RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CLCN3P51790 818 aa28.54■■■□□ 2.16
SCAMP4-210ENST00000588555 NKX3-2P78367 333 aa28.54■■■□□ 2.16
SCAMP4-210ENST00000588555 RETREG2Q8NC44 543 aa28.54■■■□□ 2.16
SCAMP4-210ENST00000588555 DEPTORQ8TB45 409 aa28.54■■■□□ 2.16
SCAMP4-210ENST00000588555 CEP350Q5VT06 3117 aa28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 CCND3P30281 292 aaPredicted RBP28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 UBXN1Q04323 297 aa28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 TBX2Q13207 712 aaPredicted RBP28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 KIAA0753Q2KHM9 967 aa28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 VWA3BQ502W6 1294 aa28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 MTHFD1LQ6UB35 978 aa28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 FRMD5Q7Z6J6 570 aa28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 PXYLP1Q8TE99 480 aa28.53■■■□□ 2.16
SCAMP4-210ENST00000588555 TPM2P07951 284 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 CDCA2Q69YH5 1023 aaPredicted RBP28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 SLC39A4Q6P5W5 647 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 METTL13Q8N6R0 699 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 BORCS6Q96GS4 357 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 MKNK1Q9BUB5 465 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 NDST4Q9H3R1 872 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 ANKRD63C9JTQ0 380 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 MYL3P08590 195 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 C6orf222P0C671 652 aaPredicted RBP28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 DNM2P50570 870 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 PURAQ00577 322 aaKnown RBP28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 MFSD10Q14728 455 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 CEP135Q66GS9 1140 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 RAET1EQ8TD07 263 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 CBWD1Q9BRT8 395 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 TMEM134Q9H6X4 195 aa28.52■■■□□ 2.16
SCAMP4-210ENST00000588555 ITIH6Q6UXX5 1313 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 KAT6AQ92794 2004 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 GJB1P08034 283 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 SMIM10L2AP0DMW4 78 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 SMIM10L2BP0DMW5 78 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 RARBP10826 455 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 ADSSP30520 456 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 PSEN2P49810 448 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 CYP2J2P51589 502 aa28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 ARMCX3Q9UH62 379 aaPredicted RBP28.51■■■□□ 2.15
SCAMP4-210ENST00000588555 A0A1W2PQC6 194 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 RHPN2Q8IUC4 686 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 RNF149Q8NC42 400 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 LMBR1Q8WVP7 490 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 SETD4Q9NVD3 440 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 PHLPP2Q6ZVD8 1323 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 NRCAMQ92823 1304 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 RRN3P2A6NIE6 340 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 PES1O00541 588 aaKnown RBP28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 ADAMTS4O75173 837 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 PGK1P00558 417 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 EPB41P11171 864 aaKnown RBP28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 PSMC2P35998 433 aaKnown RBP28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 ARID5BQ14865 1188 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 ARHGEF6Q15052 776 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 CCDC113Q9H0I3 377 aa28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 METTL14Q9HCE5 456 aaKnown RBP28.5■■■□□ 2.15
SCAMP4-210ENST00000588555 K7ERI5 159 aa28.49■■■□□ 2.15
SCAMP4-210ENST00000588555 ASAP2O43150 1006 aa28.49■■■□□ 2.15
SCAMP4-210ENST00000588555 PIGRP01833 764 aa28.49■■■□□ 2.15
SCAMP4-210ENST00000588555 ARMCX5Q6P1M9 558 aa28.49■■■□□ 2.15
SCAMP4-210ENST00000588555 FAM186BQ8IYM0 893 aa28.49■■■□□ 2.15
SCAMP4-210ENST00000588555 KCNF1Q9H3M0 494 aa28.49■■■□□ 2.15
SCAMP4-210ENST00000588555 HSPBP1Q9NZL4 362 aa28.49■■■□□ 2.15
SCAMP4-210ENST00000588555 HNRNPDLO14979 420 aaKnown RBP28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 KPNA6O60684 536 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 EDN1P05305 212 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 SRGAP2CP0DJJ0 459 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 HSPA6P17066 643 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 EFNA5P52803 228 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 GSDMDP57764 484 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 MAP2K1Q02750 393 aaPredicted RBP28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 STRN3Q13033 797 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 GNASQ5JWF2 1037 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 ZNF830Q96NB3 372 aaPredicted RBP28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 KATNAL1Q9BW62 490 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 PCIF1Q9H4Z3 704 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 TSKSQ9UJT2 592 aa28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.48■■■□□ 2.15
SCAMP4-210ENST00000588555 EXOC3O60645 756 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 PRMT2P55345 433 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 ADAM17P78536 824 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 CACTINQ8WUQ7 758 aaKnown RBP28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 ERGIC2Q96RQ1 377 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 XPNPEP3Q9NQH7 507 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 FRMD4BQ9Y2L6 1034 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 MBLAC1A4D2B0 266 aaPredicted RBP28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 TMOD1P28289 359 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 TFDP1Q14186 410 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 HIC1Q14526 733 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 XXYLT1Q8NBI6 393 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 PPP1R13LQ8WUF5 828 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 SPC25Q9HBM1 224 aa28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.47■■■□□ 2.15
SCAMP4-210ENST00000588555 SCN10AQ9Y5Y9 1956 aa28.46■■■□□ 2.15
SCAMP4-210ENST00000588555 MSCO60682 206 aa28.46■■■□□ 2.15
SCAMP4-210ENST00000588555 CHMP4BP1P59074 171 aa28.46■■■□□ 2.15
SCAMP4-210ENST00000588555 POU5F1BQ06416 359 aa28.46■■■□□ 2.15
SCAMP4-210ENST00000588555 NFRKBQ6P4R8 1299 aa28.46■■■□□ 2.15
SCAMP4-210ENST00000588555 ZSWIM2Q8NEG5 633 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms