RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 SCFD2Q8WU76 684 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 GTF3C6Q969F1 213 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 IWS1Q96ST2 819 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
SH3D19-212ENST00000604440 SRA1Q9HD15 236 aaKnown RBP10.04□□□□□ -0.8
SH3D19-212ENST00000604440 RIC8AQ9NPQ8 531 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 GJB4Q9NTQ9 266 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 TMEM39AQ9NV64 488 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
SH3D19-212ENST00000604440 CXXC1Q9P0U4 656 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-212ENST00000604440 PCDHA6Q9UN73 950 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
SH3D19-212ENST00000604440 GNEQ9Y223 722 aaKnown RBP10.04□□□□□ -0.8
SH3D19-212ENST00000604440 PCDHA8Q9Y5H6 950 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 DOCK5Q9H7D0 1870 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 MROH7Q68CQ1 1323 aa10.04□□□□□ -0.8
SH3D19-212ENST00000604440 LOC102724159A0A0B4J2E5 919 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-212ENST00000604440 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 ALX3O95076 343 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 GHRHP01286 108 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 CDK7P50613 346 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 ACLYP53396 1101 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 NLRP5P59047 1200 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 MRPS9P82933 396 aaKnown RBP10.03□□□□□ -0.8
SH3D19-212ENST00000604440 PPIGQ13427 754 aaKnown RBP eCLIP10.03□□□□□ -0.84e-6■□□□□ 10
SH3D19-212ENST00000604440 TTLL4Q14679 1199 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 SETDB1Q15047 1291 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 PWP2Q15269 919 aaKnown RBP10.03□□□□□ -0.8
SH3D19-212ENST00000604440 KCNA10Q16322 511 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 IQSEC1Q6DN90 963 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 PSRC1Q6PGN9 363 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-212ENST00000604440 Q6ZS46 218 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-212ENST00000604440 PPP1R13LQ8WUF5 828 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 UIMC1Q96RL1 719 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 C1QTNF1Q9BXJ1 281 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 ANO3Q9BYT9 981 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 AP5M1Q9H0R1 490 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 PRDM12Q9H4Q4 367 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 SPC25Q9HBM1 224 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 ORC3Q9UBD5 711 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-212ENST00000604440 LIMCH1Q9UPQ0 1083 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 MRVI1Q9Y6F6 885 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 ELP1O95163 1332 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 MUC6Q6W4X9 2439 aa10.03□□□□□ -0.8
SH3D19-212ENST00000604440 PRRC2BQ5JSZ5 2229 aaKnown RBP10.02□□□□□ -0.81
SH3D19-212ENST00000604440 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.81
SH3D19-212ENST00000604440 DCDC2CA8MYV0 355 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 CTAGE5O15320 804 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 EIF3JO75822 258 aaKnown RBP10.02□□□□□ -0.81
SH3D19-212ENST00000604440 CDKL5O76039 1030 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 DEXIO95424 95 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 GJA9P57773 515 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 CHMP4BP1P59074 171 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 NKX3-2P78367 333 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 RAB30Q15771 203 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 OCLNQ16625 522 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 FSCN1Q16658 493 aaKnown RBP10.02□□□□□ -0.81
SH3D19-212ENST00000604440 SWI5Q1ZZU3 235 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 DUSP28Q4G0W2 176 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 VSIG10LQ86VR7 867 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 KRTAP1-3Q8IUG1 177 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 IL22RA1Q8N6P7 574 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 NSUN7Q8NE18 718 aaKnown RBP10.02□□□□□ -0.81
SH3D19-212ENST00000604440 CCDC148Q8NFR7 591 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 CCDC12Q8WUD4 166 aaPredicted RBP10.02□□□□□ -0.81
SH3D19-212ENST00000604440 PRIMPOLQ96LW4 560 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 MAF1Q9H063 256 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 UPF3AQ9H1J1 476 aaKnown RBP10.02□□□□□ -0.81
SH3D19-212ENST00000604440 BCAS3Q9H6U6 928 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 C6orf50Q9HD87 102 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 STARD7Q9NQZ5 370 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 KCNJ14Q9UNX9 436 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 TANC1Q9C0D5 1861 aa10.02□□□□□ -0.81
SH3D19-212ENST00000604440 MYH7BA7E2Y1 1941 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 GRXCR1A8MXD5 290 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 ASGR1P07306 291 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 MYL3P08590 195 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 UBA1P22314 1058 aaKnown RBP10.01□□□□□ -0.81
SH3D19-212ENST00000604440 PSMC6P62333 389 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 SP2Q02086 613 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 SP4Q02446 784 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 BECN1Q14457 450 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 PCNX4Q63HM2 1172 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 CCDC62Q6P9F0 684 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 CXCL17Q6UXB2 119 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 FAM126BQ8IXS8 530 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 REXO1Q8N1G1 1221 aaKnown RBP10.01□□□□□ -0.81
SH3D19-212ENST00000604440 AFG1LQ8WV93 481 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 HERVK_113Q902F9 699 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 ZMYND12Q9H0C1 365 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 SAP130Q9H0E3 1048 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 DDX41Q9UJV9 622 aaKnown RBP10.01□□□□□ -0.81
SH3D19-212ENST00000604440 TRIM33Q9UPN9 1127 aa10.01□□□□□ -0.81
SH3D19-212ENST00000604440 COL4A4P53420 1690 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 243.3 ms