RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 BRMS1Q9HCU9 246 aa14.16□□□□□ -0.14
RFX1-207ENST00000589937 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
RFX1-207ENST00000589937 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
RFX1-207ENST00000589937 FAM105AQ9NUU6 356 aa14.16□□□□□ -0.14
RFX1-207ENST00000589937 USP15Q9Y4E8 981 aaPredicted RBP14.16□□□□□ -0.14
RFX1-207ENST00000589937 ZNF318Q5VUA4 2279 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 TRIP11Q15643 1979 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 HOXA2O43364 376 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 NCK2O43639 380 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 ZC3H11AO75152 810 aaKnown RBP eCLIP14.15□□□□□ -0.14
RFX1-207ENST00000589937 SLITRK3O94933 977 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 TXKP42681 527 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 BCAR1P56945 870 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 UBE3AQ05086 875 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 UBXN11Q5T124 520 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 SLFN12Q8IYM2 578 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 PIGOQ8TEQ8 1089 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 PSPC1Q8WXF1 523 aaKnown RBP14.15□□□□□ -0.14
RFX1-207ENST00000589937 NAP1L4Q99733 375 aaKnown RBP14.15□□□□□ -0.14
RFX1-207ENST00000589937 GBP3Q9H0R5 595 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 TTC12Q9H892 705 aaPredicted RBP14.15□□□□□ -0.14
RFX1-207ENST00000589937 TBC1D13Q9NVG8 400 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 DACT1Q9NYF0 836 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 DNAJB4Q9UDY4 337 aa14.15□□□□□ -0.14
RFX1-207ENST00000589937 EYA4O95677 639 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 HOXA11P31270 313 aaPredicted RBP14.14□□□□□ -0.15
RFX1-207ENST00000589937 MCM7P33993 719 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 RFC5P40937 340 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 PLCB3Q01970 1234 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 NBR1Q14596 966 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 TMEM31Q5JXX7 168 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 FERMT3Q86UX7 667 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 ZNF710Q8N1W2 664 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 RNF149Q8NC42 400 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 PPP2R3CQ969Q6 453 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 CPB2Q96IY4 423 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 MTMR9Q96QG7 549 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 MTRQ99707 1265 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 VN1R3Q9BXE9 311 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 ZSWIM4Q9H7M6 989 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 RNF216Q9NWF9 866 aaPredicted RBP14.14□□□□□ -0.15
RFX1-207ENST00000589937 SPG21Q9NZD8 308 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 MUTYHQ9UIF7 546 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 MUC6Q6W4X9 2439 aa14.14□□□□□ -0.15
RFX1-207ENST00000589937 KMT2EQ8IZD2 1858 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 USO1O60763 962 aaKnown RBP14.13□□□□□ -0.15
RFX1-207ENST00000589937 BAG4O95429 457 aaKnown RBP14.13□□□□□ -0.15
RFX1-207ENST00000589937 EOMESO95936 686 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 SP100P23497 879 aaPredicted RBP14.13□□□□□ -0.15
RFX1-207ENST00000589937 COASYQ13057 564 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 CAPSQ13938 189 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 KCNC3Q14003 757 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 TRIM29Q14134 588 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 CSPP1Q1MSJ5 1256 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 AGMOQ6ZNB7 445 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 ZNF280BQ86YH2 543 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 HSD17B14Q9BPX1 270 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 JPH2Q9BR39 696 aaPredicted RBP14.13□□□□□ -0.15
RFX1-207ENST00000589937 TRAIPQ9BWF2 469 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 EIF2AQ9BY44 585 aaKnown RBP14.13□□□□□ -0.15
RFX1-207ENST00000589937 NRDE2Q9H7Z3 1164 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 GPRC5CQ9NQ84 441 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 CHST12Q9NRB3 414 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 PRKAG3Q9UGI9 489 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 PCDHA12Q9UN75 941 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 FAM50BQ9Y247 325 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 LZTS1Q9Y250 596 aa14.13□□□□□ -0.15
RFX1-207ENST00000589937 B4GALT5O43286 388 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 DCXO43602 365 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 TSPAN1O60635 241 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 DKC1O60832 514 aaKnown RBP eCLIP14.12□□□□□ -0.15
RFX1-207ENST00000589937 MED24O75448 989 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 OFD1O75665 1012 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 CA8P35219 290 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 PPM1AP35813 382 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 TECP42680 631 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 SLC11A1P49279 550 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 NOMO2Q5JPE7 1267 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 GLB1LQ6UWU2 654 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 FAM43BQ6ZT52 329 aaPredicted RBP14.12□□□□□ -0.15
RFX1-207ENST00000589937 TMC7Q7Z402 723 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 CDR2LQ86X02 465 aaPredicted RBP14.12□□□□□ -0.15
RFX1-207ENST00000589937 C8orf76Q96K31 380 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 MRPL9Q9BYD2 267 aaKnown RBP14.12□□□□□ -0.15
RFX1-207ENST00000589937 POLR3FQ9H1D9 316 aaPredicted RBP14.12□□□□□ -0.15
RFX1-207ENST00000589937 HES2Q9Y543 173 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 MYH11P35749 1972 aa14.12□□□□□ -0.15
RFX1-207ENST00000589937 MYO10Q9HD67 2058 aa14.11□□□□□ -0.15
RFX1-207ENST00000589937 C2orf71A6NGG8 1288 aa14.11□□□□□ -0.15
RFX1-207ENST00000589937 F8W810 466 aa14.11□□□□□ -0.15
RFX1-207ENST00000589937 GPR37L1O60883 481 aa14.11□□□□□ -0.15
RFX1-207ENST00000589937 DDHD2O94830 711 aa14.11□□□□□ -0.15
RFX1-207ENST00000589937 GLRA2P23416 452 aa14.11□□□□□ -0.15
RFX1-207ENST00000589937 RARRES1P49788 294 aa14.11□□□□□ -0.15
RFX1-207ENST00000589937 CDC42EP1Q00587 391 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms