RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 DHX33Q9H6R0 707 aaKnown RBP25.64■■□□□ 1.7
LSM7-202ENST00000585395 TSHZ2Q9NRE2 1034 aa25.64■■□□□ 1.7
LSM7-202ENST00000585395 BMP2KQ9NSY1 1161 aaPredicted RBP25.64■■□□□ 1.7
LSM7-202ENST00000585395 CHMP5Q9NZZ3 219 aa25.64■■□□□ 1.7
LSM7-202ENST00000585395 SUCLA2Q9P2R7 463 aaPredicted RBP25.64■■□□□ 1.7
LSM7-202ENST00000585395 TTC3P53804 2025 aa25.64■■□□□ 1.69
LSM7-202ENST00000585395 IGKV6-21A0A0C4DH24 114 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 EYA4O95677 639 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 ZSCAN20P17040 1043 aaPredicted RBP25.63■■□□□ 1.69
LSM7-202ENST00000585395 ME1P48163 572 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 ERVK-21P61565 698 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 EMC2Q15006 297 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 MCPH1Q8NEM0 835 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 FBXO22Q8NEZ5 403 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.63■■□□□ 1.69
LSM7-202ENST00000585395 LINC01599Q8WXQ3 324 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 SPATA32Q96LK8 384 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 SAMD11Q96NU1 681 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 ADAM2Q99965 735 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 MMTAG2Q9BU76 263 aaKnown RBP25.63■■□□□ 1.69
LSM7-202ENST00000585395 C1orf112Q9NSG2 853 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 RCOR1Q9UKL0 485 aa25.63■■□□□ 1.69
LSM7-202ENST00000585395 KCNA5P22460 613 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 EIF4BP23588 611 aaKnown RBP25.62■■□□□ 1.69
LSM7-202ENST00000585395 BTG3Q14201 252 aaPredicted RBP25.62■■□□□ 1.69
LSM7-202ENST00000585395 PUS10Q3MIT2 529 aaKnown RBP25.62■■□□□ 1.69
LSM7-202ENST00000585395 PSPC1Q8WXF1 523 aaKnown RBP25.62■■□□□ 1.69
LSM7-202ENST00000585395 NLRP4Q96MN2 994 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 CEP89Q96ST8 783 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 C17orf80Q9BSJ5 609 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 ADAMTS10Q9H324 1103 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 TMX1Q9H3N1 280 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 PCDHB7Q9Y5E2 793 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 NLRC5Q86WI3 1866 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 ADGRA3Q8IWK6 1321 aa25.62■■□□□ 1.69
LSM7-202ENST00000585395 ARID2Q68CP9 1835 aa25.61■■□□□ 1.69
LSM7-202ENST00000585395 ASAP2O43150 1006 aa25.61■■□□□ 1.69
LSM7-202ENST00000585395 DRP2Q13474 957 aa25.61■■□□□ 1.69
LSM7-202ENST00000585395 SP7Q8TDD2 431 aaPredicted RBP25.61■■□□□ 1.69
LSM7-202ENST00000585395 BHMT2Q9H2M3 363 aa25.61■■□□□ 1.69
LSM7-202ENST00000585395 ZBTB39O15060 712 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 USO1O60763 962 aaKnown RBP25.6■■□□□ 1.69
LSM7-202ENST00000585395 DARSP14868 501 aaKnown RBP25.6■■□□□ 1.69
LSM7-202ENST00000585395 SARSP49591 514 aaKnown RBP25.6■■□□□ 1.69
LSM7-202ENST00000585395 NHLH1Q02575 133 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 GRIN1Q05586 938 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 TMEM119Q4V9L6 283 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 PTCRAQ6ISU1 281 aaPredicted RBP25.6■■□□□ 1.69
LSM7-202ENST00000585395 PADI6Q6TGC4 694 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 CCDC73Q6ZRK6 1079 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 RTN4RL1Q86UN2 441 aaPredicted RBP25.6■■□□□ 1.69
LSM7-202ENST00000585395 CLIC6Q96NY7 704 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 IPO9Q96P70 1041 aaKnown RBP25.6■■□□□ 1.69
LSM7-202ENST00000585395 INO80BQ9C086 356 aaPredicted RBP25.6■■□□□ 1.69
LSM7-202ENST00000585395 FAM13BQ9NYF5 915 aa25.6■■□□□ 1.69
LSM7-202ENST00000585395 WDFY4Q6ZS81 3184 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 A0A087WZ62 844 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 SFPQP23246 707 aaKnown RBP eCLIP25.59■■□□□ 1.69
LSM7-202ENST00000585395 CTNNB1P35222 781 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 MXD4Q14582 209 aaPredicted RBP25.59■■□□□ 1.69
LSM7-202ENST00000585395 ECM1Q16610 540 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 PAN2Q504Q3 1202 aaKnown RBP25.59■■□□□ 1.69
LSM7-202ENST00000585395 SLC24A5Q71RS6 500 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 ZNF410Q86VK4 478 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 PNMA5Q96PV4 448 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 FDXACB1Q9BRP7 624 aaPredicted RBP25.59■■□□□ 1.69
LSM7-202ENST00000585395 PYM1Q9BRP8 204 aaKnown RBP25.59■■□□□ 1.69
LSM7-202ENST00000585395 TIPINQ9BVW5 301 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 KCND2Q9NZV8 630 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 STK17AQ9UEE5 414 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 RWDD3Q9Y3V2 267 aa25.59■■□□□ 1.69
LSM7-202ENST00000585395 GRXCR2A6NFK2 248 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 E9PMD0 336 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 MGEA5O60502 916 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 IL9P15248 144 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 CYP11B2P19099 503 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 TFDP1Q14186 410 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 RRAGBQ5VZM2 374 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 TMEM192Q8IY95 271 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 LEO1Q8WVC0 666 aaPredicted RBP25.58■■□□□ 1.69
LSM7-202ENST00000585395 TMEM143Q96AN5 459 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 EPSTI1Q96J88 318 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 RGS18Q9NS28 235 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 COL4A3BPQ9Y5P4 624 aa25.58■■□□□ 1.69
LSM7-202ENST00000585395 RALGAPA2Q2PPJ7 1873 aa25.57■■□□□ 1.68
LSM7-202ENST00000585395 DCXO43602 365 aa25.57■■□□□ 1.68
LSM7-202ENST00000585395 DGKIO75912 1065 aa25.57■■□□□ 1.68
LSM7-202ENST00000585395 SSBP05455 408 aaKnown RBP eCLIP25.57■■□□□ 1.68
LSM7-202ENST00000585395 FGFR4P22455 802 aa25.57■■□□□ 1.68
LSM7-202ENST00000585395 KARSQ15046 597 aaKnown RBP25.57■■□□□ 1.68
LSM7-202ENST00000585395 EPC2Q52LR7 807 aa25.57■■□□□ 1.68
LSM7-202ENST00000585395 PLIN2Q99541 437 aa25.57■■□□□ 1.68
LSM7-202ENST00000585395 COL4A6Q14031 1691 aa25.56■■□□□ 1.68
LSM7-202ENST00000585395 A0A087WWV3 80 aa25.56■■□□□ 1.68
LSM7-202ENST00000585395 CSDE1O75534 798 aaKnown RBP25.56■■□□□ 1.68
LSM7-202ENST00000585395 PLA2G4BP0C869 781 aa25.56■■□□□ 1.68
LSM7-202ENST00000585395 PLCG1P19174 1290 aa25.56■■□□□ 1.68
LSM7-202ENST00000585395 SPECC1Q5M775 1068 aa25.56■■□□□ 1.68
LSM7-202ENST00000585395 SPOUT1Q5T280 376 aaKnown RBP25.56■■□□□ 1.68
LSM7-202ENST00000585395 CATSPER4Q7RTX7 472 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms