RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 SUCLA2Q9P2R7 463 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-211ENST00000581536 DENND3A2RUS2 1198 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 C9IYK1 514 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 GPR182O15218 404 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 NEMFO60524 1076 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 BMPR1AP36894 532 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 TECP42680 631 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 SARSP49591 514 aaKnown RBP10.86□□□□□ -0.67
TOP3A-211ENST00000581536 TOB1P50616 345 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-211ENST00000581536 FAM189BP81408 668 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 GPM6BQ13491 265 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 BTG3Q14201 252 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-211ENST00000581536 SAFBQ15424 915 aaKnown RBP eCLIP10.86□□□□□ -0.67
TOP3A-211ENST00000581536 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
TOP3A-211ENST00000581536 RHPN2Q8IUC4 686 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 C4orf19Q8IY42 314 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 C4orf32Q8N8J7 132 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 CEP170P1Q96L14 293 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 TBC1D32Q96NH3 1257 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 HSD17B14Q9BPX1 270 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 LXNQ9BS40 222 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-211ENST00000581536 PCDHB7Q9Y5E2 793 aa10.86□□□□□ -0.67
TOP3A-211ENST00000581536 MRPL42Q9Y6G3 142 aaKnown RBP10.86□□□□□ -0.67
TOP3A-211ENST00000581536 H3BNC9 293 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 GRM6O15303 877 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 NR1I2O75469 434 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 SRGAP2CP0DJJ0 459 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 DARSP14868 501 aaKnown RBP10.85□□□□□ -0.67
TOP3A-211ENST00000581536 YWHABP31946 246 aaKnown RBP10.85□□□□□ -0.67
TOP3A-211ENST00000581536 HMGN5P82970 282 aaKnown RBP10.85□□□□□ -0.67
TOP3A-211ENST00000581536 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 SLC24A5Q71RS6 500 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 PIGOQ8TEQ8 1089 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 PRPF31Q8WWY3 499 aaKnown RBP10.85□□□□□ -0.67
TOP3A-211ENST00000581536 KDM4CQ9H3R0 1056 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 DHX33Q9H6R0 707 aaKnown RBP10.85□□□□□ -0.67
TOP3A-211ENST00000581536 ZSWIM4Q9H7M6 989 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 ALG13Q9NP73 1137 aaKnown RBP10.85□□□□□ -0.67
TOP3A-211ENST00000581536 LRFN2Q9ULH4 789 aa10.85□□□□□ -0.67
TOP3A-211ENST00000581536 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 BRWD1Q9NSI6 2320 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 CSPG5O95196 566 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 SPATA31C1P0DKV0 1188 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 FGFR1P11362 822 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 DNAJB1P25685 340 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 GJB2P29033 226 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 CTNNB1P35222 781 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 DNM2P50570 870 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 COPS2P61201 443 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 TTC38Q5R3I4 469 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 BLOC1S3Q6QNY0 202 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 LRRC55Q6ZSA7 311 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 NOSTRINQ8IVI9 506 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 CLP1Q92989 425 aaKnown RBP10.84□□□□□ -0.67
TOP3A-211ENST00000581536 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 GCOM2Q9BZD3 368 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-211ENST00000581536 MINDY3Q9H8M7 445 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 POLD4Q9HCU8 107 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 LMCD1Q9NZU5 365 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 PCDHB6Q9Y5E3 794 aa10.84□□□□□ -0.67
TOP3A-211ENST00000581536 TBKBP1A7MCY6 615 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 DKC1O60832 514 aaKnown RBP eCLIP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 MED24O75448 989 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 STAG3L1P0CL83 205 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 U2AF2P26368 475 aaKnown RBP eCLIP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 KCNQ1P51787 676 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 POLGP54098 1239 aaPredicted RBP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 LAMTOR4Q0VGL1 99 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 GNL2Q13823 731 aaKnown RBP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 CAMK1Q14012 370 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 IL17AQ16552 155 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 ECM1Q16610 540 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 ODR4Q5SWX8 454 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 MAEAQ7L5Y9 396 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 CATSPER3Q86XQ3 398 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 ECHDC2Q86YB7 292 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 CMTR2Q8IYT2 770 aaKnown RBP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 KLHL23Q8NBE8 558 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 NLRP4Q96MN2 994 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 SCLT1Q96NL6 688 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 SAMD11Q96NU1 681 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 CASD1Q96PB1 797 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 ASB2Q96Q27 587 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 UPF2Q9HAU5 1272 aaKnown RBP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 XPNPEP1Q9NQW7 623 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 C1orf112Q9NSG2 853 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 TYW1Q9NV66 732 aaKnown RBP10.83□□□□□ -0.68
TOP3A-211ENST00000581536 THEGQ9P2T0 379 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 PLAGL2Q9UPG8 496 aa10.83□□□□□ -0.68
TOP3A-211ENST00000581536 C5orf67F2Z3F1 127 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 RB1P06400 928 aa10.82□□□□□ -0.68
TOP3A-211ENST00000581536 BMP1P13497 986 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms