RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 GSDMDP57764 484 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 GJA9P57773 515 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 BEX3Q00994 111 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 GRIK4Q16099 956 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 ZNF296Q8WUU4 475 aaPredicted RBP22.79■■□□□ 1.24
PNKP-203ENST00000593946 ZBTB10Q96DT7 871 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 NDST4Q9H3R1 872 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 SUCLA2Q9P2R7 463 aaPredicted RBP22.79■■□□□ 1.24
PNKP-203ENST00000593946 A0A1W2PQC6 194 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 HAS3O00219 553 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 PES1O00541 588 aaKnown RBP22.78■■□□□ 1.24
PNKP-203ENST00000593946 HMGCRP04035 888 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 EPB41P11171 864 aaKnown RBP22.78■■□□□ 1.24
PNKP-203ENST00000593946 PRKAR2AP13861 404 aaKnown RBP22.78■■□□□ 1.24
PNKP-203ENST00000593946 CLCN3P51790 818 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 KIAA0753Q2KHM9 967 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 MARCH8Q5T0T0 291 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 CEP135Q66GS9 1140 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 CDCA2Q69YH5 1023 aaPredicted RBP22.78■■□□□ 1.24
PNKP-203ENST00000593946 METTL13Q8N6R0 699 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 TMEM134Q9H6X4 195 aa22.78■■□□□ 1.24
PNKP-203ENST00000593946 ARMCX3Q9UH62 379 aaPredicted RBP22.78■■□□□ 1.24
PNKP-203ENST00000593946 PHLPP2Q6ZVD8 1323 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 CNGA1P29973 690 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 PSMC2P35998 433 aaKnown RBP22.77■■□□□ 1.24
PNKP-203ENST00000593946 CYP2J2P51589 502 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 NKX3-2P78367 333 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 MFSD10Q14728 455 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 MAP3K21Q5TCX8 1036 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 MTHFD1LQ6UB35 978 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 BORCS6Q96GS4 357 aa22.77■■□□□ 1.24
PNKP-203ENST00000593946 METTL14Q9HCE5 456 aaKnown RBP22.77■■□□□ 1.24
PNKP-203ENST00000593946 MYADML2A6NDP7 307 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 ANKRD63C9JTQ0 380 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 MYL3P08590 195 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 C6orf222P0C671 652 aaPredicted RBP22.77■■□□□ 1.23
PNKP-203ENST00000593946 SLC39A4Q6P5W5 647 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 RAET1EQ8TD07 263 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 PXYLP1Q8TE99 480 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 CBWD1Q9BRT8 395 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 KCNF1Q9H3M0 494 aa22.77■■□□□ 1.23
PNKP-203ENST00000593946 RRN3P2A6NIE6 340 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 K7ERI5 159 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 ASAP2O43150 1006 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 SMIM10L2AP0DMW4 78 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 SMIM10L2BP0DMW5 78 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 RARBP10826 455 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 CCND3P30281 292 aaPredicted RBP22.76■■□□□ 1.23
PNKP-203ENST00000593946 ADSSP30520 456 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 PSEN2P49810 448 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 EFNA5P52803 228 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 PURAQ00577 322 aaKnown RBP22.76■■□□□ 1.23
PNKP-203ENST00000593946 STRN3Q13033 797 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 ARID5BQ14865 1188 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 ARHGEF6Q15052 776 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 ARMCX5Q6P1M9 558 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 RHPN2Q8IUC4 686 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 FAM186BQ8IYM0 893 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 RNF149Q8NC42 400 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 ERGIC2Q96RQ1 377 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 FRMD4BQ9Y2L6 1034 aa22.76■■□□□ 1.23
PNKP-203ENST00000593946 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.76■■□□□ 1.23
PNKP-203ENST00000593946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.76■■□□□ 1.23
PNKP-203ENST00000593946 NRCAMQ92823 1304 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 HNRNPDLO14979 420 aaKnown RBP22.75■■□□□ 1.23
PNKP-203ENST00000593946 KPNA6O60684 536 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 PIGRP01833 764 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 GJB1P08034 283 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 PPP2R3AQ06190 1150 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 FKBP15Q5T1M5 1219 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 CCDC150Q8NCX0 1101 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 CACTINQ8WUQ7 758 aaKnown RBP22.75■■□□□ 1.23
PNKP-203ENST00000593946 LMBR1Q8WVP7 490 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 ZNF830Q96NB3 372 aaPredicted RBP22.75■■□□□ 1.23
PNKP-203ENST00000593946 KATNAL1Q9BW62 490 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 CCDC113Q9H0I3 377 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 HSPBP1Q9NZL4 362 aa22.75■■□□□ 1.23
PNKP-203ENST00000593946 EXOC3O60645 756 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 SRGAP2CP0DJJ0 459 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 TMOD1P28289 359 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 TFDP1Q14186 410 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 LRRC8AQ8IWT6 810 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 XXYLT1Q8NBI6 393 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 C2orf40Q9H1Z8 148 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 PCIF1Q9H4Z3 704 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 SETD4Q9NVD3 440 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 FRMPD3Q5JV73 1810 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 PGK1P00558 417 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 PRMT2P55345 433 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 GNASQ5JWF2 1037 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 BICD1Q96G01 975 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 SPC25Q9HBM1 224 aa22.74■■□□□ 1.23
PNKP-203ENST00000593946 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.74■■□□□ 1.231e-6■■□□□ 13.1
PNKP-203ENST00000593946 MBLAC1A4D2B0 266 aaPredicted RBP22.73■■□□□ 1.23
PNKP-203ENST00000593946 MAPK13O15264 365 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 ADAMTS4O75173 837 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 GARTP22102 1010 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 MAP2K1Q02750 393 aaPredicted RBP22.73■■□□□ 1.23
PNKP-203ENST00000593946 POU5F1BQ06416 359 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 SYCP1Q15431 976 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms