RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZNF215Q9UL58 517 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-213ENST00000597325 TELO2Q9Y4R8 837 aa13.39□□□□□ -0.27
SHKBP1-213ENST00000597325 USP24Q9UPU5 2620 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 IGKV6D-21A0A0A0MT36 114 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 E9PMD0 336 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 LGR5O75473 907 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 EYA4O95677 639 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 OATP04181 439 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 LGALS2P05162 132 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 PLA2G4BP0C869 781 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 YWHABP31946 246 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 AFMP43652 599 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 SLC26A2P50443 739 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 HTRA4P83105 476 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 BFSP2Q13515 415 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 DHX8Q14562 1220 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 CAMK4Q16566 473 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 ECM1Q16610 540 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 CNKSR3Q6P9H4 555 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 OTUD6AQ7L8S5 288 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 DGLUCYQ7Z3D6 616 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 PIGOQ8TEQ8 1089 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 PAGE5Q96GU1 130 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 BHMT2Q9H2M3 363 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 BLOC1S4Q9NUP1 217 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 SEPT9Q9UHD8 586 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 INSL6Q9Y581 213 aa13.38□□□□□ -0.27
SHKBP1-213ENST00000597325 ABHD14A-ACY1A0A1B0GW23 586 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 A6NJR5 290 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 TBX10O75333 385 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 PPFIA4O75335 1185 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 LETM1O95202 739 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 MYL1P05976 194 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 MYL3P08590 195 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 ZNF286BP0CG31 522 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 HOXD8P13378 290 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 MARK3P27448 753 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 MCM6Q14566 821 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 POSTNQ15063 836 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 NBPF20Q3BBV1 942 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 NAALADL2Q58DX5 795 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 TRMT1LQ7Z2T5 733 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 TRIM50Q86XT4 487 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 ELOA2Q8IYF1 753 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 ANKEF1Q9NU02 776 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 ERAP1Q9NZ08 941 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 MAFBQ9Y5Q3 323 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 MAP1BP46821 2468 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 CEP250Q9BV73 2442 aa13.37□□□□□ -0.27
SHKBP1-213ENST00000597325 MICAL3Q7RTP6 2002 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 RBAK-RBAKDNI3L0D1 243 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 KPNA6O60684 536 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 NBNO60934 754 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 SMC2O95347 1197 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 PDGFBP01127 241 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 HYAL1Q12794 435 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 GPM6BQ13491 265 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 FAM117BQ6P1L5 589 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 GPBP1Q86WP2 473 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 PPP1R13LQ8WUF5 828 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 CCDC47Q96A33 483 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 PCYT2Q99447 389 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 ANP32EQ9BTT0 268 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 NRBP2Q9NSY0 501 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 KBTBD4Q9NVX7 518 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 ARID2Q68CP9 1835 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 NLRC5Q86WI3 1866 aa13.36□□□□□ -0.27
SHKBP1-213ENST00000597325 A0A087WWV3 80 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 ZNF862O60290 1169 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 RARRES1P49788 294 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 ASIC1P78348 528 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 PNOCQ13519 176 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 XKR9Q5GH70 373 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 PLA2G4FQ68DD2 849 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 LRRC15Q8TF66 581 aa13.35□□□□□ -0.27
SHKBP1-213ENST00000597325 STAMQ92783 540 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms