RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 HS2ST1Q7LGA3 356 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 PLPPR4Q7Z2D5 763 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 HAUS6Q7Z4H7 955 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 FRMD5Q7Z6J6 570 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 MSL3Q8N5Y2 521 aaKnown RBP9.79□□□□□ -0.84
CCDC47-207ENST00000612558 TC2NQ8N9U0 490 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 MAML3Q96JK9 1138 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 FAM167AQ96KS9 214 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 SPATA33Q96N06 139 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 PANX2Q96RD6 677 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 ERGIC2Q96RQ1 377 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 NTPCRQ9BSD7 190 aaKnown RBP9.79□□□□□ -0.84
CCDC47-207ENST00000612558 NUP58Q9BVL2 599 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 TMX1Q9H3N1 280 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 NDST4Q9H3R1 872 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 ZFYVE28Q9HCC9 887 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 GPRC5CQ9NQ84 441 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 PDGFCQ9NRA1 345 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 AAASQ9NRG9 546 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 FAM184BQ9ULE4 1060 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 ABT1Q9ULW3 272 aaKnown RBP9.79□□□□□ -0.84
CCDC47-207ENST00000612558 PPME1Q9Y570 386 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 DOCK3Q8IZD9 2030 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 ZMYM2Q9UBW7 1377 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 TMEM88BA6NKF7 163 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 SLC16A3O15427 465 aaKnown RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 SNAI1O95863 264 aaPredicted RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 GYPCP04921 128 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 RFC5P40937 340 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 TM4SF4P48230 202 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 SLC26A2P50443 739 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 POLGP54098 1239 aaPredicted RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 NCKAP1LP55160 1127 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 ADKP55263 362 aaKnown RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 LAMC2Q13753 1193 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 MYBPC2Q14324 1141 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 NOLC1Q14978 699 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 CEP135Q66GS9 1140 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 TREML4Q6UXN2 200 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 CNGA4Q8IV77 575 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 TRIM59Q8IWR1 403 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 SYCP3Q8IZU3 236 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 RETREG2Q8NC44 543 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 CPLX3Q8WVH0 158 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 GLG1Q92896 1179 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 IQCDQ96DY2 449 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 CCDC51Q96ER9 411 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 ACCSQ96QU6 501 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 TINF2Q9BSI4 451 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 KATNBL1Q9H079 304 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 ABHD16BQ9H3Z7 469 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 XPNPEP1Q9NQW7 623 aa9.78□□□□□ -0.84
CCDC47-207ENST00000612558 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
CCDC47-207ENST00000612558 ARID2Q68CP9 1835 aa9.77□□□□□ -0.84
CCDC47-207ENST00000612558 CCDC169A6NNP5 214 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 NKRFO15226 690 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCDC47-207ENST00000612558 CLIC2O15247 247 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 SLC16A4O15374 487 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 STX10O60499 249 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 MFAP3LO75121 409 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 GH1P01241 217 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 EPB41P11171 864 aaKnown RBP9.77□□□□□ -0.85
CCDC47-207ENST00000612558 CASP14P31944 242 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 ABCD1P33897 745 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 NPTX2P47972 431 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 KCNJ6P48051 423 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 PPP2R3AQ06190 1150 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 MAP2K5Q13163 448 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 EMC2Q15006 297 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 SYCP1Q15431 976 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 TARBP2Q15633 366 aaKnown RBP9.77□□□□□ -0.85
CCDC47-207ENST00000612558 MORN1Q5T089 497 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 SLC9A9Q8IVB4 645 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 KSR1Q8IVT5 923 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 TMEM161BQ8NDZ6 487 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 TMEM174Q8WUU8 243 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 SLC7A3Q8WY07 619 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 COPS5Q92905 334 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 HVCN1Q96D96 273 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 IFT74Q96LB3 600 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 CEP89Q96ST8 783 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 BAG1Q99933 345 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-207ENST00000612558 MKNK1Q9BUB5 465 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 SMARCAD1Q9H4L7 1026 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 KMT5AQ9NQR1 393 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 AGPAT3Q9NRZ7 376 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 SPTLC3Q9NUV7 552 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 DMAC2Q9NW81 257 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 ARMCX3Q9UH62 379 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-207ENST00000612558 EXOC7Q9UPT5 735 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCDC47-207ENST00000612558 EMSYQ7Z589 1322 aa9.77□□□□□ -0.85
CCDC47-207ENST00000612558 H0YCG3 227 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms