RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 KCNA1Q09470 495 aa15.05■□□□□ 0
AGRN-210ENST00000620552 EDEM3Q9BZQ6 932 aa15.05■□□□□ 0
AGRN-210ENST00000620552 INTUQ9ULD6 942 aa15.05■□□□□ 0
AGRN-210ENST00000620552 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.05■□□□□ 0
AGRN-210ENST00000620552 PPFIA2O75334 1257 aa15.05■□□□□ 0
AGRN-210ENST00000620552 GPC5P78333 572 aa15.05■□□□□ 0
AGRN-210ENST00000620552 KCNH2Q12809 1159 aa15.05■□□□□ 0
AGRN-210ENST00000620552 SPATS2Q86XZ4 545 aaKnown RBP15.05■□□□□ 0
AGRN-210ENST00000620552 CXorf38Q8TB03 319 aa15.05■□□□□ 0
AGRN-210ENST00000620552 ACAP3Q96P50 834 aa15.05■□□□□ 0
AGRN-210ENST00000620552 PSMC1P62191 440 aaKnown RBP15.05■□□□□ -0
AGRN-210ENST00000620552 SCARF1Q14162 830 aa15.05■□□□□ -0
AGRN-210ENST00000620552 SYNDIG1LA6NDD5 238 aa15.05■□□□□ -0
AGRN-210ENST00000620552 COPB2P35606 906 aa15.05■□□□□ -0
AGRN-210ENST00000620552 RBBP7Q16576 425 aa15.05■□□□□ -0
AGRN-210ENST00000620552 CEP72Q9P209 647 aa15.05■□□□□ -0
AGRN-210ENST00000620552 HSPA4LO95757 839 aa15.05■□□□□ -0
AGRN-210ENST00000620552 RALAP11233 206 aa15.05■□□□□ -0
AGRN-210ENST00000620552 CAPRIN1Q14444 709 aaKnown RBP15.05■□□□□ -0
AGRN-210ENST00000620552 SMAD1Q15797 465 aaKnown RBP15.05■□□□□ -0
AGRN-210ENST00000620552 ATG16L1Q676U5 607 aa15.05■□□□□ -0
AGRN-210ENST00000620552 TADA2AO75478 443 aa15.05■□□□□ -0
AGRN-210ENST00000620552 TAF1CQ15572 869 aaPredicted RBP15.05■□□□□ -0
AGRN-210ENST00000620552 SPATA2LQ8IUW3 424 aaPredicted RBP15.05■□□□□ -0
AGRN-210ENST00000620552 RBM41Q96IZ5 413 aaKnown RBP15.05■□□□□ -0
AGRN-210ENST00000620552 SYNDIG1Q9H7V2 258 aa15.05■□□□□ -0
AGRN-210ENST00000620552 STK36Q9NRP7 1315 aa15.05■□□□□ -0
AGRN-210ENST00000620552 MRPS25P82663 173 aaKnown RBP15.04■□□□□ -0
AGRN-210ENST00000620552 FOXO4P98177 505 aa15.04■□□□□ -0
AGRN-210ENST00000620552 VPS39Q96JC1 886 aa15.04■□□□□ -0
AGRN-210ENST00000620552 NPHP3-ACAD11A0A0J9YXS1 232 aa15.04■□□□□ -0
AGRN-210ENST00000620552 LIG3P49916 1009 aa15.04■□□□□ -0
AGRN-210ENST00000620552 TMEM62Q0P6H9 643 aa15.04■□□□□ -0
AGRN-210ENST00000620552 MXD3Q9BW11 206 aa15.04■□□□□ -0
AGRN-210ENST00000620552 SCAF8Q9UPN6 1271 aaKnown RBP15.04■□□□□ -0
AGRN-210ENST00000620552 CPSF1Q10570 1443 aaKnown RBP15.04■□□□□ -0
AGRN-210ENST00000620552 KITP10721 976 aa15.04■□□□□ -0
AGRN-210ENST00000620552 CC2D1AQ6P1N0 951 aaPredicted RBP15.04■□□□□ -0
AGRN-210ENST00000620552 LDHDQ86WU2 507 aa15.04■□□□□ -0
AGRN-210ENST00000620552 GPD1LQ8N335 351 aa15.04■□□□□ -0
AGRN-210ENST00000620552 PBXIP1Q96AQ6 731 aa15.04■□□□□ -0
AGRN-210ENST00000620552 SPON2Q9BUD6 331 aa15.04■□□□□ -0
AGRN-210ENST00000620552 ZNRF3Q9ULT6 936 aa15.04■□□□□ -0
AGRN-210ENST00000620552 RASGRF2O14827 1237 aa15.04■□□□□ -0
AGRN-210ENST00000620552 DNAJC6O75061 913 aa15.04■□□□□ -0
AGRN-210ENST00000620552 CTSHP09668 335 aa15.04■□□□□ -0
AGRN-210ENST00000620552 PROM2Q8N271 834 aa15.04■□□□□ -0
AGRN-210ENST00000620552 APOEP02649 317 aa15.04■□□□□ -0
AGRN-210ENST00000620552 AKR1B1P15121 316 aa15.04■□□□□ -0
AGRN-210ENST00000620552 SNAPC2Q13487 334 aa15.04■□□□□ -0
AGRN-210ENST00000620552 STAG2Q8N3U4 1231 aa15.04■□□□□ -0
AGRN-210ENST00000620552 NEK9Q8TD19 979 aa15.04■□□□□ -0
AGRN-210ENST00000620552 RNF17Q9BXT8 1623 aaKnown RBP15.04■□□□□ -0
AGRN-210ENST00000620552 PRR29P0C7W0 189 aa15.04■□□□□ -0
AGRN-210ENST00000620552 CA4P22748 312 aa15.04■□□□□ -0
AGRN-210ENST00000620552 NT5C2P49902 561 aa15.04■□□□□ -0
AGRN-210ENST00000620552 HDLBPQ00341 1268 aaKnown RBP15.04■□□□□ -0
AGRN-210ENST00000620552 BTBD8Q5XKL5 378 aa15.04■□□□□ -0
AGRN-210ENST00000620552 FAM84BQ96KN1 310 aaPredicted RBP15.04■□□□□ -0
AGRN-210ENST00000620552 CCDC138Q96M89 665 aa15.04■□□□□ -0
AGRN-210ENST00000620552 AGO2Q9UKV8 859 aaKnown RBP15.04■□□□□ -0
AGRN-210ENST00000620552 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.04■□□□□ -0
AGRN-210ENST00000620552 CTNND1O60716 968 aaKnown RBP15.03■□□□□ -0
AGRN-210ENST00000620552 TRMT10CQ7L0Y3 403 aaKnown RBP15.03■□□□□ -0
AGRN-210ENST00000620552 RNF149Q8NC42 400 aa15.03■□□□□ -0
AGRN-210ENST00000620552 WHAMMQ8TF30 809 aa15.03■□□□□ -0
AGRN-210ENST00000620552 CYP26B1Q9NR63 512 aa15.03■□□□□ -0
AGRN-210ENST00000620552 NDFIP2Q9NV92 336 aa15.03■□□□□ -0
AGRN-210ENST00000620552 GTSE1Q9NYZ3 720 aa15.03■□□□□ -0
AGRN-210ENST00000620552 MID2Q9UJV3 735 aa15.03■□□□□ -0
AGRN-210ENST00000620552 PPP1R9AQ9ULJ8 1098 aa15.03■□□□□ -0
AGRN-210ENST00000620552 TTC7AQ9ULT0 858 aaPredicted RBP15.03■□□□□ -0
AGRN-210ENST00000620552 ADGRB3O60242 1522 aa15.03■□□□□ -0
AGRN-210ENST00000620552 ANP32DO95626 131 aa15.03■□□□□ -0
AGRN-210ENST00000620552 NCLNQ969V3 563 aa15.03■□□□□ -0
AGRN-210ENST00000620552 ZBTB18Q99592 522 aa15.03■□□□□ -0
AGRN-210ENST00000620552 C11orf70Q9BRQ4 267 aa15.03■□□□□ -0
AGRN-210ENST00000620552 ZFYVE28Q9HCC9 887 aa15.03■□□□□ -0
AGRN-210ENST00000620552 NOVA2Q9UNW9 492 aaKnown RBP15.03■□□□□ -0
AGRN-210ENST00000620552 H3BRJ5 948 aa15.03■□□□□ -0
AGRN-210ENST00000620552 CDC27P30260 824 aa15.03■□□□□ -0
AGRN-210ENST00000620552 ARHGDIAP52565 204 aa15.03■□□□□ -0
AGRN-210ENST00000620552 SNCBQ16143 134 aa15.03■□□□□ -0
AGRN-210ENST00000620552 KCNV1Q6PIU1 500 aa15.03■□□□□ -0
AGRN-210ENST00000620552 RNF135Q8IUD6 432 aa15.03■□□□□ -0
AGRN-210ENST00000620552 CRLF3Q8IUI8 442 aa15.03■□□□□ -0
AGRN-210ENST00000620552 TRIM59Q8IWR1 403 aa15.03■□□□□ -0
AGRN-210ENST00000620552 ZRANB2O95218 330 aaKnown RBP eCLIP15.03■□□□□ -08e-7■■■■□ 22.3
AGRN-210ENST00000620552 GLE1Q53GS7 698 aaKnown RBP15.03■□□□□ -0
AGRN-210ENST00000620552 PRAMEF18Q5VWM3 479 aa15.03■□□□□ -0
AGRN-210ENST00000620552 TAS2R42Q7RTR8 314 aa15.03■□□□□ -0
AGRN-210ENST00000620552 TTC17Q96AE7 1141 aa15.03■□□□□ -0
AGRN-210ENST00000620552 SH3KBP1Q96B97 665 aa15.03■□□□□ -0
AGRN-210ENST00000620552 EFHD1Q9BUP0 239 aa15.03■□□□□ -0
AGRN-210ENST00000620552 TJP2Q9UDY2 1190 aa15.03■□□□□ -0
AGRN-210ENST00000620552 HNRNPCL2B2RXH8 293 aa15.03■□□□□ -0
AGRN-210ENST00000620552 HNRNPCL1O60812 293 aaKnown RBP15.03■□□□□ -0
AGRN-210ENST00000620552 TDP2O95551 362 aa15.03■□□□□ -0
AGRN-210ENST00000620552 SDC4P31431 198 aa15.03■□□□□ -0
AGRN-210ENST00000620552 FAM102AQ5T9C2 384 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms