RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ZBTB39	O15060	712 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CSDE1	O75534	798 aa	Known RBP	14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	SRGAP2C	P0DJJ0	459 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	FGFR4	P22455	802 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ARL2	P36404	184 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	GATM	P50440	423 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PTEN	P60484	403 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CTC1	Q2NKJ3	1217 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	GLB1L	Q6UWU2	654 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	KSR1	Q8IVT5	923 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	C4orf32	Q8N8J7	132 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	COLGALT1	Q8NBJ5	622 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	UHRF1	Q96T88	793 aa	Predicted RBP	14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ALG13	Q9NP73	1137 aa	Known RBP	14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	UBN1	Q9NPG3	1134 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	FAM105A	Q9NUU6	356 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	STK39	Q9UEW8	545 aa		14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PUF60	Q9UHX1	559 aa	Known RBP	14	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CNTNAP2	Q9UHC6	1331 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	FGF18	O76093	207 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ERLIN2	O94905	339 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ATF7	P17544	494 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	GJB2	P29033	226 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	TOB1	P50616	345 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	KRT17	Q04695	432 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PTGDR	Q13258	359 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CAMK1	Q14012	370 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	MRPL10	Q7Z7H8	261 aa	Known RBP	13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	IGSF22	Q8N9C0	903 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PIGO	Q8TEQ8	1089 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	POF1B	Q8WVV4	589 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ZNF558	Q96NG5	402 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CDCA3	Q99618	268 aa	Predicted RBP	13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	KANSL3	Q9P2N6	904 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	LRWD1	Q9UFC0	647 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	SMC3	Q9UQE7	1217 aa		13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.99	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	MYO7A	Q13402	2215 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708		H3BQV1	296 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	MED24	O75448	989 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	IBSP	P21815	317 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	KCNA5	P22460	613 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	HOXA11	P31270	313 aa	Predicted RBP	13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	KCNQ1	P51787	676 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CLLU1OS	Q5K130	101 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	NOTUM	Q6P988	496 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	KCNT2	Q6UVM3	1135 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	LRRC55	Q6ZSA7	311 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	THNSL1	Q8IYQ7	743 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	MRPS27	Q92552	414 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	NGRN	Q9NPE2	291 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	TLR9	Q9NR96	1032 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	SPG21	Q9NZD8	308 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PCDHB2	Q9Y5E7	798 aa		13.98	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ZMYM2	Q9UBW7	1377 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ARHGEF35	A5YM69	484 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CD2BP2	O95400	341 aa	Known RBP	13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CYP11B2	P19099	503 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	NCL	P19338	710 aa	Known RBP	13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PDC	P20941	246 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	GLRA2	P23416	452 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ALDH7A1	P49419	539 aa	Known RBP	13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	HYAL1	Q12794	435 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CUL4A	Q13619	759 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CAPS	Q13938	189 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	NOMO2	Q5JPE7	1267 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	MCTP1	Q6DN14	999 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	DTHD1	Q6ZMT9	781 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	HACE1	Q8IYU2	909 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	EFHB	Q8N7U6	833 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	RNF169	Q8NCN4	708 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	URGCP	Q8TCY9	931 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	HELQ	Q8TDG4	1101 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PRIMPOL	Q96LW4	560 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	BACH2	Q9BYV9	841 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	C2orf40	Q9H1Z8	148 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	MINDY3	Q9H8M7	445 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PCDHB6	Q9Y5E3	794 aa		13.97	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	GRXCR2	A6NFK2	248 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	INO80B-WBP1	J3KQ70	363 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	FSCN2	O14926	492 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	INPPL1	O15357	1258 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	SLC26A4	O43511	780 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	TSPAN1	O60635	241 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	USO1	O60763	962 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	OFD1	O75665	1012 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	BMP15	O95972	392 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	DNAJB1	P25685	340 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CCT6A	P40227	531 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	MBTD1	Q05BQ5	628 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ADAM15	Q13444	863 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	BMS1	Q14692	1282 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PPP2R5A	Q15172	486 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	KRT79	Q5XKE5	535 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	LARP1B	Q659C4	914 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	POTEG	Q6S5H5	508 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PADI6	Q6TGC4	694 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms