RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 EMC2Q15006 297 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 SNX17Q15036 470 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 VWA3BQ502W6 1294 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 USP37Q86T82 979 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 PPTC7Q8NI37 304 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 ARMCX3Q9UH62 379 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 NRBP1Q9UHY1 535 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 TRPC6Q9Y210 931 aa18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.39■□□□□ 0.53
TRAPPC3-210ENST00000617904 LTBP2Q14767 1821 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 PPFIA4O75335 1185 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 ADCYAP1R1P41586 468 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 DUSP28Q4G0W2 176 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 ZNF484Q5JVG2 852 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 TAPT1Q6NXT6 567 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 LRRC55Q6ZSA7 311 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 IRF2BP1Q8IU81 584 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 ZC3H3Q8IXZ2 948 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 ATP8B4Q8TF62 1192 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 NAA15Q9BXJ9 866 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
TRAPPC3-210ENST00000617904 ARIH2O95376 493 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 KRT13P13646 458 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 NAMPTP43490 491 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 CASP5P51878 434 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 GTF2BQ00403 316 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 MXD4Q14582 209 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 TRIM60Q495X7 471 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 IER5Q5VY09 327 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 APTXQ7Z2E3 356 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 DAW1Q8N136 415 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 OR6J1Q8NGC5 347 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 DEPTORQ8TB45 409 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 NTPCRQ9BSD7 190 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 POLR3FQ9H1D9 316 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 ZNHIT6Q9NWK9 470 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 PRKAG2Q9UGJ0 569 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 STXBP5LQ9Y2K9 1186 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 PLXNA1Q9UIW2 1896 aa18.37■□□□□ 0.53
TRAPPC3-210ENST00000617904 KIAA0391O15091 583 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 STBD1O95210 358 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 SKILP12757 684 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 TNFAIP2Q03169 654 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 TFDP1Q14186 410 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 HSDL1Q3SXM5 330 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 C1orf53Q5VUE5 145 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 SLC9A9Q8IVB4 645 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 GLIS3Q8NEA6 775 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 DHX33Q9H6R0 707 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 PHF24Q9UPV7 400 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 COL6A3P12111 3177 aa18.36■□□□□ 0.53
TRAPPC3-210ENST00000617904 COL1A2P08123 1366 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 DNAH12Q6ZR08 3092 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 SLC16A4O15374 487 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 MAGEB2O15479 319 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 ASAP2O43150 1006 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 EXOC3O60645 756 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 MAFO75444 373 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 SNAI1O95863 264 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 ZNF865P0CJ78 1059 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 NPTX2P47972 431 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 EFNA5P52803 228 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 ARHGAP1Q07960 439 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 CETN1Q12798 172 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 DGKDQ16760 1214 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 ZC2HC1CQ53FD0 456 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 C12orf56Q8IXR9 622 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 FAM186BQ8IYM0 893 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 BICD1Q96G01 975 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 PANX2Q96RD6 677 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 ERGIC2Q96RQ1 377 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 AP5M1Q9H0R1 490 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 C2orf40Q9H1Z8 148 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 BCAS3Q9H6U6 928 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 PDLIM7Q9NR12 457 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 PDGFCQ9NRA1 345 aa18.35■□□□□ 0.53
TRAPPC3-210ENST00000617904 DENND3A2RUS2 1198 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 TEX33O43247 280 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 STX10O60499 249 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 PPP1R37O75864 691 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 RARBP10826 455 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 TMOD1P28289 359 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 KCNJ6P48051 423 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 TBX2Q13207 712 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 FIGNQ5HY92 759 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 FAM109BQ6ICB4 259 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 ARMCX5Q6P1M9 558 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 ZBTB8OSQ8IWT0 167 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 TMEM174Q8WUU8 243 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 PSPC1Q8WXF1 523 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 STRA6Q9BX79 667 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 FGFBP2Q9BYJ0 223 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 NUCKS1Q9H1E3 243 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 KIAA1586Q9HCI6 787 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms