RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 NLRP4Q96MN2 994 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 LRFN3Q9BTN0 628 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 S1PR5Q9H228 398 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 CXCL16Q9H2A7 254 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 RNF39Q9H2S5 420 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 NRDE2Q9H7Z3 1164 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 AGPAT5Q9NUQ2 364 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 MIOSQ9NXC5 875 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 LRFN2Q9ULH4 789 aa8.77□□□□□ -1.01
PNKP-229ENST00000637897 BARX2Q9UMQ3 279 aaPredicted RBP8.77□□□□□ -1.01
PNKP-229ENST00000637897 ZNF623O75123 536 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 DDHD2O94830 711 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 EFEMP2O95967 443 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 PTMSP20962 102 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 GLRA2P23416 452 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 RARRES1P49788 294 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 NUCB2P80303 420 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 EMC2Q15006 297 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 SYCE2Q6PIF2 218 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 FAM43BQ6ZT52 329 aaPredicted RBP8.76□□□□□ -1.01
PNKP-229ENST00000637897 MRPL10Q7Z7H8 261 aaKnown RBP8.76□□□□□ -1.01
PNKP-229ENST00000637897 ZNF410Q86VK4 478 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 ZNF280BQ86YH2 543 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 SMRP1Q8NCR6 262 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 GSTCDQ8NEC7 633 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 PIGOQ8TEQ8 1089 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 BSNDQ8WZ55 320 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 SUSD6Q92537 303 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 MRPS27Q92552 414 aaKnown RBP8.76□□□□□ -1.01
PNKP-229ENST00000637897 INTS4Q96HW7 963 aaKnown RBP8.76□□□□□ -1.01
PNKP-229ENST00000637897 GBP4Q96PP9 640 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 EIF2AQ9BY44 585 aaKnown RBP8.76□□□□□ -1.01
PNKP-229ENST00000637897 GCOM2Q9BZD3 368 aaPredicted RBP8.76□□□□□ -1.01
PNKP-229ENST00000637897 TTC12Q9H892 705 aaPredicted RBP8.76□□□□□ -1.01
PNKP-229ENST00000637897 GPRC5CQ9NQ84 441 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 TLR9Q9NR96 1032 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 FAM105AQ9NUU6 356 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 DNAJB4Q9UDY4 337 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 LIMCH1Q9UPQ0 1083 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 COL4A3BPQ9Y5P4 624 aa8.76□□□□□ -1.01
PNKP-229ENST00000637897 ZNF318Q5VUA4 2279 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 F8W810 466 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 TSPAN1O60635 241 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 LILRB3O75022 631 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 EOMESO95936 686 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 GALTP07902 379 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 SRGAP2CP0DJJ0 459 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 TXKP42681 527 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 BCAR1P56945 870 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 PTENP60484 403 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 UBE3AQ05086 875 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 MBTD1Q05BQ5 628 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 COASYQ13057 564 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 SMAD4Q13485 552 aaKnown RBP8.75□□□□□ -1.01
PNKP-229ENST00000637897 CUL4AQ13619 759 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 CAPSQ13938 189 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 ZNF174Q15697 407 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 CALCRLQ16602 461 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 XKR9Q5GH70 373 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 PLPP4Q5VZY2 271 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 KANK3Q6NY19 840 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 TMEM184AQ6ZMB5 413 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 EP400NLQ6ZTU2 488 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 CATSPER3Q86XQ3 398 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 IFNLR1Q8IU57 520 aaPredicted RBP8.75□□□□□ -1.01
PNKP-229ENST00000637897 TPH2Q8IWU9 490 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 ZNF710Q8N1W2 664 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 RNF149Q8NC42 400 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 RNF169Q8NCN4 708 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 FBXO18Q8NFZ0 1043 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 AUTS2Q8WXX7 1259 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 TMX3Q96JJ7 454 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 ZSWIM4Q9H7M6 989 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 POLD4Q9HCU8 107 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 CHST12Q9NRB3 414 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 TBC1D13Q9NVG8 400 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 TCEAL9Q9UHQ7 104 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 PCDHA12Q9UN75 941 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 PIN4Q9Y237 131 aaKnown RBP8.75□□□□□ -1.01
PNKP-229ENST00000637897 LZTS1Q9Y250 596 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 USP20Q9Y2K6 914 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 HES2Q9Y543 173 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 PCDHB2Q9Y5E7 798 aa8.75□□□□□ -1.01
PNKP-229ENST00000637897 MUC6Q6W4X9 2439 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 C2orf71A6NGG8 1288 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 LOC730098B7Z3J9 87 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 B4GALT5O43286 388 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 NEMFO60524 1076 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 GPR37L1O60883 481 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 ZSCAN20P17040 1043 aaPredicted RBP8.74□□□□□ -1.01
PNKP-229ENST00000637897 XBP1P17861 261 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 LAG3P18627 525 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 ATP2B1P20020 1258 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 IGFBP6P24592 240 aaPredicted RBP8.74□□□□□ -1.01
PNKP-229ENST00000637897 MCM4P33991 863 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 MCM7P33993 719 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 RFC5P40937 340 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 SLC11A1P49279 550 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 ODR4Q5SWX8 454 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 CLEC17AQ6ZS10 378 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms