RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	PPM1A	P35813	382 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NUCB2	P80303	420 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ITIH3	Q06033	890 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	DSC3	Q14574	896 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	LETM2	Q2VYF4	491 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981		Q4G0T1	1027 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PRR16	Q569H4	304 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ABHD15	Q6UXT9	468 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PLA2G4D	Q86XP0	818 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CKAP2L	Q8IYA6	745 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ABI1	Q8IZP0	508 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	LRRC43	Q8N309	656 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	METTL13	Q8N6R0	699 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TMEM105	Q8N8V8	129 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NECTIN4	Q96NY8	510 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ADAM7	Q9H2U9	754 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SMOC2	Q9H3U7	446 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ATP6V1D	Q9Y5K8	247 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	HCFC2	Q9Y5Z7	792 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MYH9	P35579	1960 aa	Known RBP	10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	EVPL	Q92817	2033 aa		10.6	□□□□□ -0.71
CACNA1A-256	ENST00000637981	PRR23A	A6NEV1	266 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	C2orf71	A6NGG8	1288 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TBX3	O15119	743 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	C22orf31	O95567	290 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	BMP15	O95972	392 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ASGR2	P07307	311 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZSCAN22	P10073	491 aa	Predicted RBP	10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZSCAN20	P17040	1043 aa	Predicted RBP	10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CA8	P35219	290 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	NBL1	P41271	181 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SMC1A	Q14683	1233 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SWSAP1	Q6NVH7	229 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MIS18BP1	Q6P0N0	1132 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SLFN12	Q8IYM2	578 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MRPL43	Q8N983	215 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FAM20A	Q96MK3	541 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MFSD1	Q9H3U5	465 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TBC1D22B	Q9NU19	505 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	RNF19A	Q9NV58	838 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	SPG21	Q9NZD8	308 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	DDX25	Q9UHL0	483 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MTMR6	Q9Y217	621 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MYO15A	Q9UKN7	3530 aa		10.59	□□□□□ -0.71
CACNA1A-256	ENST00000637981	IGLV3-22	A0A075B6J6	115 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FAM86B1	E9PN63	330 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	LAD1	O00515	517 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	WEE2	P0C1S8	567 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	FAM86B2	P0C5J1	330 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ATP4A	P20648	1035 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MTHFR	P42898	656 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TTC38	Q5R3I4	469 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	RARS2	Q5T160	578 aa	Known RBP	10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ASTL	Q6HA08	431 aa	Predicted RBP	10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ECHDC2	Q86YB7	292 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	TDRD5	Q8NAT2	981 aa	Known RBP	10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	RNF169	Q8NCN4	708 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	BBX	Q8WY36	941 aa	Predicted RBP	10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	MBOAT7	Q96N66	472 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZNF396	Q96N95	335 aa	Predicted RBP	10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	IPO9	Q96P70	1041 aa	Known RBP	10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	ZNF577	Q9BSK1	485 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	LIMD1	Q9UGP4	676 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	CEP131	Q9UPN4	1083 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	AKT3	Q9Y243	479 aa		10.58	□□□□□ -0.71
CACNA1A-256	ENST00000637981	IPO5	O00410	1097 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	DHX15	O43143	795 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	NEMF	O60524	1076 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	CLASP2	O75122	1294 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	ATP2B1	P20020	1258 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	CLCN3	P51790	818 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	NLRP11	P59045	1033 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	BMS1	Q14692	1282 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	EARS2	Q5JPH6	523 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	CLLU1OS	Q5K130	101 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	ATL3	Q6DD88	541 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	FRMD5	Q7Z6J6	570 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	FERMT3	Q86UX7	667 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	SLC39A11	Q8N1S5	342 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	C12orf76	Q8N812	135 aa	Predicted RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	MAP7D2	Q96T17	732 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	RIT2	Q99578	217 aa		10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	DBR1	Q9UK59	544 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.58	□□□□□ -0.72
CACNA1A-256	ENST00000637981	FAM205C	A6NFA0	338 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	NT5C1B-RDH14	C9J2C7	533 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	MAGEB2	O15479	319 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	EDIL3	O43854	480 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	GAS7	O60861	476 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	TDP2	O95551	362 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	CXCL14	O95715	111 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	F13A1	P00488	732 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	EIF4B	P23588	611 aa	Known RBP	10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	TMOD1	P28289	359 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	MCM7	P33993	719 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	ALDH7A1	P49419	539 aa	Known RBP	10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	CLCN5	P51795	746 aa		10.57	□□□□□ -0.72
CACNA1A-256	ENST00000637981	REST	Q13127	1097 aa		10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms