 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 PCDHA13Q9Y5I0 950 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 H0YIN7 160 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 CCND1P24385 295 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 SYCP2LQ5T4T6 812 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 EFL1Q7Z2Z2 1120 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 PROM2Q8N271 834 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 SPATA5Q8NB90 893 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 ANKRD27Q96NW4 1050 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 RPF1Q9H9Y2 349 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 DNALI1O14645 258 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 RIMBP2O15034 1052 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 RGS20O76081 388 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 PNMA6AP0CW24 399 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 ITGA6P23229 1130 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 USP39Q53GS9 565 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 RABGAP1LQ5R372 815 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 PRR23AA6NEV1 266 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 LDHAP00338 332 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 FNDC3AQ9Y2H6 1198 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 PNMA8CA0A1B0GUJ8 204 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 SNPHO15079 494 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 KITP10721 976 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 BRAFP15056 766 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 MICU2Q8IYU8 434 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 AGGF1Q8N302 714 aaeCLIP20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 DPP10Q8N608 796 aa20.45■□□□□ 0.86
CACNA1A-257ENST00000638009 PI4K2BQ8TCG2 481 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms