RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 GPC6Q9Y625 555 aaPredicted RBP9.88□□□□□ -0.83
USB1-216ENST00000624720 TLL2Q9Y6L7 1015 aa9.88□□□□□ -0.83
USB1-216ENST00000624720 TJP1Q07157 1748 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 E7EWF7 191 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 GOLGA8MH3BSY2 632 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 DNM1LO00429 736 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 FIBPO43427 364 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 PRC1O43663 620 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 RNGTTO60942 597 aaKnown RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 SERPINB7O75635 380 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 ITGA2BP08514 1039 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 MMP10P09238 476 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 IDEP14735 1019 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 KRT4P19013 534 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 MAP3K12Q12852 859 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 INSCQ1MX18 579 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 CAVIN4Q5BKX8 364 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 OLFML2BQ68BL8 750 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 VASH1Q7L8A9 365 aaPredicted RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 LSMEM1Q8N8F7 131 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 FAM133AQ8N9E0 248 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 FOXP3Q9BZS1 431 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.87□□□□□ -0.83
USB1-216ENST00000624720 ANKZF1Q9H8Y5 726 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 CBX8Q9HC52 389 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 C12orf4Q9NQ89 552 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 GJB4Q9NTQ9 266 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 HACD3Q9P035 362 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 CTNNAL1Q9UBT7 734 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 USH1CQ9Y6N9 552 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 B4E1Z4 1266 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 BHMG1C9JSJ3 638 aaPredicted RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 CPLX1O14810 134 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 FOXP2O15409 715 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 MAP3K6O95382 1288 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 FGFR2P21802 821 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 RPS6KB1P23443 525 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 BLVRAP53004 296 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 ST3GAL1Q11201 340 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 PPP2R5CQ13362 524 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 LSAMPQ13449 338 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 DIXDC1Q155Q3 683 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 GRIK5Q16478 980 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 WDR44Q5JSH3 913 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 SNX30Q5VWJ9 437 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 RFPL4BQ6ZWI9 263 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 NOA1Q8NC60 698 aaKnown RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 NCSTNQ92542 709 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 FAM84BQ96KN1 310 aaPredicted RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 SH3GL2Q99962 352 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 TTPALQ9BTX7 342 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 FHDC1Q9C0D6 1143 aaPredicted RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 SCPEP1Q9HB40 452 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 HSFX1Q9UBD0 423 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 MTRF1LQ9UGC7 380 aaKnown RBP9.87□□□□□ -0.83
USB1-216ENST00000624720 IVNS1ABPQ9Y6Y0 642 aa9.87□□□□□ -0.83
USB1-216ENST00000624720 TNS1Q9HBL0 1735 aaKnown RBP9.86□□□□□ -0.83
USB1-216ENST00000624720 UFL1O94874 794 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 ALAS1P13196 640 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 PCK1P35558 622 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 SCTRP47872 440 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 CCNG1P51959 295 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 THOP1P52888 689 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 TUBB4BP68371 445 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 HPCAP84074 193 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 TOB2Q14106 344 aaPredicted RBP9.86□□□□□ -0.83
USB1-216ENST00000624720 NDUFA5Q16718 116 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 ANKRD20A8PQ5CZ79 823 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 METTL11BQ5VVY1 283 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 KIAA1614Q5VZ46 1190 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 C6orf89Q6UWU4 347 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 CMTR1Q8N1G2 835 aaKnown RBP9.86□□□□□ -0.83
USB1-216ENST00000624720 CARNMT1Q8N4J0 409 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 MED30Q96HR3 178 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 TBCBQ99426 244 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 SLF1Q9BQI6 1058 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 NYXQ9GZU5 481 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 PLEKHA5Q9HAU0 1116 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 HPS4Q9NQG7 708 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 NUP188Q5SRE5 1749 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 FAM47E-STBD1D6RA91 191 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 ZNF213O14771 459 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 CETN3O15182 167 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 KMOO15229 486 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 ASLP04424 464 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 S100A6P06703 90 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 CCND1P24385 295 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 PSMA5P28066 241 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 HNF1BP35680 557 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 PLTPP55058 493 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 MARSP56192 900 aaKnown RBP9.86□□□□□ -0.83
USB1-216ENST00000624720 CHMP4BP1P59074 171 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 HSPA14Q0VDF9 509 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 PPP1R7Q15435 360 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 CYTH1Q15438 398 aa9.86□□□□□ -0.83
USB1-216ENST00000624720 RASIP1Q5U651 963 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms